BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006742
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513003.1| ubiquitin fusion degradaton protein, putativ...   322   e-116
ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...   324   e-115
emb|CBI37983.3| unnamed protein product [Vitis vinifera]              324   e-115
gb|ABK95938.1| unknown [Populus trichocarpa]                          322   e-114
ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   322   e-114

>ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
           gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton
           protein, putative [Ricinus communis]
          Length = 356

 Score =  322 bits (825), Expect(2) = e-116
 Identities = 155/174 (89%), Positives = 160/174 (91%)
 Frame = +3

Query: 3   PPSALDRLASLHIDYPMLFELHNTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 182
           PPSALDRLASLHIDYPMLFEL N A ER+SHCGVLEFIAEEGMIYMPYWMMEN+LLQEGD
Sbjct: 74  PPSALDRLASLHIDYPMLFELRNDAAERISHCGVLEFIAEEGMIYMPYWMMENLLLQEGD 133

Query: 183 TVRVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 362
            VRVKN TLPKG YVKLQPHTKDFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYY
Sbjct: 134 IVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYY 193

Query: 363 IDIVETKPANAISIIETDCEVDFAPPLDYKEPERAVPPVPSGKAPAQVEEAPVE 524
           IDIVETKP+NAISIIETDCEVDFAPPLDYKEPER  P +P  KA AQVEE P E
Sbjct: 194 IDIVETKPSNAISIIETDCEVDFAPPLDYKEPERTTPSIPQKKATAQVEEVPEE 247



 Score =  123 bits (309), Expect(2) = e-116
 Identities = 67/107 (62%), Positives = 71/107 (66%)
 Frame = +1

Query: 610 KFNPFTGVGRRLDGKPLKHQSSPVSSSEPKDKRPEVAXXXXXXXXXXXXXXXXXRQHQGK 789
           KFNPFTGV RRLDGKPLK Q  PVSS   KDK+  V                  RQ QGK
Sbjct: 251 KFNPFTGVARRLDGKPLKQQPFPVSSQGSKDKQAAVPSGRGQPSLESSSQNSA-RQSQGK 309

Query: 790 LVFGSSANRAPKESQKSVEKETKKEQPLKTEEPKFQAFTGKKYSLKG 930
           LVFGS+ NRAPKE+QK V KETK EQ  K EEPKFQ FTG+KYSLKG
Sbjct: 310 LVFGSNVNRAPKETQKEVAKETKPEQSQKNEEPKFQPFTGRKYSLKG 356


>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
           vinifera]
          Length = 319

 Score =  324 bits (831), Expect(2) = e-115
 Identities = 157/174 (90%), Positives = 164/174 (94%)
 Frame = +3

Query: 3   PPSALDRLASLHIDYPMLFELHNTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 182
           PPSALDRLASLHIDYPMLFEL N A +RVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD
Sbjct: 39  PPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 98

Query: 183 TVRVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 362
           TV+VKN TLPKG YVKLQPHT DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY
Sbjct: 99  TVQVKNVTLPKGTYVKLQPHTTDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 158

Query: 363 IDIVETKPANAISIIETDCEVDFAPPLDYKEPERAVPPVPSGKAPAQVEEAPVE 524
           IDIVETKP+NAISIIETDCEVDFAPPLD+KEPE+ V PVP GKA A+V+EAPVE
Sbjct: 159 IDIVETKPSNAISIIETDCEVDFAPPLDFKEPEKPVAPVPLGKAAAEVQEAPVE 212



 Score =  117 bits (293), Expect(2) = e-115
 Identities = 63/107 (58%), Positives = 72/107 (67%)
 Frame = +1

Query: 610 KFNPFTGVGRRLDGKPLKHQSSPVSSSEPKDKRPEVAXXXXXXXXXXXXXXXXXRQHQGK 789
           KFNPF GVGRRLDGKP K++  PVSSS  KDK+P                    RQ QGK
Sbjct: 216 KFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQP--VNRGSGQPSAGSSSQSSSRQSQGK 273

Query: 790 LVFGSSANRAPKESQKSVEKETKKEQPLKTEEPKFQAFTGKKYSLKG 930
           LVFGS+ NR+PKE+QK   K TK+E+P K EEPKFQ F+GKKYSLKG
Sbjct: 274 LVFGSNVNRSPKETQKEAAKATKQEEP-KKEEPKFQPFSGKKYSLKG 319


>emb|CBI37983.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  324 bits (831), Expect(2) = e-115
 Identities = 157/174 (90%), Positives = 164/174 (94%)
 Frame = +3

Query: 3   PPSALDRLASLHIDYPMLFELHNTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 182
           PPSALDRLASLHIDYPMLFEL N A +RVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD
Sbjct: 29  PPSALDRLASLHIDYPMLFELSNPAAQRVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 88

Query: 183 TVRVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 362
           TV+VKN TLPKG YVKLQPHT DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY
Sbjct: 89  TVQVKNVTLPKGTYVKLQPHTTDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 148

