BLASTX nr result

ID: Coptis25_contig00006794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006794
         (1922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279257.1| PREDICTED: ethylene-responsive transcription...   132   4e-28
ref|XP_004169638.1| PREDICTED: ethylene-responsive transcription...   118   6e-24
ref|XP_004140859.1| PREDICTED: ethylene-responsive transcription...   118   6e-24
ref|XP_002531632.1| DNA binding protein, putative [Ricinus commu...   112   5e-22
emb|CAN69165.1| hypothetical protein VITISV_015325 [Vitis vinifera]   112   5e-22

>ref|XP_002279257.1| PREDICTED: ethylene-responsive transcription factor ERF118 [Vitis
            vinifera]
          Length = 320

 Score =  132 bits (331), Expect = 4e-28
 Identities = 114/360 (31%), Positives = 169/360 (46%), Gaps = 8/360 (2%)
 Frame = -3

Query: 1458 MPGLQRQLLNQDKVFXXXXXXXXSNLRDLESQQKMRKIRVICCXXXXXXXXXXXXXSCEX 1279
            MP  +RQ + QD  F           +++ S  KMRKIRVIC                  
Sbjct: 1    MPEPRRQPMIQDMPFK--------RAKEICSDFKMRKIRVICYDPEATDSSSSEDEGGIS 52

Query: 1278 XXXXXXXXXXREFTVPTASS------EAESSYQDSNYSGKALIKVAKFLNRKIEXXXXXX 1117
                      RE  +P A S      E ESS QDSN  GK   K  +FL +         
Sbjct: 53   KREKRGKRIVREINLPVAGSPQSNAIETESSCQDSNNGGKNPKK--RFLRKP-------- 102

Query: 1116 XXXXXXXXGVRQRKWGKWAAEIRDPIRQVRVWLGTFDTAEDASEAYQRARKKLELEMDSI 937
                    GVRQRKWGKWAAEIRDP R VRVWLGT++T E+A++AY+   K+LE E  + 
Sbjct: 103  --PSSKYRGVRQRKWGKWAAEIRDPFRGVRVWLGTYNTPEEAAKAYE--SKRLEFEAMAA 158

Query: 936  GYLEKGNNXXXXXXXXXXXXXXXXTGSVTHS-SISEDTEXXXXXXXXXSVLDVSTTAVSL 760
               +  N                 + S +H+ ++S+D++         SVL++ T+    
Sbjct: 159  SANKSQN----------VSSSVAVSQSQSHNPAVSDDSDSLLSHTSPSSVLELETS---- 204

Query: 759  SSAQNSSMKPEDSTDAAKSSDELWQQYEHHPSQQQEVTTDIFMEPMVTSTNEQDLDIGFE 580
            +S  N      D+T     ++ +      + ++QQ+  +D   EP++     Q+L++  E
Sbjct: 205  TSHYNGGGHGTDTTKEGVGTNLI----HANGAEQQKPISDFAEEPLMAPPIGQELNMEAE 260

Query: 579  LDSFL-MNDFGQVFDDFKGLDDIPFEGFEEDCGIDDILKLDLSLGAEELSWIDEHLNIPC 403
             +SF   N++G++ DDF  LDD+   GF+ +    D+   D  LG +E +W+DE LNI C
Sbjct: 261  FESFFDDNNWGRILDDFNCLDDLRIFGFDNE-EPSDLPDFDFDLGNDEFAWMDEPLNISC 319


>ref|XP_004169638.1| PREDICTED: ethylene-responsive transcription factor ERF118-like
            [Cucumis sativus]
          Length = 239

 Score =  118 bits (295), Expect = 6e-24
 Identities = 90/286 (31%), Positives = 129/286 (45%), Gaps = 12/286 (4%)
 Frame = -3

Query: 1224 SSEAESSYQDSNYSGKALIKVAKFLNRKIEXXXXXXXXXXXXXXGVRQRKWGKWAAEIRD 1045
            ++   SS QDSN  GK      +   +++               GVRQRKWGKWAAEIRD
Sbjct: 4    TTSTPSSSQDSNNGGKN----QELKKKRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRD 59

