BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006784
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...    89   5e-16
gb|ABP98986.1| putative ubiquitin associated/TS-N domain-contain...    83   3e-14
ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...    82   3e-14
ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing...    82   5e-14

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/82 (56%), Positives = 55/82 (67%), Gaps = 9/82 (10%)
 Frame = -2

Query: 219 LKFLFSSRKRSILPGICGVLASLLYHSNIFGIRHIKFPEFVSSFFSQLCWPTLGGSSPSA 40
           L+ L SS KRSILPGICG+LA  LY  N F IR +KFPEF+SSFFS+L  P  G SS +A
Sbjct: 161 LQLLLSSWKRSILPGICGILAGSLYRLNFFHIRKMKFPEFISSFFSRLSSPATGSSSTAA 220

Query: 39  SGRNVI---------EVEGNYP 1
             RN++         +VEGNYP
Sbjct: 221 PSRNILGNAPSYAGRQVEGNYP 242


>gb|ABP98986.1| putative ubiquitin associated/TS-N domain-containing protein
           [Hieracium piloselloides]
          Length = 289

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 5/77 (6%)
 Frame = -2

Query: 219 LKFLFSSRKRSILPGICGVLASLLYHSNIFGIRHIKFPEFVSSFFSQLCWPTLGGSSPSA 40
           L+ LFSS KRS++PG+CG+LA  LY  N+  IR +KFP+F++SFFS+L  P++G +SP  
Sbjct: 161 LQLLFSSWKRSLIPGLCGILAGTLYRLNVLRIRRVKFPDFIASFFSRLSLPSVGSTSPVP 220

Query: 39  SGRN-----VIEVEGNY 4
             RN       +VEGNY
Sbjct: 221 PARNAPSFAARQVEGNY 237


>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
           gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
           thaliana] gi|21553945|gb|AAM63026.1| unknown
           [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1|
           At3g56740 [Arabidopsis thaliana]
           gi|110735889|dbj|BAE99920.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1|
           Ubiquitin-associated (UBA) protein [Arabidopsis
           thaliana]
          Length = 293

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = -2

Query: 219 LKFLFSSRKRSILPGICGVLASLLYHSNIFGIRHIKFPEFVSSFFSQLCWPTLGGSSPSA 40
           ++ L SS KRSI PGICG++A  LY  NI GIR  KFPEFV+SFFS+L +P+ G S P A
Sbjct: 161 VQLLLSSWKRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPA 220

Query: 39  SGRNVI 22
             RN++
Sbjct: 221 PSRNIV 226


>ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 11/75 (14%)
 Frame = -2

Query: 219 LKFLFSSRKRSILPGICGVLASLLYHSNIFGIRHIKFPEFVSSFFSQLCWPTLG------ 58
           ++ L SS KRSILPGICG+LA  LY  N+FGIR  KFPEF++SFFS+L WP+ G      
Sbjct: 161 VQLLLSSWKRSILPGICGILAGSLYRLNLFGIRKAKFPEFIASFFSRLSWPSTGSPRGAT 220

Query: 57  -----GSSPSASGRN 28
                GS+PS +GR+
Sbjct: 221 SRNVTGSAPSYAGRH 235


>ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297322218|gb|EFH52639.1|
           ubiquitin-associated /TS-N domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = -2

Query: 219 LKFLFSSRKRSILPGICGVLASLLYHSNIFGIRHIKFPEFVSSFFSQLCWPTLGGSSPSA 40
           ++ L SS KRSI PGICG++A  LY  NI GIR  KFPEFV+SFFS+L +P+ G S P A
Sbjct: 161 VQLLLSSWKRSIFPGICGIIAGPLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPA 220

Query: 39  SGRNVI 22
             RN++
Sbjct: 221 PSRNIV 226