Query: 363 IDIVETKPANAISIIETDCEVDFAPPLDYKEPERAVPPVPSGKAPAQVEEAPVE 524
           IDIVETKP+NAISIIETDCEVDFAPPLD+KEPE+ V PVP GKA A+V+EAPVE
Sbjct: 149 IDIVETKPSNAISIIETDCEVDFAPPLDFKEPEKPVAPVPLGKAAAEVQEAPVE 202



 Score =  117 bits (293), Expect(2) = e-115
 Identities = 63/107 (58%), Positives = 72/107 (67%)
 Frame = +1

Query: 610 KFNPFTGVGRRLDGKPLKHQSSPVSSSEPKDKRPEVAXXXXXXXXXXXXXXXXXRQHQGK 789
           KFNPF GVGRRLDGKP K++  PVSSS  KDK+P                    RQ QGK
Sbjct: 206 KFNPFCGVGRRLDGKPQKYEPPPVSSSGSKDKQP--VNRGSGQPSAGSSSQSSSRQSQGK 263

Query: 790 LVFGSSANRAPKESQKSVEKETKKEQPLKTEEPKFQAFTGKKYSLKG 930
           LVFGS+ NR+PKE+QK   K TK+E+P K EEPKFQ F+GKKYSLKG
Sbjct: 264 LVFGSNVNRSPKETQKEAAKATKQEEP-KKEEPKFQPFSGKKYSLKG 309


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  322 bits (826), Expect(2) = e-114
 Identities = 155/174 (89%), Positives = 161/174 (92%)
 Frame = +3

Query: 3   PPSALDRLASLHIDYPMLFELHNTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 182
           PPSALDRLASLHIDYPMLFEL N A ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEGD
Sbjct: 40  PPSALDRLASLHIDYPMLFELQNDAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGD 99

Query: 183 TVRVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 362
           TVRVKN TLPKGKYVKLQPHTKDFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYY
Sbjct: 100 TVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYY 159

Query: 363 IDIVETKPANAISIIETDCEVDFAPPLDYKEPERAVPPVPSGKAPAQVEEAPVE 524
           IDI+ETKP+NAISIIETDCEVDFAPPLDYKEPE+ V  VP  KA +Q EE P E
Sbjct: 160 IDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPVASVPPSKATSQAEEVPAE 213



 Score =  117 bits (293), Expect(2) = e-114
 Identities = 66/109 (60%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
 Frame = +1

Query: 610 KFNPFTGVGRRLDGKPLKHQSSP-VSSSEPKDKRPEVAXXXXXXXXXXXXXXXXXRQHQG 786
           KFNPFTG GRRLDGKPL +Q  P +SSS  KDK+P VA                 R+ QG
Sbjct: 217 KFNPFTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSSQNTA-RKSQG 275

Query: 787 KLVFGSSANRAPKESQKSVE-KETKKEQPLKTEEPKFQAFTGKKYSLKG 930
           KLVFGS+  R PKE+Q+    KETK+EQP K EEPKFQAFTGKKYSLKG
Sbjct: 276 KLVFGSNTGRTPKETQREESGKETKQEQPEKKEEPKFQAFTGKKYSLKG 324


>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  322 bits (826), Expect(2) = e-114
 Identities = 155/174 (89%), Positives = 161/174 (92%)
 Frame = +3

Query: 3   PPSALDRLASLHIDYPMLFELHNTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD 182
           PPSALDRLASLHIDYPMLFEL N A ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEGD
Sbjct: 39  PPSALDRLASLHIDYPMLFELQNDAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGD 98

Query: 183 TVRVKNATLPKGKYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYY 362
           TVRVKN TLPKGKYVKLQPHTKDFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYY
Sbjct: 99  TVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYY 158

Query: 363 IDIVETKPANAISIIETDCEVDFAPPLDYKEPERAVPPVPSGKAPAQVEEAPVE 524
           IDI+ETKP+NAISIIETDCEVDFAPPLDYKEPE+ V  VP  KA +Q EE P E
Sbjct: 159 IDIIETKPSNAISIIETDCEVDFAPPLDYKEPEKPVASVPPSKATSQAEEVPAE 212



 Score =  117 bits (293), Expect(2) = e-114
 Identities = 66/109 (60%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
 Frame = +1

Query: 610 KFNPFTGVGRRLDGKPLKHQSSP-VSSSEPKDKRPEVAXXXXXXXXXXXXXXXXXRQHQG 786
           KFNPFTG GRRLDGKPL +Q  P +SSS  KDK+P VA                 R+ QG
Sbjct: 216 KFNPFTGAGRRLDGKPLSYQPPPALSSSVSKDKQPAVADGSRQPSLGSSSQNTA-RKSQG 274

Query: 787 KLVFGSSANRAPKESQKSVE-KETKKEQPLKTEEPKFQAFTGKKYSLKG 930
           KLVFGS+  R PKE+Q+    KETK+EQP K EEPKFQAFTGKKYSLKG
Sbjct: 275 KLVFGSNTGRTPKETQREESGKETKQEQPEKKEEPKFQAFTGKKYSLKG 323