Query: 1044 PIRQVRVWLGTFDTAEDASEAYQRARKKLELEMDSIGYLEKGNNXXXXXXXXXXXXXXXX 865
            P +  R+WLGT++TAE+AS+AY+   K+LE E       +  NN                
Sbjct: 60   PFKGARIWLGTYNTAEEASQAYE--SKRLEFESALAAAPKSSNNIVI------------- 104

Query: 864  TGSVTHSSISEDTEXXXXXXXXXSVLDVSTTAVSLSSAQNSSMKPEDSTDAAKSSDELWQ 685
                + SS SE+ E            + S + VS +S   + ++ E S+      DE   
Sbjct: 105  ---TSSSSSSEENE------------EESDSVVSQTSPAAAILEMETSSSVLIKEDE--- 146

Query: 684  QYEHHPSQQQEVTTDIFMEPMVTSTNEQD----LDIGF-ELDSFLMNDFGQVFDDFKGLD 520
                    ++ + T++  E  V      D    +++G  ELD F M+D GQ  DDF  +D
Sbjct: 147  --------EEMIDTNLINELQVPDLGFVDEGMEINLGLPELDPFFMDDIGQFLDDFSAMD 198

Query: 519  DIPFEGFEE-------DCGIDDILKLDLSLGAEELSWIDEHLNIPC 403
            DI   GF++       DC  DD    D+S       W+DE LN+PC
Sbjct: 199  DIQIYGFDDDVPSCLPDCDFDDFGNDDIS------CWVDEALNVPC 238


>ref|XP_004140859.1| PREDICTED: ethylene-responsive transcription factor ERF118-like
            [Cucumis sativus]
          Length = 318

 Score =  118 bits (295), Expect = 6e-24
 Identities = 90/286 (31%), Positives = 129/286 (45%), Gaps = 12/286 (4%)
 Frame = -3

Query: 1224 SSEAESSYQDSNYSGKALIKVAKFLNRKIEXXXXXXXXXXXXXXGVRQRKWGKWAAEIRD 1045
            ++   SS QDSN  GK      +   +++               GVRQRKWGKWAAEIRD
Sbjct: 83   TTSTPSSSQDSNNGGKN----QELKKKRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRD 138

Query: 1044 PIRQVRVWLGTFDTAEDASEAYQRARKKLELEMDSIGYLEKGNNXXXXXXXXXXXXXXXX 865
            P +  R+WLGT++TAE+AS+AY+   K+LE E       +  NN                
Sbjct: 139  PFKGARIWLGTYNTAEEASQAYE--SKRLEFESALAAAPKSSNNIVI------------- 183

Query: 864  TGSVTHSSISEDTEXXXXXXXXXSVLDVSTTAVSLSSAQNSSMKPEDSTDAAKSSDELWQ 685
                + SS SE+ E            + S + VS +S   + ++ E S+      DE   
Sbjct: 184  ---TSSSSSSEENE------------EESDSVVSQTSPAAAILEMETSSSVLIKEDE--- 225

Query: 684  QYEHHPSQQQEVTTDIFMEPMVTSTNEQD----LDIGF-ELDSFLMNDFGQVFDDFKGLD 520
                    ++ + T++  E  V      D    +++G  ELD F M+D GQ  DDF  +D
Sbjct: 226  --------EEMIDTNLINELQVPDLGFVDEGMEINLGLPELDPFFMDDIGQFLDDFSAMD 277

Query: 519  DIPFEGFEE-------DCGIDDILKLDLSLGAEELSWIDEHLNIPC 403
            DI   GF++       DC  DD    D+S       W+DE LN+PC
Sbjct: 278  DIQIYGFDDDVPSCLPDCDFDDFGNDDIS------CWVDEALNVPC 317


>ref|XP_002531632.1| DNA binding protein, putative [Ricinus communis]
            gi|223528750|gb|EEF30760.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 358

 Score =  112 bits (279), Expect = 5e-22
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 14/286 (4%)
 Frame = -3

Query: 1230 TASSEAESSYQDSNYSGKALIKVAKFLNRKIEXXXXXXXXXXXXXXG--------VRQRK 1075
            ++S E ESS QDSN SGK   K  + L  K                         VRQRK
Sbjct: 80   SSSVEPESSCQDSNNSGKTPNKKRRVLGAKTPKPATTPTTTAAATTKSALKKPVGVRQRK 139

