BLASTX nr result

ID: Coptis25_contig00006776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006776
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274987.1| PREDICTED: CDK-activating kinase assembly fa...   207   3e-51
ref|NP_001238600.1| uncharacterized protein LOC100305654 [Glycin...   197   3e-48
ref|XP_004146669.1| PREDICTED: uncharacterized protein LOC101207...   195   2e-47
ref|XP_002528409.1| cak assembly factor, putative [Ricinus commu...   195   2e-47
ref|XP_003618273.1| CDK-activating kinase assembly factor MAT1 [...   193   8e-47

>ref|XP_002274987.1| PREDICTED: CDK-activating kinase assembly factor MAT1 [Vitis
           vinifera] gi|297743691|emb|CBI36574.3| unnamed protein
           product [Vitis vinifera]
          Length = 189

 Score =  207 bits (528), Expect = 3e-51
 Identities = 116/196 (59%), Positives = 134/196 (68%), Gaps = 4/196 (2%)
 Frame = +3

Query: 231 MVVGSGANNSYAKEISIRKRISNIFNKREDDFPSLRDYNDYLEEVEDLTFNLIEGINVPA 410
           MVV S    ++ KEI+IR+RIS+IFNKREDDFPSLR+YNDYLEEVED+T NLIEGI+VPA
Sbjct: 1   MVVVSAT--TFNKEIAIRRRISSIFNKREDDFPSLREYNDYLEEVEDMTTNLIEGIDVPA 58

Query: 411 IETRIAKYQEENGDQIMNXXXXXXXXXXXXXXXSKGGIAHTDXXXXXXXXXXXXXXXXXX 590
           IE +IAKYQEEN +QIM                SKG    TD                  
Sbjct: 59  IEVKIAKYQEENAEQIMINRARKAEELAAAMAASKGQPVQTDTDGATSQSSQAGIGAGAP 118

Query: 591 MQYAPAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA----RAGGWSLE 758
             YAP +PG   GQPRPTGMAPQP+PVG G +  G+A DDEEMM+LRA    +AGGWS+E
Sbjct: 119 GHYAPTVPG---GQPRPTGMAPQPIPVGVGPE--GYAADDEEMMKLRAERGGKAGGWSIE 173

Query: 759 LSKRRAIEEAFGSMWI 806
           LSKRRAIEEAFGS+WI
Sbjct: 174 LSKRRAIEEAFGSIWI 189


>ref|NP_001238600.1| uncharacterized protein LOC100305654 [Glycine max]
           gi|255626207|gb|ACU13448.1| unknown [Glycine max]
          Length = 188

 Score =  197 bits (502), Expect = 3e-48
 Identities = 110/193 (56%), Positives = 129/193 (66%), Gaps = 1/193 (0%)
 Frame = +3

Query: 231 MVVGSGANNSYAKEISIRKRISNIFNKREDDFPSLRDYNDYLEEVEDLTFNLIEGINVPA 410
           MVV S   N + KEI+IR+RI++IFNKREDDFPSLR+YNDYLEEVED+TFNLIEGI+V  
Sbjct: 1   MVVSS--TNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVSD 58

Query: 411 IETRIAKYQEENGDQIMNXXXXXXXXXXXXXXXSKGGIAHTDXXXXXXXXXXXXXXXXXX 590
           IE +IAKYQEEN +QIM                SKG  A TD                  
Sbjct: 59  IEAKIAKYQEENAEQIMINRARKAEELAAAMAASKGQPAQTDDDSATNQNSQAGFGAVPQ 118

Query: 591 MQYAPAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA-RAGGWSLELSK 767
            QYAP   G   GQPRPTGMAPQP+P+G G DM GFA DDEE   LR  RAGGWS ++S+
Sbjct: 119 GQYAPTFAG---GQPRPTGMAPQPLPLGGG-DMPGFAGDDEETKRLRTERAGGWSGDISR 174

Query: 768 RRAIEEAFGSMWI 806
           +RA+EEAFGS+W+
Sbjct: 175 KRALEEAFGSIWV 187


>ref|XP_004146669.1| PREDICTED: uncharacterized protein LOC101207027 [Cucumis sativus]
           gi|449503153|ref|XP_004161860.1| PREDICTED:
           uncharacterized LOC101207027 [Cucumis sativus]
          Length = 189

 Score =  195 bits (496), Expect = 2e-47
 Identities = 108/196 (55%), Positives = 131/196 (66%), Gaps = 4/196 (2%)
 Frame = +3

