BLASTX nr result

ID: Coptis25_contig00006770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006770
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281560.1| PREDICTED: uncharacterized protein LOC100243...   275   1e-71
ref|XP_004145350.1| PREDICTED: uncharacterized protein LOC101213...   268   1e-69
emb|CAN82373.1| hypothetical protein VITISV_027624 [Vitis vinifera]   263   5e-68
ref|XP_002519146.1| conserved hypothetical protein [Ricinus comm...   261   3e-67
ref|XP_002309260.1| predicted protein [Populus trichocarpa] gi|2...   257   4e-66

>ref|XP_002281560.1| PREDICTED: uncharacterized protein LOC100243476 [Vitis vinifera]
           gi|297741368|emb|CBI32499.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  275 bits (703), Expect = 1e-71
 Identities = 131/201 (65%), Positives = 159/201 (79%), Gaps = 4/201 (1%)
 Frame = +2

Query: 209 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQLSPCDRRLNLAGSKA 388
           ++V E +DTND++DPCSDA +K  DGFTFGL FS+K+SFFFNQTQLSPCDRRL+L+ + +
Sbjct: 18  VLVAEADDTNDVFDPCSDAKVKRFDGFTFGLAFSTKDSFFFNQTQLSPCDRRLSLSSTNS 77

Query: 389 QLTVFRPKVDEISLLTINSTSFSPSASGGYMVAFAGRKYAARSLPVFVADDTNIISSFTL 568
           QL VFRPKVDEISLLT+NST+F+P ++GGYMVAFAGRKYAARS PV VAD  + I+SFTL
Sbjct: 78  QLAVFRPKVDEISLLTVNSTNFNPISNGGYMVAFAGRKYAARSTPVLVADGQHTITSFTL 137

Query: 569 VLEFKKGTLQNLFWNSNGCDSCSG----ICLNQTDCATPVSNCTGKAGSPNCTTSIQLAF 736
           VLEFKKGTLQ+ +W   GC  CS     +CLN+ DCA   S+C  + GS +C  SIQL F
Sbjct: 138 VLEFKKGTLQSFYWKKFGCSKCSKSSAFVCLNEQDCAVKSSHCKNQGGSIDCNISIQLIF 197

Query: 737 AGTDKNDKVLNSWYEVKNLGQ 799
           +GTDK    LNSWYE+KNL Q
Sbjct: 198 SGTDKKLVALNSWYELKNLRQ 218


>ref|XP_004145350.1| PREDICTED: uncharacterized protein LOC101213680 [Cucumis sativus]
           gi|449471268|ref|XP_004153260.1| PREDICTED:
           uncharacterized protein LOC101222204 [Cucumis sativus]
           gi|449502395|ref|XP_004161628.1| PREDICTED:
           uncharacterized LOC101222204 [Cucumis sativus]
          Length = 235

 Score =  268 bits (686), Expect = 1e-69
 Identities = 127/198 (64%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
 Frame = +2

Query: 209 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQLSPCDRRLNLAGSKA 388
           ++V+EG DTND+Y PC D+ I+ SDGFTFG+ FSSKESFF +Q Q SPCD RL+LA   A
Sbjct: 17  LLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDTRLSLASKMA 76

Query: 389 QLTVFRPKVDEISLLTINSTSFSPSASGGYMVAFAGRKYAARSLPVFVADDTNIISSFTL 568
           QL VFRPKVD++S LTINS++F+P+ +GGYMVAFAG+KYAARSLPV + D++N I+SFTL
Sbjct: 77  QLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMITDNSNTITSFTL 136

Query: 569 VLEFKKGTLQNLFWNSNGCDSCSG---ICLNQTDCATPVSNCTGKAGSPNCTTSIQLAFA 739
           VLEF++G LQNLFW   GCD CSG   +C++  DCA P S C    GS +C   IQLAF+
Sbjct: 137 VLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSVDCNLGIQLAFS 196

Query: 740 GTDKNDKVLNSWYEVKNL 793
           GTDKN +VLNSWYEV NL
Sbjct: 197 GTDKNLEVLNSWYEVDNL 214


>emb|CAN82373.1| hypothetical protein VITISV_027624 [Vitis vinifera]
          Length = 249

 Score =  263 bits (672), Expect = 5e-68
 Identities = 130/212 (61%), Positives = 157/212 (74%), Gaps = 15/212 (7%)
 Frame = +2

Query: 209 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQLSPCDRRLNLAGSKA 388
           + V E +DTN ++DPCSDA +K  DGFTFGL FS+K+SFFFNQTQLSPCDRRL+L+ + +
Sbjct: 16  VFVAEADDTNXVFDPCSDAKVKRFDGFTFGLAFSTKDSFFFNQTQLSPCDRRLSLSSTNS 75