Query: 1074 WGKWAAEIRDPIRQVRVWLGTFDTAEDASEAYQRARKKLELEMDSIGYLEKGNNXXXXXX 895
            WGKWAAEIR+P+ +VR WLGT++T E+A++AY+   KK E +  ++   EK  N      
Sbjct: 140  WGKWAAEIRNPLTKVRTWLGTYNTLEEAAQAYE--AKKREYDAMTMAASEKSQN---ISS 194

Query: 894  XXXXXXXXXXTGSVTHSSISEDTEXXXXXXXXXSVLDVSTTAVSLSSAQNSSMKPEDSTD 715
                       G +   + S+DTE         SVL++  +AV  S+A N+    ED  D
Sbjct: 195  SVEESNKTTKHGGLVAVTTSDDTESVLSHTSPSSVLELDASAV--SNANNA----EDPFD 248

Query: 714  AAKSSDELWQQYEHHPSQQQEVTTDIFMEPMVTSTN-EQDLDIGFELDSFLMNDFGQVFD 538
                 ++    ++       ++    FM+  + S + +QDL++G    + L++DFGQ++D
Sbjct: 249  LVIKEED---GFDTDVIGDLDIPDLSFMDEQLGSCSIDQDLNLGLNFGN-LIDDFGQLYD 304

Query: 537  DFKGLDDIPFEGFEEDCGIDD-----ILKLDLSLGAEELSWIDEHL 415
            D+ G++D+      E CG+D      +   D   G EE +++D  L
Sbjct: 305  DYCGIEDL------EICGLDSDEPSALPDYDFEFGNEEFTYLDHQL 344


>emb|CAN69165.1| hypothetical protein VITISV_015325 [Vitis vinifera]
          Length = 444

 Score =  112 bits (279), Expect = 5e-22
 Identities = 94/286 (32%), Positives = 136/286 (47%), Gaps = 12/286 (4%)
 Frame = -3

Query: 1221 SEAESSYQDSNYSGKALIKVAKFLNRKIEXXXXXXXXXXXXXXGVRQRKWGKWAAEIRDP 1042
            S AE+S   SN  GK        L+ K +              GVR+RKWGK+AAEIRDP
Sbjct: 185  SSAETSPHISNNGGK--------LSTKFDSKIQKTPRSSSIYKGVRRRKWGKYAAEIRDP 236

Query: 1041 IRQVRVWLGTFDTAEDASEAYQRARKKLELEMDSIGYLEKGNNXXXXXXXXXXXXXXXXT 862
            IR VR+WLGT++TAE+A++AYQ  +    LE D+I   +K  N                 
Sbjct: 237  IRGVRMWLGTYNTAEEAAKAYQTKK----LEFDTILGSKKLKN-----KHSSPSSSAVTC 287

Query: 861  GSVTHSSISEDTEXXXXXXXXXSVLDVSTTAVSLSSAQNSSMKPEDSTDAAKSSDELWQQ 682
             S    S SE+T          SVL++S +A   S    +S+K +D+   A  +D+  Q 
Sbjct: 288  SSRQKPSSSEETNGLFSHPSPSSVLEISRSA---SIGSGNSVKEDDN---AMRNDKEEQP 341

Query: 681  YEHHPSQQQEVTTD------------IFMEPMVTSTNEQDLDIGFELDSFLMNDFGQVFD 538
                      +T D            +  EP+      Q+L++GF+ +S   N+F + FD
Sbjct: 342  ISSLTGPASSITEDNAMEEDKVPAASLLEEPLFFPPFNQELNLGFDDNSLFGNNFDEFFD 401

Query: 537  DFKGLDDIPFEGFEEDCGIDDILKLDLSLGAEELSWIDEHLNIPCL 400
            D   ++ +P  GF ED   + +   D  L  +EL+W+DE LNI CL
Sbjct: 402  DL-DMEGLPMCGF-EDGATNGLPNFDFELD-KELAWVDETLNIACL 444


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