BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006752
         (1242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884312.1| predicted protein [Arabidopsis lyrata subsp....   177   6e-42
ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like ...   176   8e-42
ref|XP_002525941.1| ubiquitin-protein ligase, putative [Ricinus ...   176   1e-41
ref|NP_186875.2| E3 ubiquitin-protein ligase UBR4 [Arabidopsis t...   174   3e-41
gb|AAF02112.1|AC009755_5 unknown protein [Arabidopsis thaliana] ...   174   3e-41

>ref|XP_002884312.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297330152|gb|EFH60571.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 5090

 Score =  177 bits (448), Expect = 6e-42
 Identities = 84/115 (73%), Positives = 93/115 (80%)
 Frame = +2

Query: 524  VAISSRLLQAPFPKQTMLATDDIAENVVSTPAPTDIANATGGITQVMIEKDSATSLRQYC 703
            +AISSRLLQ PFPKQTML TDD+ +NV +   PT  A   GG T VMIE+DS TS  QYC
Sbjct: 2553 LAISSRLLQVPFPKQTMLTTDDLVDNVTTPSVPTRTA---GGNTHVMIEEDSITSSVQYC 2609

Query: 704  CDGCSTCPILRLRWHCTECRDFDLCEACYKVLDADWLPPPHSRDHPMSAIPIEME 868
            CDGCST PILR RWHCT C DFDLCEACY+VLDAD LPPPH+RDHPM+AIPIE+E
Sbjct: 2610 CDGCSTVPILRRRWHCTVCPDFDLCEACYEVLDADRLPPPHTRDHPMTAIPIEVE 2664


>ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like [Glycine max]
          Length = 5112

 Score =  176 bits (447), Expect = 8e-42
 Identities = 85/122 (69%), Positives = 94/122 (77%)
 Frame = +2

Query: 521  SVAISSRLLQAPFPKQTMLATDDIAENVVSTPAPTDIANATGGITQVMIEKDSATSLRQY 700
            S+AISSRLLQ PFPKQTMLATDD  E+VVS P P D +    G  Q+MIE D+ TS  QY
Sbjct: 2557 SLAISSRLLQVPFPKQTMLATDDAVESVVSVPGPADPST---GNNQIMIEDDTITSSVQY 2613

Query: 701  CCDGCSTCPILRLRWHCTECRDFDLCEACYKVLDADWLPPPHSRDHPMSAIPIEMEMKES 880
            CCDGCST PI R RWHCT C DFDLCEACY+V DAD LPPPHSRDHPM+AIPIE++    
Sbjct: 2614 CCDGCSTVPIQRRRWHCTVCPDFDLCEACYEVPDADRLPPPHSRDHPMTAIPIEVDSVGD 2673

Query: 881  GN 886
            GN
Sbjct: 2674 GN 2675


>ref|XP_002525941.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223534770|gb|EEF36461.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 4466

 Score =  176 bits (445), Expect = 1e-41
 Identities = 84/115 (73%), Positives = 94/115 (81%)
 Frame = +2

Query: 524  VAISSRLLQAPFPKQTMLATDDIAENVVSTPAPTDIANATGGITQVMIEKDSATSLRQYC 703
            +AI+SRLLQ PFPKQTMLATDD A++ +S       A  TGG TQV+IE+DS TS  QYC
Sbjct: 1909 LAIASRLLQVPFPKQTMLATDDAADSGISAAGA---AETTGGNTQVLIEEDSITSSVQYC 1965

Query: 704  CDGCSTCPILRLRWHCTECRDFDLCEACYKVLDADWLPPPHSRDHPMSAIPIEME 868
            CDGCST PILR RWHCT C DFDLCEACY+VLDAD LPPPHSRDHPM+AIPIE+E
Sbjct: 1966 CDGCSTVPILRRRWHCTVCPDFDLCEACYQVLDADRLPPPHSRDHPMTAIPIEVE 2020


>ref|NP_186875.2| E3 ubiquitin-protein ligase UBR4 [Arabidopsis thaliana]
            gi|338817663|sp|Q9SRU2.2|BIG_ARATH RecName: Full=Auxin
            transport protein BIG; AltName: Full=Protein ATTENUATED
            SHADE AVOIDANCE 1; AltName: Full=Protein CORYMBOSA1;
            AltName: Full=Protein DARK OVER-EXPRESSION OF CAB 1;
            AltName: Full=Protein LOW PHOSPHATE-RESISTANT ROOT 1;
            AltName: Full=Protein TRANSPORT INHIBITOR RESPONSE 3;
            AltName: Full=Protein UMBRELLA 1
            gi|332640264|gb|AEE73785.1| E3 ubiquitin-protein ligase
            UBR4 [Arabidopsis thaliana]
          Length = 5098

 Score =  174 bits (442), Expect = 3e-41
 Identities = 83/115 (72%), Positives = 92/115 (80%)
 Frame = +2

Query: 524  VAISSRLLQAPFPKQTMLATDDIAENVVSTPAPTDIANATGGITQVMIEKDSATSLRQYC 703
            +AISSRLLQ PFPKQTML TDD+ +NV +   P   A   GG T VMIE+DS TS  QYC
Sbjct: 2561 LAISSRLLQVPFPKQTMLTTDDLVDNVTTPSVPIRTA---GGNTHVMIEEDSITSSVQYC 2617

Query: 704  CDGCSTCPILRLRWHCTECRDFDLCEACYKVLDADWLPPPHSRDHPMSAIPIEME 868
            CDGCST PILR RWHCT C DFDLCEACY+VLDAD LPPPH+RDHPM+AIPIE+E
Sbjct: 2618 CDGCSTVPILRRRWHCTVCPDFDLCEACYEVLDADRLPPPHTRDHPMTAIPIEVE 2672


>gb|AAF02112.1|AC009755_5 unknown protein [Arabidopsis thaliana]
            gi|21779966|gb|AAM77595.1|AF507018_1 auxin transport
            protein [Arabidopsis thaliana]
          Length = 5079

 Score =  174 bits (442), Expect = 3e-41
 Identities = 83/115 (72%), Positives = 92/115 (80%)
 Frame = +2

Query: 524  VAISSRLLQAPFPKQTMLATDDIAENVVSTPAPTDIANATGGITQVMIEKDSATSLRQYC 703
            +AISSRLLQ PFPKQTML TDD+ +NV +   P   A   GG T VMIE+DS TS  QYC
Sbjct: 2561 LAISSRLLQVPFPKQTMLTTDDLVDNVTTPSVPIRTA---GGNTHVMIEEDSITSSVQYC 2617

Query: 704  CDGCSTCPILRLRWHCTECRDFDLCEACYKVLDADWLPPPHSRDHPMSAIPIEME 868
            CDGCST PILR RWHCT C DFDLCEACY+VLDAD LPPPH+RDHPM+AIPIE+E
Sbjct: 2618 CDGCSTVPILRRRWHCTVCPDFDLCEACYEVLDADRLPPPHTRDHPMTAIPIEVE 2672