BLASTX nr result

ID: Coptis25_contig00006812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006812
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   154   4e-35
ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...   153   8e-35
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   144   3e-32
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...   141   2e-31
ref|NP_001053369.1| Os04g0527700 [Oryza sativa Japonica Group] g...   141   3e-31

>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  154 bits (388), Expect = 4e-35
 Identities = 77/128 (60%), Positives = 92/128 (71%), Gaps = 8/128 (6%)
 Frame = -3

Query: 523 QPH-----SMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCF 359
           +PH     SME+L+AEA A+G+ E ESL+AK +KALECPC+A LR+GPCG  F ++F CF
Sbjct: 18  EPHFSSSPSMESLLAEAVAYGNDENESLEAKAQKALECPCIADLRNGPCGVQFSESFLCF 77

Query: 358 LKSTSEEKGSDCVHPFVALQNCIKLNPDAFSKDAVDSVXXXXXXXXXXXXKISPPTWSTE 179
           LKSTSEEKGSDCVHPFVALQNCIK NP+AFSKD ++              KI PP WS E
Sbjct: 78  LKSTSEEKGSDCVHPFVALQNCIKANPNAFSKDILEEAEEKKEEEPAQEYKIIPPIWSRE 137

Query: 178 ---PKAKL 164
              PK+KL
Sbjct: 138 SQSPKSKL 145


>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  153 bits (386), Expect = 8e-35
 Identities = 79/120 (65%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
 Frame = -3

Query: 514 SMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKSTSEEK 335
           S++ALIAEA AFGD E ESLDAK +KALECPC+A LRSGPCGT F +AF CFLKS++EEK
Sbjct: 22  SLDALIAEAAAFGDDENESLDAKAQKALECPCIAHLRSGPCGTQFSEAFVCFLKSSAEEK 81

Query: 334 GSDCVHPFVALQNCIKLNPDAFSKDAV-DSVXXXXXXXXXXXXKISPPTWSTE--PKAKL 164
           GSDCVHPFVALQNCIK NP+AFSKD + D              KI PP W+ E  PK KL
Sbjct: 82  GSDCVHPFVALQNCIKANPNAFSKDILDDDDEVKKEEEPTQEYKIIPPIWAAEKGPKQKL 141


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  144 bits (364), Expect = 3e-32
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 8/124 (6%)
 Frame = -3

Query: 520 PHSMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKSTSE 341
           P SME+LIAEA A+G+   ESLDAK  +ALECPC+A LR GPCG  F DAF CF KST+E
Sbjct: 30  PPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGIQFSDAFLCFFKSTAE 89

Query: 340 EKGSDCVHPFVALQNCIKLNPDAFSKDAVD--------SVXXXXXXXXXXXXKISPPTWS 185
           EKGSDCVHPFVALQ+CIK NP+AFSKD +D                      ++ PP+WS
Sbjct: 90  EKGSDCVHPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQDYRVIPPSWS 149

Query: 184 TEPK 173
            EP+
Sbjct: 150 REPQ 153


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  141 bits (356), Expect = 2e-31
 Identities = 70/124 (56%), Positives = 83/124 (66%), Gaps = 8/124 (6%)
 Frame = -3

Query: 520 PHSMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKSTSE 341
           P SME+LIAEA A+G+   ESLDAK  +ALECPC+A LR G CG  F DAF CF KST+E
Sbjct: 30  PPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGSCGIQFSDAFLCFFKSTAE 89

Query: 340 EKGSDCVHPFVALQNCIKLNPDAFSKDAVD--------SVXXXXXXXXXXXXKISPPTWS 185
           EKGSDCVHPFVALQ+CIK NP+AFSKD +D                      ++ PP+WS
Sbjct: 90  EKGSDCVHPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQDYRVVPPSWS 149

Query: 184 TEPK 173
            EP+
Sbjct: 150 REPQ 153


>ref|NP_001053369.1| Os04g0527700 [Oryza sativa Japonica Group]
           gi|38344449|emb|CAE05655.2| OSJNBa0038O10.21 [Oryza
           sativa Japonica Group] gi|113564940|dbj|BAF15283.1|
           Os04g0527700 [Oryza sativa Japonica Group]
           gi|116310970|emb|CAH67906.1| OSIGBa0115K01-H0319F09.12
           [Oryza sativa Indica Group] gi|215706375|dbj|BAG93231.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218195249|gb|EEC77676.1| hypothetical protein
           OsI_16721 [Oryza sativa Indica Group]
           gi|222629243|gb|EEE61375.1| hypothetical protein
           OsJ_15538 [Oryza sativa Japonica Group]
          Length = 151

 Score =  141 bits (355), Expect = 3e-31
 Identities = 67/122 (54%), Positives = 86/122 (70%)
 Frame = -3

Query: 529 AQQPHSMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKS 350
           A  P S+EAL AEA +F +   ES+D K++KAL+CPCVA L++GPCG+ F+DAF CFLKS
Sbjct: 31  APAPSSLEALAAEAMSFDEDGNESIDVKVQKALDCPCVAELKNGPCGSQFVDAFSCFLKS 90

Query: 349 TSEEKGSDCVHPFVALQNCIKLNPDAFSKDAVDSVXXXXXXXXXXXXKISPPTWSTEPKA 170
           T EEKGSDCV PF+ALQ+CIK+NP+AFSK+ ++              K+  P WS E K 
Sbjct: 91  TEEEKGSDCVKPFIALQDCIKINPEAFSKEILEE-EENDEEAEKSNLKVRAPAWSRESKP 149

Query: 169 KL 164
           KL
Sbjct: 150 KL 151


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