BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006792
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...    92   6e-17
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...    87   1e-15
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    87   1e-15
gb|ABB29949.1| unknown [Solanum tuberosum]                             87   1e-15
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...    83   2e-14

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
           [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
           protein product [Vitis vinifera]
          Length = 410

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = -3

Query: 293 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEANKVAEDDSHGMQGLTVR 126
           V+VSRC+ERVFG  QWQNL+SKL TWRGNIANV +TI+ANK++ED S  MQGLT+R
Sbjct: 355 VLVSRCSERVFGQQQWQNLRSKLLTWRGNIANVINTIQANKISEDGSQAMQGLTIR 410


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           M-like [Cucumis sativus]
          Length = 410

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = -3

Query: 293 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEANKVAEDDSHGMQGLTVR 126
           VIVSRCT+RVFG +QW+ L++KLTTWRGNIANV  TI ANK+ ED S  MQGL +R
Sbjct: 355 VIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = -3

Query: 293 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEANKVAEDDSHGMQGLTVR 126
           VIVSRCT+RVFG +QW+ L++KLTTWRGNIANV  TI ANK+ ED S  MQGL +R
Sbjct: 362 VIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 417


>gb|ABB29949.1| unknown [Solanum tuberosum]
          Length = 410

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/56 (67%), Positives = 47/56 (83%)
 Frame = -3

Query: 293 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEANKVAEDDSHGMQGLTVR 126
           VIVSRCTERVFG++QWQ L++KL TWRGNIA V ST++ANK+ ED +  MQGL +R
Sbjct: 355 VIVSRCTERVFGVHQWQELRTKLVTWRGNIAGVISTVQANKITEDSTQAMQGLAIR 410


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
           gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
           putative [Ricinus communis]
          Length = 412

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -3

Query: 293 VIVSRCTERVFGMNQWQNLKSKLTTWRGNIANVRSTIEANKVAEDDSHGMQGLTVR 126
           VIVS CTERVFG +QWQ L+SKL TWR N+ NV +TI+ANKV ED S  MQGL +R
Sbjct: 357 VIVSSCTERVFGQHQWQKLRSKLATWRDNVTNVINTIQANKVTEDGSQAMQGLMIR 412