BLASTX nr result

ID: Coptis25_contig00006766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006766
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinif...   622   e-176
ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]     616   e-174
ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sat...   615   e-174
ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sat...   615   e-174
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]     615   e-174

>ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinifera]
            gi|296087785|emb|CBI35041.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  622 bits (1603), Expect = e-176
 Identities = 302/347 (87%), Positives = 333/347 (95%)
 Frame = -3

Query: 1232 DETPMISYVNAHDVLEGRRNCAKASPTHDSDASQGPRVIVVGPTDSGKSTLSRMLLSWAA 1053
            DETPMISYVN H VLEGRRN AKAS + D++ASQGPRVIVVGP DSGKSTLSRMLLSW+A
Sbjct: 81   DETPMISYVNVHAVLEGRRNRAKASSSGDAEASQGPRVIVVGPVDSGKSTLSRMLLSWSA 140

Query: 1052 KQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLVYFYGHTTPSVNADL 873
            KQGWKPTFVDLDIGQGSIT+PGC+AATPIEMPIDPV+GIPLEMPLVYFYGHTTPSVN +L
Sbjct: 141  KQGWKPTFVDLDIGQGSITIPGCIAATPIEMPIDPVDGIPLEMPLVYFYGHTTPSVNVEL 200

Query: 872  YKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHAINTFNADVVLVIGQ 693
            YKV+VKEL+RTLERQF+GN ESRAAGMVINTMGWIEGVGYEL+LHAI+TFNA+VVLV GQ
Sbjct: 201  YKVLVKELARTLERQFSGNAESRAAGMVINTMGWIEGVGYELILHAIDTFNANVVLVSGQ 260

Query: 692  EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIREYFYGLTNDLSPHSN 513
            EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSR AK RQKARSYRIREYFYGL+NDL+P+SN
Sbjct: 261  EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRGAKFRQKARSYRIREYFYGLSNDLAPYSN 320

Query: 512  IVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLLHLVLAVSFAKEPDQ 333
            + +F+DLFVYR+GGGPQAPRSALPIGAEPAADP+RLV VNINRD+LHLVLAVSFAKE DQ
Sbjct: 321  VSNFTDLFVYRIGGGPQAPRSALPIGAEPAADPLRLVRVNINRDMLHLVLAVSFAKEADQ 380

Query: 332  IISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 192
            I+SSN+AGFIY+TDIDIQR+KITYLAPSAGELPS+FL++GTLTWLE+
Sbjct: 381  IVSSNVAGFIYVTDIDIQREKITYLAPSAGELPSRFLIVGTLTWLES 427


>ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 432

 Score =  616 bits (1588), Expect = e-174
 Identities = 301/347 (86%), Positives = 328/347 (94%)
 Frame = -3

Query: 1232 DETPMISYVNAHDVLEGRRNCAKASPTHDSDASQGPRVIVVGPTDSGKSTLSRMLLSWAA 1053
            DETPM+SYVN H VL+GRR+ AKAS   DS +SQGPRVIVVGPTDSGKSTLSRMLLSWAA
Sbjct: 86   DETPMVSYVNVHAVLDGRRSRAKASSPDDSVSSQGPRVIVVGPTDSGKSTLSRMLLSWAA 145

Query: 1052 KQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLVYFYGHTTPSVNADL 873
            KQGWKPTFVDLDIGQGSIT+PGC+AATPIEMPIDPVEGIPLEMPLVYFYGH TPS N +L
Sbjct: 146  KQGWKPTFVDLDIGQGSITIPGCIAATPIEMPIDPVEGIPLEMPLVYFYGHATPSNNVEL 205

Query: 872  YKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHAINTFNADVVLVIGQ 693
            YKV+VKEL+  +ERQFTGN ESRA+GMVINTMGWIEGVGY+LLLHAI TF A+VVLV+GQ
Sbjct: 206  YKVLVKELAGMIERQFTGNAESRASGMVINTMGWIEGVGYDLLLHAIRTFKANVVLVLGQ 265

Query: 692  EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIREYFYGLTNDLSPHSN 513
            EKLCSMLKDVLK++P VDVVKLQ+SGGVVSRNAK RQKARSYRIREYFYGL+NDLSPHSN
Sbjct: 266  EKLCSMLKDVLKSEPKVDVVKLQRSGGVVSRNAKVRQKARSYRIREYFYGLSNDLSPHSN 325

Query: 512  IVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLLHLVLAVSFAKEPDQ 333
            I +FSDLFVYRVGGGPQAPRSALPIGAEPAADP R+VPVNINRDLLHLVLAVSFAKEPD+
Sbjct: 326  IANFSDLFVYRVGGGPQAPRSALPIGAEPAADPTRVVPVNINRDLLHLVLAVSFAKEPDE 385

Query: 332  IISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 192
            IISSN+AGFIY+TDIDIQRKKITYLAPSAGELPSK+L++G+LTWLET
Sbjct: 386  IISSNVAGFIYVTDIDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 432


>ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score =  615 bits (1587), Expect = e-174
 Identities = 300/347 (86%), Positives = 326/347 (93%)
 Frame = -3

Query: 1232 DETPMISYVNAHDVLEGRRNCAKASPTHDSDASQGPRVIVVGPTDSGKSTLSRMLLSWAA 1053
            DETPMI YVN H +LE RR+ A+AS + D  ++QGPRVIVVGPTDSGKSTLSRMLLSWAA
Sbjct: 92   DETPMIGYVNVHAILEARRSRARASSSDDPGSTQGPRVIVVGPTDSGKSTLSRMLLSWAA 151

Query: 1052 KQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLVYFYGHTTPSVNADL 873
            KQGWKPTFVDLDIGQGSIT+PGC+AATPIE+PIDPVEGIPLEMPLVYFYGHTTPS N DL
Sbjct: 152  KQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPLVYFYGHTTPSNNVDL 211

Query: 872  YKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHAINTFNADVVLVIGQ 693
            YKV+VKEL++ LERQFTGN ESRAAGMVINTMGWIEGVGYELLLHAI+T NA+VVLV+GQ
Sbjct: 212  YKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLHAIDTLNANVVLVLGQ 271

Query: 692  EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIREYFYGLTNDLSPHSN 513
            EKL SMLKDVLKNKPNVDVVKLQKSGGVVSRNAK RQKARSYRIREYFYG  NDLSPHSN
Sbjct: 272  EKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIREYFYGPANDLSPHSN 331

Query: 512  IVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLLHLVLAVSFAKEPDQ 333
            I +FSDLF+YR+GGGPQAPRSALPIGAEPAADP RLVPVNINRDLLHLVLAVSFAKEP++
Sbjct: 332  IANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDLLHLVLAVSFAKEPEE 391

Query: 332  IISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 192
            IISSN+AGF+YITDIDIQRKKITYLAPSAGELP K+L++GTLTW+ET
Sbjct: 392  IISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438


>ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score =  615 bits (1587), Expect = e-174
 Identities = 300/347 (86%), Positives = 326/347 (93%)
 Frame = -3

Query: 1232 DETPMISYVNAHDVLEGRRNCAKASPTHDSDASQGPRVIVVGPTDSGKSTLSRMLLSWAA 1053
            DETPMI YVN H +LE RR+ A+AS + D  ++QGPRVIVVGPTDSGKSTLSRMLLSWAA
Sbjct: 92   DETPMIGYVNVHAILEARRSRARASSSDDPGSTQGPRVIVVGPTDSGKSTLSRMLLSWAA 151

Query: 1052 KQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLVYFYGHTTPSVNADL 873
            KQGWKPTFVDLDIGQGSIT+PGC+AATPIE+PIDPVEGIPLEMPLVYFYGHTTPS N DL
Sbjct: 152  KQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPLVYFYGHTTPSNNVDL 211

Query: 872  YKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHAINTFNADVVLVIGQ 693
            YKV+VKEL++ LERQFTGN ESRAAGMVINTMGWIEGVGYELLLHAI+T NA+VVLV+GQ
Sbjct: 212  YKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLHAIDTLNANVVLVLGQ 271

Query: 692  EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIREYFYGLTNDLSPHSN 513
            EKL SMLKDVLKNKPNVDVVKLQKSGGVVSRNAK RQKARSYRIREYFYG  NDLSPHSN
Sbjct: 272  EKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIREYFYGPANDLSPHSN 331

Query: 512  IVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLLHLVLAVSFAKEPDQ 333
            I +FSDLF+YR+GGGPQAPRSALPIGAEPAADP RLVPVNINRDLLHLVLAVSFAKEP++
Sbjct: 332  IANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDLLHLVLAVSFAKEPEE 391

Query: 332  IISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 192
            IISSN+AGF+YITDIDIQRKKITYLAPSAGELP K+L++GTLTW+ET
Sbjct: 392  IISSNVAGFVYITDIDIQRKKITYLAPSAGELPGKYLIVGTLTWIET 438


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score =  615 bits (1586), Expect = e-174
 Identities = 299/347 (86%), Positives = 328/347 (94%)
 Frame = -3

Query: 1232 DETPMISYVNAHDVLEGRRNCAKASPTHDSDASQGPRVIVVGPTDSGKSTLSRMLLSWAA 1053
            DETPM+SYVN H VL+GRR+ AKAS   DS +SQGPRVIVVGPTDSGKSTLSRMLLSWAA
Sbjct: 92   DETPMVSYVNVHAVLDGRRSRAKASSPDDSGSSQGPRVIVVGPTDSGKSTLSRMLLSWAA 151

Query: 1052 KQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLVYFYGHTTPSVNADL 873
            KQGWKPTFVDLDIGQGSIT+PGC+AATPIEMPIDPVEGIPLEMPLVY+YGH TPS N +L
Sbjct: 152  KQGWKPTFVDLDIGQGSITIPGCIAATPIEMPIDPVEGIPLEMPLVYYYGHATPSNNVEL 211

Query: 872  YKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHAINTFNADVVLVIGQ 693
            YKV+VKEL+  +ERQFTGN ESRA+GMVINTMGWIEGVGY+LLLHAI TF A+VVLV+GQ
Sbjct: 212  YKVLVKELAGMIERQFTGNAESRASGMVINTMGWIEGVGYDLLLHAIRTFKANVVLVLGQ 271

Query: 692  EKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIREYFYGLTNDLSPHSN 513
            EKLCSMLKDVLK++P VDVVKLQ+SGGVVSRNAK RQKARSYRIREYFYGL+NDLSPHSN
Sbjct: 272  EKLCSMLKDVLKSEPKVDVVKLQRSGGVVSRNAKVRQKARSYRIREYFYGLSNDLSPHSN 331

Query: 512  IVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLLHLVLAVSFAKEPDQ 333
            I +FSDLFVYRVGGGPQAPRSALPIGAEPAADP R+VPVNINRDLLHLVLAVSFAKEPD+
Sbjct: 332  IANFSDLFVYRVGGGPQAPRSALPIGAEPAADPTRVVPVNINRDLLHLVLAVSFAKEPDE 391

Query: 332  IISSNIAGFIYITDIDIQRKKITYLAPSAGELPSKFLVIGTLTWLET 192
            IISSN+AGFIY+TD+DIQRKKITYLAPSAGELPSK+L++G+LTWLET
Sbjct: 392  IISSNVAGFIYVTDVDIQRKKITYLAPSAGELPSKYLIMGSLTWLET 438


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