Query: 389 QLTVFRPKVDEISLLTINSTSFSP-----------SASGGYMVAFAGRKYAARSLPVFVA 535
           QL VFRPKVDEISLLT+NST+F+P            ++GGYMVAFAGRKYAARS PV VA
Sbjct: 76  QLAVFRPKVDEISLLTVNSTNFNPVWFNDFLVFSQISNGGYMVAFAGRKYAARSTPVLVA 135

Query: 536 DDTNIISSFTLVLEFKKGTLQNLFWNSNGCDSCSG----ICLNQTDCATPVSNCTGKAGS 703
           D  + I+SFTLVLEFKKGTLQ+ +W   GC  CS     +CLN+ DCA   S+C  + GS
Sbjct: 136 DGQHTITSFTLVLEFKKGTLQSFYWKKFGCSKCSKSSAFVCLNEQDCAVKSSHCKNQGGS 195

Query: 704 PNCTTSIQLAFAGTDKNDKVLNSWYEVKNLGQ 799
            +C  SIQL F+GTDK    LNSWYE+KNL Q
Sbjct: 196 IDCNISIQLIFSGTDKKLVALNSWYELKNLRQ 227


>ref|XP_002519146.1| conserved hypothetical protein [Ricinus communis]
           gi|223541809|gb|EEF43357.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  261 bits (666), Expect = 3e-67
 Identities = 128/199 (64%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
 Frame = +2

Query: 209 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQTQLSPCDRRLNLAGSKA 388
           +M     D+ND++ PCSDA I+ SDGFTFGL FSSKESFFF+  QLSPCD RL L    A
Sbjct: 18  IMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCDSRLALFSKMA 77

Query: 389 QLTVFRPKVDEISLLTINSTSFSPSASGGYMVAFAGRKYAARSLPVFVADDTNIISSFTL 568
           QL VFRPKVDEISLLTINS++F+P  SGGYMVAFAGRKYAARS PV VAD+  I++SFTL
Sbjct: 78  QLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVADNGIIVTSFTL 137

Query: 569 VLEFKKGTLQNLFWNSNGCDSCSG--ICLNQTDCATPVSNCTGKAGSPNCTTSIQLAFAG 742
           VLEF++G LQNL+W S GCD CS   +CLN  DCA   S C    G  +C   +QL F+G
Sbjct: 138 VLEFQQGILQNLYWKSFGCDKCSKDFVCLNGKDCAVHNSKCRSNGGHIDCNLGVQLTFSG 197

Query: 743 TDKNDKVLNSWYEVKNLGQ 799
           TDKN + LNSWYEV NL Q
Sbjct: 198 TDKNLETLNSWYEVSNLRQ 216


>ref|XP_002309260.1| predicted protein [Populus trichocarpa] gi|222855236|gb|EEE92783.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  257 bits (656), Expect = 4e-66
 Identities = 122/202 (60%), Positives = 154/202 (76%), Gaps = 5/202 (2%)
 Frame = +2

Query: 209 MMVIEGNDTNDIYDPCSDASIKTSDGFTFGLVFSSKESFFFNQT-QLSPCDRRLNLAGSK 385
           ++ ++ ++TN +Y PC+D +++ SDGFTF + FSS ++FFFN T QLSPCD RL+L    
Sbjct: 23  LLPVQSDNTNHVYSPCADTTVQVSDGFTFSIAFSSSKAFFFNSTLQLSPCDSRLSLTSQN 82

Query: 386 AQLTVFRPKVDEISLLTINSTSFSPSASGGYMVAFAGRKYAARSLPVFVADDTNIISSFT 565
           +Q++VFRPKVDEISLLTIN++SFSP   GGYMVAFAGRKYAARSLP FVA+ T  ++SFT
Sbjct: 83  SQISVFRPKVDEISLLTINTSSFSPGDFGGYMVAFAGRKYAARSLPAFVANSTYTVTSFT 142

Query: 566 LVLEFKKGTLQNLFWNSNGCDSCSG----ICLNQTDCATPVSNCTGKAGSPNCTTSIQLA 733
           LVLEFKKG LQNL+W  +GC  CSG    +CLN  DCA   S+C    GS +C+  IQLA
Sbjct: 143 LVLEFKKGRLQNLYWKRDGCAKCSGNSKFVCLNNQDCAIRTSSCIKNGGSVDCSLGIQLA 202

Query: 734 FAGTDKNDKVLNSWYEVKNLGQ 799
           F+GTDK+   LNSWYEV+NL Q
Sbjct: 203 FSGTDKHFSALNSWYEVENLRQ 224


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