BLASTX nr result

ID: Coptis25_contig00006815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006815
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303615.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-52
ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267...   148   2e-52
emb|CBI34409.3| unnamed protein product [Vitis vinifera]              148   2e-52
ref|XP_002509881.1| conserved hypothetical protein [Ricinus comm...   145   3e-52
ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|1...   142   6e-52

>ref|XP_002303615.1| predicted protein [Populus trichocarpa] gi|222841047|gb|EEE78594.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  144 bits (362), Expect(2) = 1e-52
 Identities = 68/90 (75%), Positives = 81/90 (90%)
 Frame = +1

Query: 295 GATAAWVLFELLQYHLLTLVCHCLILSLAILFLWSNATTFINKSPPHIPNVSLPEKPILE 474
           GATA WVLFELL+ HLLTLVC+ LIL+LA+LFLWSNA+TFINKSPPHIP V +PE+P+L+
Sbjct: 82  GATAIWVLFELLECHLLTLVCYFLILALALLFLWSNASTFINKSPPHIPEVRIPEEPVLQ 141

Query: 475 FVSALRIEINYCLSVLRDIASGRELKKFLS 564
             +ALRIEIN+  SVLRDIASGR+LKKFL+
Sbjct: 142 IAAALRIEINWAFSVLRDIASGRDLKKFLT 171



 Score = 88.6 bits (218), Expect(2) = 1e-52
 Identities = 42/66 (63%), Positives = 47/66 (71%)
 Frame = +2

Query: 35  DDEKDNLKKEKPPXXXXXXVMSGINRLFGRQKPVHKVLGGGKPADVFLWRNKKISAGVLG 214
           D   D+      P      + S I R+FGR+KPVHKVLGGGKPAD+FLWRNKKISAGVLG
Sbjct: 22  DKSSDSDSDHGKPKSESDSLKSKIYRIFGREKPVHKVLGGGKPADIFLWRNKKISAGVLG 81

Query: 215 GATAAW 232
           GATA W
Sbjct: 82  GATAIW 87


>ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267262 [Vitis vinifera]
          Length = 256

 Score =  148 bits (373), Expect(2) = 2e-52
 Identities = 68/90 (75%), Positives = 81/90 (90%)
 Frame = +1

Query: 295 GATAAWVLFELLQYHLLTLVCHCLILSLAILFLWSNATTFINKSPPHIPNVSLPEKPILE 474
           GATA W+LFELL+YHLLTLVCHC IL+LAILFLWSNATTFINK+PPHIP V +PE P+L+
Sbjct: 88  GATAVWILFELLEYHLLTLVCHCSILALAILFLWSNATTFINKAPPHIPEVHIPEDPVLQ 147

Query: 475 FVSALRIEINYCLSVLRDIASGRELKKFLS 564
           F SALRIEIN   ++LR++ASG++LKKFLS
Sbjct: 148 FASALRIEINRGFTLLRNVASGKDLKKFLS 177



 Score = 83.6 bits (205), Expect(2) = 2e-52
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +2

Query: 104 INRLFGRQKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAAW 232
           + R+FGR+KPVHKVLGGGKPADV LWRNKKISAGVLGGATA W
Sbjct: 51  VYRIFGREKPVHKVLGGGKPADVVLWRNKKISAGVLGGATAVW 93


>emb|CBI34409.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  148 bits (373), Expect(2) = 2e-52
 Identities = 68/90 (75%), Positives = 81/90 (90%)
 Frame = +1

Query: 295 GATAAWVLFELLQYHLLTLVCHCLILSLAILFLWSNATTFINKSPPHIPNVSLPEKPILE 474
           GATA W+LFELL+YHLLTLVCHC IL+LAILFLWSNATTFINK+PPHIP V +PE P+L+
Sbjct: 84  GATAVWILFELLEYHLLTLVCHCSILALAILFLWSNATTFINKAPPHIPEVHIPEDPVLQ 143

Query: 475 FVSALRIEINYCLSVLRDIASGRELKKFLS 564
           F SALRIEIN   ++LR++ASG++LKKFLS
Sbjct: 144 FASALRIEINRGFTLLRNVASGKDLKKFLS 173



 Score = 83.6 bits (205), Expect(2) = 2e-52
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +2

Query: 104 INRLFGRQKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAAW 232
           + R+FGR+KPVHKVLGGGKPADV LWRNKKISAGVLGGATA W
Sbjct: 47  VYRIFGREKPVHKVLGGGKPADVVLWRNKKISAGVLGGATAVW 89


>ref|XP_002509881.1| conserved hypothetical protein [Ricinus communis]
           gi|223549780|gb|EEF51268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 260

 Score =  145 bits (366), Expect(2) = 3e-52
 Identities = 66/89 (74%), Positives = 80/89 (89%)
 Frame = +1

Query: 298 ATAAWVLFELLQYHLLTLVCHCLILSLAILFLWSNATTFINKSPPHIPNVSLPEKPILEF 477
           ATA WVLFEL++YHLLTL+CH  IL+LAILFLWSNA+TFINKSPPHIP V +PE+P+L+ 
Sbjct: 93  ATAVWVLFELIEYHLLTLICHGFILALAILFLWSNASTFINKSPPHIPEVHIPEEPVLQV 152

Query: 478 VSALRIEINYCLSVLRDIASGRELKKFLS 564
            +ALR+EINY  ++LRDIASGR+LKKFLS
Sbjct: 153 AAALRMEINYAFAILRDIASGRDLKKFLS 181



 Score = 85.5 bits (210), Expect(2) = 3e-52
 Identities = 42/66 (63%), Positives = 47/66 (71%)
 Frame = +2

Query: 35  DDEKDNLKKEKPPXXXXXXVMSGINRLFGRQKPVHKVLGGGKPADVFLWRNKKISAGVLG 214
           D + D   K K P      + S I RLFGR+KPVH VLGGGKPAD+FLWRNKK+SAGVLG
Sbjct: 33  DSDNDEKLKPKSPSSPSS-IKSKIYRLFGREKPVHHVLGGGKPADIFLWRNKKVSAGVLG 91

Query: 215 GATAAW 232
            ATA W
Sbjct: 92  FATAVW 97


>ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|118482989|gb|ABK93406.1|
           unknown [Populus trichocarpa]
           gi|222846762|gb|EEE84309.1| predicted protein [Populus
           trichocarpa]
          Length = 254

 Score =  142 bits (357), Expect(2) = 6e-52
 Identities = 67/90 (74%), Positives = 80/90 (88%)
 Frame = +1

Query: 295 GATAAWVLFELLQYHLLTLVCHCLILSLAILFLWSNATTFINKSPPHIPNVSLPEKPILE 474
           GATA WVLFELL+Y+L+TLVCHCLIL+LA+LFLWSNA+TFINKSPP IP V +PE+P+L+
Sbjct: 86  GATAIWVLFELLEYNLVTLVCHCLILALALLFLWSNASTFINKSPPRIPEVCIPEEPVLQ 145

Query: 475 FVSALRIEINYCLSVLRDIASGRELKKFLS 564
             +ALRIEIN   SVLRDIASGR+LK FL+
Sbjct: 146 TAAALRIEINQGFSVLRDIASGRDLKNFLT 175



 Score = 87.8 bits (216), Expect(2) = 6e-52
 Identities = 41/45 (91%), Positives = 42/45 (93%)
 Frame = +2

Query: 98  SGINRLFGRQKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAAW 232
           S I RLFGR+KPVHKVLGGGKPADVFLWRNKKISAGVLGGATA W
Sbjct: 47  SKIYRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIW 91


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