Query: 231 MVVGSGANNSYAKEISIRKRISNIFNKREDDFPSLRDYNDYLEEVEDLTFNLIEGINVPA 410
           MV+ S  +NS++KE+SIRKRI++IFNKRE+DF SLR+YNDYLEEVED+TFNLIEGI+V A
Sbjct: 1   MVISS--SNSHSKEVSIRKRIASIFNKREEDFSSLREYNDYLEEVEDMTFNLIEGIDVQA 58

Query: 411 IETRIAKYQEENGDQIMNXXXXXXXXXXXXXXXSKGGIAHTDXXXXXXXXXXXXXXXXXX 590
           IE +IA+YQEEN +QIM                SKG  A  D                  
Sbjct: 59  IEAKIARYQEENAEQIMINRARKAEEYAAALAASKGIPAQADNDGAADQSFQAGLSTGTQ 118

Query: 591 MQYAPAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA----RAGGWSLE 758
            QYAP   G   GQPRPTG   QPVP+G+G DM G+  DDEEM+ LRA    RAGGWS+E
Sbjct: 119 GQYAPTFAG---GQPRPTG---QPVPLGAGPDMQGYGLDDEEMLRLRAERGGRAGGWSVE 172

Query: 759 LSKRRAIEEAFGSMWI 806
            S++RA+EEAFGS+WI
Sbjct: 173 FSRKRALEEAFGSIWI 188


>ref|XP_002528409.1| cak assembly factor, putative [Ricinus communis]
           gi|223532197|gb|EEF34002.1| cak assembly factor,
           putative [Ricinus communis]
          Length = 185

 Score =  195 bits (495), Expect = 2e-47
 Identities = 107/190 (56%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
 Frame = +3

Query: 249 ANNSYAKEISIRKRISNIFNKREDDFPSLRDYNDYLEEVEDLTFNLIEGINVPAIETRIA 428
           +N+S  KEISIR+RISNIFNKREDDFPSL++YNDYLEEVED+ FNL+ G++V AIE +IA
Sbjct: 5   SNSSSHKEISIRRRISNIFNKREDDFPSLKEYNDYLEEVEDMIFNLVAGVDVAAIEEKIA 64

Query: 429 KYQEENGDQIMNXXXXXXXXXXXXXXXSKGGIAHTDXXXXXXXXXXXXXXXXXXMQYAPA 608
           +YQ+EN +QIM                SKG +A TD                   QYAP+
Sbjct: 65  EYQKENAEQIMINQARKAEELAAAVAASKGHLAPTDTDMNPQAGIAIEPG-----QYAPS 119

Query: 609 MPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRA----RAGGWSLELSKRRA 776
           + G   GQPRPTGMAPQPVP+G G DM G+  DDEEMM LRA    RAGGWS ELS++R+
Sbjct: 120 VAG---GQPRPTGMAPQPVPLG-GLDMQGYPFDDEEMMRLRAERGSRAGGWSAELSRKRS 175

Query: 777 IEEAFGSMWI 806
           +EEAF S+WI
Sbjct: 176 LEEAFSSIWI 185


>ref|XP_003618273.1| CDK-activating kinase assembly factor MAT1 [Medicago truncatula]
           gi|355493288|gb|AES74491.1| CDK-activating kinase
           assembly factor MAT1 [Medicago truncatula]
          Length = 185

 Score =  193 bits (490), Expect = 8e-47
 Identities = 105/192 (54%), Positives = 129/192 (67%)
 Frame = +3

Query: 231 MVVGSGANNSYAKEISIRKRISNIFNKREDDFPSLRDYNDYLEEVEDLTFNLIEGINVPA 410
           MV+ S   N + KEI+IRKRI++IFNKREDDFPSL++YNDYLEEVED+TFNLIEGI+V A
Sbjct: 1   MVISS--TNPHYKEIAIRKRIASIFNKREDDFPSLKEYNDYLEEVEDMTFNLIEGIDVAA 58

Query: 411 IETRIAKYQEENGDQIMNXXXXXXXXXXXXXXXSKGGIAHTDXXXXXXXXXXXXXXXXXX 590
           IE RIAKYQEEN +QIM                SKG  A TD                  
Sbjct: 59  IEARIAKYQEENSEQIMINRARKAEELAAAMATSKGQPAQTDNDDANPNSQAGFGAVPQG 118

Query: 591 MQYAPAMPGIAFGQPRPTGMAPQPVPVGSGHDMHGFATDDEEMMELRARAGGWSLELSKR 770
            QYAP + G   GQPRPTGM PQP+P+G G    G+  ++EE +  +ARAGGWS+E+S++
Sbjct: 119 -QYAPTIAG---GQPRPTGMGPQPLPLGGGD--AGYVVENEETLRRQARAGGWSIEISRK 172

Query: 771 RAIEEAFGSMWI 806
           RA+EEAFGS+WI
Sbjct: 173 RALEEAFGSIWI 184


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