BLASTX nr result

ID: Coptis25_contig00006769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006769
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265030.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   324   3e-86
ref|NP_001054392.1| Os05g0103200 [Oryza sativa Japonica Group] g...   314   2e-83
ref|XP_002439092.1| hypothetical protein SORBIDRAFT_09g000350 [S...   314   2e-83
ref|XP_002514874.1| peptidyl-prolyl cis-trans isomerase, putativ...   312   9e-83
gb|AFW75093.1| putative peptidyl-prolyl cis-trans isomerase fami...   310   4e-82

>ref|XP_002265030.2| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2,
            chloroplastic-like [Vitis vinifera]
            gi|296088703|emb|CBI38153.3| unnamed protein product
            [Vitis vinifera]
          Length = 262

 Score =  324 bits (830), Expect = 3e-86
 Identities = 168/218 (77%), Positives = 181/218 (83%), Gaps = 8/218 (3%)
 Frame = -1

Query: 1000 SSSGSFFS---RFVPASSS-----QRRTGFFTSTRAAAAAEDVQVQSKVTNKVYFDISIG 845
            SSS SF S   R VP +SS     +RRTG  +S RA+A  ++  +QSKVT KVYFDISIG
Sbjct: 47   SSSSSFVSGSFRLVPLTSSLNPCSRRRTGLLSSLRASA--QEAPLQSKVTQKVYFDISIG 104

Query: 844  NPTGKFVGRIVIGLFADDVPQTAENFRALCTGEKGFGYQGSSFHRVIKDFMIQXXXXXXX 665
            NP GK VGRIVIGLF DDVPQTAENFRALCTGEKGFGY+GS+FHRVIKDFMIQ       
Sbjct: 105  NPVGKVVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKG 164

Query: 664  XXXXXKSIYGRTFKDENFKLAHVGPGTLSMANAGPNTNGSQFFICTVKTPWLDERHVVFG 485
                 KSIYGRTFKDENFKLAHVGPG +SMANAGPNTNGSQFFICTVKTPWLD+RHVVFG
Sbjct: 165  NGTGGKSIYGRTFKDENFKLAHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFG 224

Query: 484  QVLEGMDIVKLIESQETDRGDRPKKKVVISECGELPTV 371
            QVLEGMDIVKL+ESQETDRGDRP+KKVVISECGELP V
Sbjct: 225  QVLEGMDIVKLVESQETDRGDRPRKKVVISECGELPMV 262


>ref|NP_001054392.1| Os05g0103200 [Oryza sativa Japonica Group]
           gi|46359893|gb|AAS88825.1| putative peptidylprolyl
           isomerase [Oryza sativa Japonica Group]
           gi|113577943|dbj|BAF16306.1| Os05g0103200 [Oryza sativa
           Japonica Group] gi|125550497|gb|EAY96206.1| hypothetical
           protein OsI_18093 [Oryza sativa Indica Group]
           gi|215679064|dbj|BAG96494.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215692585|dbj|BAG88005.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737587|dbj|BAG96717.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629875|gb|EEE62007.1| hypothetical protein
           OsJ_16789 [Oryza sativa Japonica Group]
          Length = 250

 Score =  314 bits (805), Expect = 2e-83
 Identities = 157/208 (75%), Positives = 170/208 (81%)
 Frame = -1

Query: 994 SGSFFSRFVPASSSQRRTGFFTSTRAAAAAEDVQVQSKVTNKVYFDISIGNPTGKFVGRI 815
           S + F  F PA S+      F S+ A A  ++V +QSK+TNKVYFDISIGNP GK VGR+
Sbjct: 44  SSAVFGGFTPALSAAHSRARFVSS-ATADPKEVDLQSKITNKVYFDISIGNPVGKNVGRV 102

Query: 814 VIGLFADDVPQTAENFRALCTGEKGFGYQGSSFHRVIKDFMIQXXXXXXXXXXXXKSIYG 635
           VIGL+ DDVPQTAENFRALCTGEKGFGY+GSSFHRVIKDFMIQ            KSIYG
Sbjct: 103 VIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYG 162

Query: 634 RTFKDENFKLAHVGPGTLSMANAGPNTNGSQFFICTVKTPWLDERHVVFGQVLEGMDIVK 455
           RTFKDENFKL H GPG +SMANAGPNTNGSQFFICTVKTPWLD RHVVFGQV+EGMDIVK
Sbjct: 163 RTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVK 222

Query: 454 LIESQETDRGDRPKKKVVISECGELPTV 371
           +IESQETDRGDRPKKKVVISECGELP V
Sbjct: 223 MIESQETDRGDRPKKKVVISECGELPVV 250


>ref|XP_002439092.1| hypothetical protein SORBIDRAFT_09g000350 [Sorghum bicolor]
            gi|241944377|gb|EES17522.1| hypothetical protein
            SORBIDRAFT_09g000350 [Sorghum bicolor]
          Length = 249

 Score =  314 bits (805), Expect = 2e-83
 Identities = 161/211 (76%), Positives = 171/211 (81%)
 Frame = -1

