BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006793
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...    91   1e-16
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...    86   2e-15
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    86   2e-15
gb|ABB29949.1| unknown [Solanum tuberosum]                             86   3e-15
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...    82   5e-14

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
           [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
           protein product [Vitis vinifera]
          Length = 410

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 40/56 (71%), Positives = 48/56 (85%)
 Frame = -3

Query: 285 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 118
           V+VSRC+ERVFG  QWQNL+SKL TWRGNIANV +TI+ NK++ED S  MQGLT+R
Sbjct: 355 VLVSRCSERVFGQQQWQNLRSKLLTWRGNIANVINTIQANKISEDGSQAMQGLTIR 410


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           M-like [Cucumis sativus]
          Length = 410

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -3

Query: 285 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 118
           VIVSRCT+RVFG +QW+ L++KLTTWRGNIANV  TI  NK+ ED S  MQGL +R
Sbjct: 355 VIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/56 (67%), Positives = 45/56 (80%)
 Frame = -3

Query: 285 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 118
           VIVSRCT+RVFG +QW+ L++KLTTWRGNIANV  TI  NK+ ED S  MQGL +R
Sbjct: 362 VIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 417


>gb|ABB29949.1| unknown [Solanum tuberosum]
          Length = 410

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = -3

Query: 285 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 118
           VIVSRCTERVFG++QWQ L++KL TWRGNIA V ST++ NK+ ED++  MQGL +R
Sbjct: 355 VIVSRCTERVFGVHQWQELRTKLVTWRGNIAGVISTVQANKITEDSTQAMQGLAIR 410


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
           gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
           putative [Ricinus communis]
          Length = 412

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/56 (66%), Positives = 43/56 (76%)
 Frame = -3

Query: 285 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEVNKVAEDASHGMQGLTVR 118
           VIVS CTERVFG +QWQ L+SKL TWR N+ NV +TI+ NKV ED S  MQGL +R
Sbjct: 357 VIVSSCTERVFGQHQWQKLRSKLATWRDNVTNVINTIQANKVTEDGSQAMQGLMIR 412