BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006804
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633330.1| PREDICTED: mitochondrial import inner membra...   376   e-102
ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...   367   3e-99
gb|ACG39671.1| import inner membrane translocase subunit TIM50 [...   358   1e-96
ref|NP_001142162.1| uncharacterized protein LOC100274327 [Zea ma...   354   2e-95
ref|XP_002458533.1| hypothetical protein SORBIDRAFT_03g035300 [S...   350   4e-94

>ref|XP_003633330.1| PREDICTED: mitochondrial import inner membrane translocase subunit
            TIM50-like [Vitis vinifera] gi|296085020|emb|CBI28435.3|
            unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  376 bits (965), Expect = e-102
 Identities = 188/303 (62%), Positives = 236/303 (77%), Gaps = 4/303 (1%)
 Frame = -1

Query: 1144 KMNSWNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNSVKQKKNKDASSLEKF 965
            K +S  +LK+  + TLAG +    Y +YAY+ DEVD  TK  R S K     +ASSL+KF
Sbjct: 65   KKSSSAFLKFAIFGTLAGATAAAGYASYAYTLDEVDEKTKAFRTSAKYTVGDNASSLDKF 124

Query: 964  QALLYSAAMTVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLGVMTLVVD 785
            QALLYSAAMTVPAK I++YL+LRR IE +IR + EP S+KLLPDL P  +   + TLV+D
Sbjct: 125  QALLYSAAMTVPAKAIELYLDLRRPIEEQIRGFAEPSSEKLLPDLHPLEQH--IFTLVLD 182

Query: 784  LNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPICERLNQKG 605
            LNETL+YSDWKRERGWRTFKRPGVDAFLE LAQFYEIVV+SDQQ  M+VDP+ ERL+QKG
Sbjct: 183  LNETLLYSDWKRERGWRTFKRPGVDAFLEHLAQFYEIVVYSDQQS-MYVDPVLERLDQKG 241

Query: 604  TITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEG 425
             I YRL RTAT+YQ+GKHY+DLSKLNRDP+K++YVSGHA+E+ LQP+NC+ IKPWK+E  
Sbjct: 242  CIRYRLSRTATRYQDGKHYRDLSKLNRDPSKILYVSGHAIESCLQPENCVPIKPWKVEAD 301

Query: 424  DTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEF----HERQRKLVDEQRKTKKTI 257
            DT LLDL+PFLE++A  RP DIR VL SY+G D+ATEF     + QR+++++++  +   
Sbjct: 302  DTVLLDLIPFLEYVARHRPADIRPVLASYQGRDIATEFIARSKDHQRRMLEQRQHGR--F 359

Query: 256  WSR 248
            W R
Sbjct: 360  WQR 362


>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
            TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
            unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  367 bits (942), Expect = 3e-99
 Identities = 185/300 (61%), Positives = 230/300 (76%), Gaps = 4/300 (1%)
 Frame = -1

Query: 1135 SWNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNSVKQKKNKDASSLEKFQAL 956
            SWN+LK+G    L     T  Y +YAY+ DEVD  TK  R S K     DAS+ +KF+AL
Sbjct: 77   SWNFLKFGLIGALTVGVATAGYASYAYTLDEVDEKTKAFRASAKDSVEDDASAFDKFKAL 136

Query: 955  LYSAAMTVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNE 776
             Y++A+TVPAK ID+YL++RR IE ++  +TEP SDKLLPDL P  +   V+TLV+DLNE
Sbjct: 137  AYTSAVTVPAKAIDLYLDMRRLIEEQVHGFTEPLSDKLLPDLHPMEQH--VLTLVLDLNE 194

Query: 775  TLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPICERLNQKGTIT 596
            TLIYSDWKR+RGWRTFKRPGVDAFLE LAQFYEIVV+SDQ   M+VDP+ ERL++K  I 
Sbjct: 195  TLIYSDWKRDRGWRTFKRPGVDAFLEHLAQFYEIVVYSDQLS-MYVDPVVERLDKKQCIR 253

Query: 595  YRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDTA 416
            +RL R AT+YQ+GKHY+DLSKLNRDPAK++YVSGHALET+LQP+NC++IKPWKLEE DT 
Sbjct: 254  HRLSRAATRYQDGKHYRDLSKLNRDPAKILYVSGHALETSLQPENCVQIKPWKLEEDDTQ 313

Query: 415  LLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHER----QRKLVDEQRKTKKTIWSR 248
            LLDL+PFLE++A  RP DIR VL SY+G D+A EF ER    QR++  +++K     W R
Sbjct: 314  LLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEFIERSKEYQRRM--QEQKQHGRFWRR 371


>gb|ACG39671.1| import inner membrane translocase subunit TIM50 [Zea mays]
          Length = 352

 Score =  358 bits (919), Expect = 1e-96
 Identities = 177/303 (58%), Positives = 230/303 (75%), Gaps = 3/303 (0%)
 Frame = -1

Query: 1147 TKMNSWNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNSVKQKKNKDASSLEK 968
            T  N W  LK+ A+A ++   G   Y +YAYS +EVD +T+++R   KQ   +DAS  E+
Sbjct: 54   TARNPWGALKFAAFAAVSAAVGGTGYVSYAYSLEEVDQMTRELRKKSKQPIPEDASGFER 113

Query: 967  FQALLYSAAMTVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLGVMTLVV 788
            FQA+ YSAAM VP   I++YL++R  IE +IR ++EP SDKLLPDLAP+ +   V+TLV+
Sbjct: 114  FQAMAYSAAMKVPVAAIEVYLDVRSQIEDQIRGFSEPVSDKLLPDLAPQEQH--VLTLVL 171

