BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006747
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ...   106   3e-21
ref|XP_002527430.1| conserved hypothetical protein [Ricinus comm...   101   7e-20
ref|XP_002301844.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003538189.1| PREDICTED: recQ-mediated genome instability ...    97   1e-18
ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1...    97   1e-18

>ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis
           vinifera] gi|297734866|emb|CBI17100.3| unnamed protein
           product [Vitis vinifera]
          Length = 134

 Score =  106 bits (264), Expect = 3e-21
 Identities = 53/87 (60%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = +2

Query: 44  MDYNLAALKLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTE-QGHFI 220
           MDY+LAALK++ GQL+ A+++ SQ+     A TL G+LFQRAWLQG+LVS S + QG F+
Sbjct: 1   MDYSLAALKVMCGQLRKAKETTSQN-----AFTLGGVLFQRAWLQGVLVSVSDDAQGRFV 55

Query: 221 LDDGSGIIELSLSNEFRQRNWKLGMYV 301
           LDDG+G+I LSLS +F  RNWK+GMYV
Sbjct: 56  LDDGTGVIHLSLSGDFLHRNWKIGMYV 82



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 29/35 (82%), Positives = 35/35 (100%)
 Frame = +1

Query: 430 EPPVIKVHKMVDLSPFPDREAMWHLEVIEAYKLFY 534
           EPP+IKVHK+VDLSPFPDRE+MW+LEVIEA++LFY
Sbjct: 94  EPPMIKVHKIVDLSPFPDRESMWYLEVIEAFRLFY 128


>ref|XP_002527430.1| conserved hypothetical protein [Ricinus communis]
           gi|223533165|gb|EEF34922.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score =  101 bits (252), Expect = 7e-20
 Identities = 56/86 (65%), Positives = 66/86 (76%)
 Frame = +2

Query: 44  MDYNLAALKLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHFIL 223
           MDY+LAALKLL  QLK+AR++ SQ+     ALTL GILFQRAWLQGILV    + G+ IL
Sbjct: 1   MDYSLAALKLLCVQLKDARETSSQN-----ALTLGGILFQRAWLQGILVFNDGD-GNLIL 54

Query: 224 DDGSGIIELSLSNEFRQRNWKLGMYV 301
           DDG+G+I LSLS +FR R W LGMYV
Sbjct: 55  DDGTGVIHLSLSGDFRLRRWDLGMYV 80


>ref|XP_002301844.1| predicted protein [Populus trichocarpa] gi|222843570|gb|EEE81117.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/88 (61%), Positives = 67/88 (76%)
 Frame = +2

Query: 38  EKMDYNLAALKLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHF 217
           ++MDY+LAALKLL  QLK+  ++ SQ+     ALTL GILFQRAWLQGILVS   + G  
Sbjct: 18  QEMDYSLAALKLLRVQLKDTSETPSQN-----ALTLGGILFQRAWLQGILVSNDGD-GRL 71

Query: 218 ILDDGSGIIELSLSNEFRQRNWKLGMYV 301
           +LDDG+G+IEL LS +FR R+W LGMYV
Sbjct: 72  LLDDGTGVIELCLSGDFRLRHWDLGMYV 99


>ref|XP_003538189.1| PREDICTED: recQ-mediated genome instability protein 2-like [Glycine
           max]
          Length = 142

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/90 (58%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
 Frame = +2

Query: 44  MDYNLAALKLLSGQLKNARQ----SQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQG 211
           MDY+LAALKL   QLK AR+     Q+Q S + S+ TL G+LFQR WLQG+LVS S + G
Sbjct: 1   MDYDLAALKLFCSQLKQAREVAMPCQTQ-SQSQSSFTLGGLLFQRPWLQGVLVSAS-DAG 58

Query: 212 HFILDDGSGIIELSLSNEFRQRNWKLGMYV 301
             +LDDG+ ++ELSL++EFR R WKLGMYV
Sbjct: 59  SLLLDDGTDLVELSLNSEFRHRPWKLGMYV 88



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = +1

Query: 436 PVIKVHKMVDLSPFPDREAMWHLEVIEAYKLFY 534
           P+IKVHK+VDLS  P+REAMW+LEV+EAYKLFY
Sbjct: 102 PMIKVHKIVDLSSSPNREAMWYLEVMEAYKLFY 134


>ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1|
           unknown [Populus trichocarpa]
           gi|222837597|gb|EEE75962.1| predicted protein [Populus
           trichocarpa]
          Length = 134

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 54/86 (62%), Positives = 65/86 (75%)
 Frame = +2

Query: 44  MDYNLAALKLLSGQLKNARQSQSQDSSTPSALTLFGILFQRAWLQGILVSGSTEQGHFIL 223
           MDY+LAALKLL  QLK+A ++ SQ+     ALTL GILFQRAWLQGILVS   + G  +L
Sbjct: 1   MDYSLAALKLLCVQLKDASETPSQN-----ALTLGGILFQRAWLQGILVSNDGD-GRLLL 54

Query: 224 DDGSGIIELSLSNEFRQRNWKLGMYV 301
           DDG+G+IEL LS +FR R+W  GMYV
Sbjct: 55  DDGTGVIELCLSPDFRLRHWDSGMYV 80



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/35 (85%), Positives = 33/35 (94%)
 Frame = +1

Query: 430 EPPVIKVHKMVDLSPFPDREAMWHLEVIEAYKLFY 534
           E P+IKVHKMVDLS FPDREAMW+LEV+EAYKLFY
Sbjct: 92  ETPMIKVHKMVDLSAFPDREAMWYLEVMEAYKLFY 126