Query: 1003 LSSSGSFFSRFVPASSSQRRTGFFTSTRAAAAAEDVQVQSKVTNKVYFDISIGNPTGKFV 824
            L S    FS  + AS+S  R  F TS  A+A  ++  +QSK+TNKVYFDISIGNP GK V
Sbjct: 41   LPSQAVSFSGGLAASTSHSRARFATS--ASAEPKEADLQSKITNKVYFDISIGNPVGKNV 98

Query: 823  GRIVIGLFADDVPQTAENFRALCTGEKGFGYQGSSFHRVIKDFMIQXXXXXXXXXXXXKS 644
            GRIVIGL+ DDVPQTAENFRALCTGEKGFGY+GSSFHRVI DFMIQ            KS
Sbjct: 99   GRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVISDFMIQGGDFDKGNGTGGKS 158

Query: 643  IYGRTFKDENFKLAHVGPGTLSMANAGPNTNGSQFFICTVKTPWLDERHVVFGQVLEGMD 464
            IYGRTFKDENFKL H GPG +SMANAGPNTNGSQFFICTVKTPWLD RHVVFGQVLEGMD
Sbjct: 159  IYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVLEGMD 218

Query: 463  IVKLIESQETDRGDRPKKKVVISECGELPTV 371
            IVKLIESQETDRGDRPKKKVVISECGELP V
Sbjct: 219  IVKLIESQETDRGDRPKKKVVISECGELPVV 249


>ref|XP_002514874.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
            gi|223545925|gb|EEF47428.1| peptidyl-prolyl cis-trans
            isomerase, putative [Ricinus communis]
          Length = 256

 Score =  312 bits (800), Expect = 9e-83
 Identities = 160/211 (75%), Positives = 174/211 (82%), Gaps = 2/211 (0%)
 Frame = -1

Query: 1003 LSSSGSFFSRFVPA--SSSQRRTGFFTSTRAAAAAEDVQVQSKVTNKVYFDISIGNPTGK 830
            LSSS SFFS    +  +SS+ +T F +S RA +   D+Q  SKVTNKVYFDISIGNP  K
Sbjct: 44   LSSSSSFFSGSFSSLTTSSKHKTRFISSIRATSEVADLQ--SKVTNKVYFDISIGNPVPK 101

Query: 829  FVGRIVIGLFADDVPQTAENFRALCTGEKGFGYQGSSFHRVIKDFMIQXXXXXXXXXXXX 650
              GRIVIGL+ DDVPQTAENFRALCTGEKGFGY+GS+FHRVIKDFMIQ            
Sbjct: 102  LAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGG 161

Query: 649  KSIYGRTFKDENFKLAHVGPGTLSMANAGPNTNGSQFFICTVKTPWLDERHVVFGQVLEG 470
            KSIYGRTFKDENFKLAH G G +SMANAGPNTNGSQFFICTVKTPWLD+RHVVFGQVLEG
Sbjct: 162  KSIYGRTFKDENFKLAHTGAGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEG 221

Query: 469  MDIVKLIESQETDRGDRPKKKVVISECGELP 377
            MDIVKLIESQETDRGDRP+K+VVISECGELP
Sbjct: 222  MDIVKLIESQETDRGDRPRKRVVISECGELP 252


>gb|AFW75093.1| putative peptidyl-prolyl cis-trans isomerase family protein [Zea
            mays]
          Length = 251

 Score =  310 bits (795), Expect = 4e-82
 Identities = 158/211 (74%), Positives = 170/211 (80%)
 Frame = -1

Query: 1003 LSSSGSFFSRFVPASSSQRRTGFFTSTRAAAAAEDVQVQSKVTNKVYFDISIGNPTGKFV 824
            + S    FS  + AS S  R  F TS  A+A  ++  +QSK+TNKVYFDISIGNP GK V
Sbjct: 43   IPSQAVSFSGGLAASPSHSRARFATS--ASAEPKEADLQSKITNKVYFDISIGNPVGKNV 100

Query: 823  GRIVIGLFADDVPQTAENFRALCTGEKGFGYQGSSFHRVIKDFMIQXXXXXXXXXXXXKS 644
            GRIVIGL+ DDVPQTAENFRALCTGEKGFGY+GSSFHRVI DFMIQ            KS
Sbjct: 101  GRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVISDFMIQGGDFDKGNGTGGKS 160

Query: 643  IYGRTFKDENFKLAHVGPGTLSMANAGPNTNGSQFFICTVKTPWLDERHVVFGQVLEGMD 464
            IYGRTFKDENFKL H GPG +SMANAGPNTNGSQFFICTVKTPWLD RHVVFGQV+EGMD
Sbjct: 161  IYGRTFKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVVEGMD 220

Query: 463  IVKLIESQETDRGDRPKKKVVISECGELPTV 371
            IV+LIESQETDRGDRPKKKVVISECGELP V
Sbjct: 221  IVRLIESQETDRGDRPKKKVVISECGELPVV 251


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