BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006750
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   183   3e-44
gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]      178   1e-42
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   177   1e-42
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu...   176   4e-42
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]...   176   5e-42

>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  183 bits (464), Expect = 3e-44
 Identities = 96/139 (69%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
 Frame = +3

Query: 102 MATSVMASLNLKPSPFPEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 278
           MA SVM+SL+LKPSPF  +  AVRG+PSLARS+SSF+V+ASG KKIKTD PYG GGGM L
Sbjct: 1   MAASVMSSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKL 60

Query: 279 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXXLLIWAVTX 458
            DGLDASGRK KGKGVYQF DKYGANVDGYSPIYSPDEW+            LLIWAVT 
Sbjct: 61  SDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTL 120

Query: 459 XXXXXXXXXXVYNTSALAQ 515
                     VYNTSALAQ
Sbjct: 121 AGLLLGGALLVYNTSALAQ 139


>gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 136

 Score =  178 bits (451), Expect = 1e-42
 Identities = 90/138 (65%), Positives = 104/138 (75%)
 Frame = +3

Query: 102 MATSVMASLNLKPSPFPEKSAAVRGVPSLARSTSSFKVQASGKKIKTDSPYGPGGGMNLR 281
           MA SVMASL+LKPSPF  + ++VRG+P+L+R T  FK++ASG KIKTD+PYG GGGMNLR
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKIKTDTPYGTGGGMNLR 58

Query: 282 DGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXXLLIWAVTXX 461
           DGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ DEW+            LLIWAVT  
Sbjct: 59  DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLA 118

Query: 462 XXXXXXXXXVYNTSALAQ 515
                    VY+TSALAQ
Sbjct: 119 GILAGGALLVYSTSALAQ 136


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  177 bits (450), Expect = 1e-42
 Identities = 93/139 (66%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
 Frame = +3

Query: 102 MATSVMASLNLKPSPFPEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 278
           MATSVM+SL+LK SPF EKSAA RG+PSLAR +SSF+V+ASG KKIKTD PYG GGGM+L
Sbjct: 1   MATSVMSSLSLKASPFLEKSAA-RGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSL 59

Query: 279 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXXLLIWAVTX 458
           RDGLDASGRKPKGKGVYQF DKYGANVDGYSPIY   +W+            LL+WA+T 
Sbjct: 60  RDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITL 119

Query: 459 XXXXXXXXXXVYNTSALAQ 515
                     VYNTSAL+Q
Sbjct: 120 AALLLGGALLVYNTSALSQ 138


>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
           gi|118487848|gb|ABK95747.1| unknown [Populus
           trichocarpa] gi|222875313|gb|EEF12444.1| hypothetical
           protein POPTRDRAFT_674736 [Populus trichocarpa]
          Length = 137

 Score =  176 bits (446), Expect = 4e-42
 Identities = 91/139 (65%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
 Frame = +3

Query: 102 MATSVMASLNLKPSPFPEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 278
           MA SVMASL+LKPSPF  + ++VRG+P+L+R T  FK++ASG KKIKTD+PYG GGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 279 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXXLLIWAVTX 458
           RDGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ DEW+            LLIWAVT 
Sbjct: 59  RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTL 118

Query: 459 XXXXXXXXXXVYNTSALAQ 515
                     VY+TSALAQ
Sbjct: 119 AGILAGGALLVYSTSALAQ 137


>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score =  176 bits (445), Expect = 5e-42
 Identities = 91/139 (65%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
 Frame = +3

Query: 102 MATSVMASLNLKPSPFPEKSAAVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 278
           MA SVMASL+LKPSPF  + ++VRG+P+L+R   SFK++ASG KKIKTD+PYG GGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRR--SFKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 279 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPDEWAXXXXXXXXXXXXLLIWAVTX 458
           RDGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ DEW+            LLIWAVT 
Sbjct: 59  RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTL 118

Query: 459 XXXXXXXXXXVYNTSALAQ 515
                     VY+TSALAQ
Sbjct: 119 AGILAGGALLVYSTSALAQ 137