BLASTX nr result

ID: Coptis25_contig00006817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006817
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604010.1| NADH dehydrogenase [Medicago truncatula] gi|...    69   4e-09
ref|XP_002268405.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    69   4e-09
ref|XP_002512999.1| NADH dehydrogenase, putative [Ricinus commun...    69   4e-09
ref|NP_001237226.1| uncharacterized protein LOC100527776 [Glycin...    67   9e-09
ref|NP_001235802.1| uncharacterized protein LOC100305723 [Glycin...    67   9e-09

>ref|XP_003604010.1| NADH dehydrogenase [Medicago truncatula] gi|355493058|gb|AES74261.1|
            NADH dehydrogenase [Medicago truncatula]
            gi|388522703|gb|AFK49413.1| unknown [Medicago truncatula]
          Length = 117

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +3

Query: 984  VPWAPGGSKFTRNPAPPAGVEIVYDFGREDND 1079
            VPWAPGGSKFTRNPAPP G+EI+YD+GREDN+
Sbjct: 86   VPWAPGGSKFTRNPAPPQGIEIIYDYGREDNN 117


>ref|XP_002268405.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit
            9 [Vitis vinifera] gi|297744724|emb|CBI37986.3| unnamed
            protein product [Vitis vinifera]
          Length = 115

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 984  VPWAPGGSKFTRNPAPPAGVEIVYDFGREDN 1076
            VPWAPGGSKFTRNP PPAG+EI+YD+GREDN
Sbjct: 84   VPWAPGGSKFTRNPTPPAGIEIIYDYGREDN 114


>ref|XP_002512999.1| NADH dehydrogenase, putative [Ricinus communis]
            gi|223548010|gb|EEF49502.1| NADH dehydrogenase, putative
            [Ricinus communis]
          Length = 115

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +3

Query: 984  VPWAPGGSKFTRNPAPPAGVEIVYDFGREDND 1079
            VPWAPGGSKFTRNP PP+GVEIVY++GREDND
Sbjct: 84   VPWAPGGSKFTRNPTPPSGVEIVYNYGREDND 115


>ref|NP_001237226.1| uncharacterized protein LOC100527776 [Glycine max]
            gi|255633184|gb|ACU16948.1| unknown [Glycine max]
          Length = 115

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 984  VPWAPGGSKFTRNPAPPAGVEIVYDFGREDND 1079
            VPWAPGGSKFTRNP PP G+EIVY++GREDND
Sbjct: 84   VPWAPGGSKFTRNPTPPQGIEIVYNYGREDND 115


>ref|NP_001235802.1| uncharacterized protein LOC100305723 [Glycine max]
            gi|255626425|gb|ACU13557.1| unknown [Glycine max]
          Length = 115

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 984  VPWAPGGSKFTRNPAPPAGVEIVYDFGREDND 1079
            VPWAPGGSKFTRNP PP G+EIVY++GREDND
Sbjct: 84   VPWAPGGSKFTRNPTPPQGIEIVYNYGREDND 115


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