Query: 787  DLNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPICERLNQK 608
            DLNETL+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ   M+VDP+ +RL+ K
Sbjct: 172  DLNETLVYSDWKRERGWRTFKRPGVDAFLEHLGRFYEIVVYSDQLS-MYVDPVVDRLDPK 230

Query: 607  GTITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEE 428
            G I +RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQP+N +EIKPWKLE 
Sbjct: 231  GNIRHRLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLEN 290

Query: 427  GDTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTI 257
             DT LLDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + I
Sbjct: 291  DDTQLLDLIPFLEYVAMARPSDIRAVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-I 349

Query: 256  WSR 248
            W R
Sbjct: 350  WRR 352


>ref|NP_001142162.1| uncharacterized protein LOC100274327 [Zea mays]
            gi|194707412|gb|ACF87790.1| unknown [Zea mays]
            gi|413952358|gb|AFW85007.1| import inner membrane
            translocase subunit TIM50 [Zea mays]
          Length = 359

 Score =  354 bits (909), Expect = 2e-95
 Identities = 175/303 (57%), Positives = 229/303 (75%), Gaps = 3/303 (0%)
 Frame = -1

Query: 1147 TKMNSWNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNSVKQKKNKDASSLEK 968
            T    W  LK+ A+A ++   G   Y +YAYS +EVD +T+++R   KQ   +DAS  E+
Sbjct: 61   TARKPWGALKFAAFAAVSTAVGGTGYVSYAYSLEEVDQMTRELRKKSKQPIPEDASGFER 120

Query: 967  FQALLYSAAMTVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLGVMTLVV 788
            FQA+ YSAAM VP   I++Y+++R  IE +IR ++EP SDKLLPDLAP+ +   V+TLV+
Sbjct: 121  FQAMAYSAAMKVPVAAIEVYMDVRSQIEDQIRGFSEPVSDKLLPDLAPQEQH--VLTLVL 178

Query: 787  DLNETLIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPICERLNQK 608
            DLNETL+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ   M+VDP+ +RL+ K
Sbjct: 179  DLNETLVYSDWKRERGWRTFKRPGVDAFLEHLGRFYEIVVYSDQLS-MYVDPVVDRLDPK 237

Query: 607  GTITYRLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEE 428
            G I +RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQP+N +EIKPWKLE 
Sbjct: 238  GNIRHRLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLEN 297

Query: 427  GDTALLDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTI 257
             DT LLDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + I
Sbjct: 298  DDTQLLDLIPFLEYVAMARPSDIRAVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-I 356

Query: 256  WSR 248
            W R
Sbjct: 357  WRR 359


>ref|XP_002458533.1| hypothetical protein SORBIDRAFT_03g035300 [Sorghum bicolor]
            gi|241930508|gb|EES03653.1| hypothetical protein
            SORBIDRAFT_03g035300 [Sorghum bicolor]
          Length = 360

 Score =  350 bits (898), Expect = 4e-94
 Identities = 174/298 (58%), Positives = 225/298 (75%), Gaps = 3/298 (1%)
 Frame = -1

Query: 1132 WNYLKYGAYATLAGLSGTVAYHTYAYSADEVDSITKDIRNSVKQKKNKDASSLEKFQALL 953
            W  LK+ A   ++   G  AY +YAYS DEVD +T+++R   KQ   +DAS  E+FQA+ 
Sbjct: 67   WGALKFAALTAVSAAVGGTAYVSYAYSLDEVDQMTRELRKKSKQPIPEDASGFERFQAMA 126

Query: 952  YSAAMTVPAKCIDIYLELRRSIEGKIREYTEPYSDKLLPDLAPELKGLGVMTLVVDLNET 773
            YS+AM VP   I+ YL++R  IE +IR ++EP SDKLLPDL P+ +   V+TLV+DLNET
Sbjct: 127  YSSAMKVPVAAIEAYLDVRSQIEDQIRGFSEPVSDKLLPDLLPQEQH--VLTLVLDLNET 184

Query: 772  LIYSDWKRERGWRTFKRPGVDAFLERLAQFYEIVVFSDQQEGMFVDPICERLNQKGTITY 593
            L+YSDWKRERGWRTFKRPGVDAFLE L +FYEIVV+SDQ   M+VDP+ +RL+ KG I +
Sbjct: 185  LVYSDWKRERGWRTFKRPGVDAFLEHLGKFYEIVVYSDQLS-MYVDPVVDRLDPKGNIRH 243

Query: 592  RLGRTATKYQNGKHYKDLSKLNRDPAKVIYVSGHALETALQPDNCLEIKPWKLEEGDTAL 413
            RL R ATKY+NGKHY+DLSKLNR+PA+V+Y+S HA E++LQP+N +EIKPWKLE  DT L
Sbjct: 244  RLSRVATKYENGKHYRDLSKLNRNPAQVLYISAHAKESSLQPENSVEIKPWKLESDDTQL 303

Query: 412  LDLVPFLEFLAYRRPQDIRKVLESYRGCDVATEFHERQR---KLVDEQRKTKKTIWSR 248
            LDL+PFLE++A  RP DIR VL SY+  D+A EF ER +   + + EQ+K+ + IW R
Sbjct: 304  LDLIPFLEYVAMVRPSDIRSVLASYQSGDIAAEFIERSKEHQRRMQEQKKSGR-IWRR 360