BLASTX nr result

ID: Coptis25_contig00006739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006739
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15772.3| unnamed protein product [Vitis vinifera]               93   8e-19
ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223...    90   8e-19
ref|XP_002284717.1| PREDICTED: uncharacterized protein LOC100254...    93   8e-19
ref|XP_002511069.1| conserved hypothetical protein [Ricinus comm...    85   7e-17
ref|XP_002321767.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-15

>emb|CBI15772.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 93.2 bits (230), Expect(2) = 8e-19
 Identities = 50/106 (47%), Positives = 65/106 (61%)
 Frame = -3

Query: 595 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVKGDYVPVYITLGMIALSVSLGISTAM 416
           S  TFATST    +  A T D       ++ RGVKGD+VPVY+ +GMIA+SV+LG+ TAM
Sbjct: 92  SHYTFATSTSPKMRAYAPTADFS-NVQHSELRGVKGDFVPVYVAMGMIAMSVTLGLCTAM 150

Query: 415 HHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINASFFRKVSH 278
           H L YSPAV + K +R         + V DE +KF+  S  RKV+H
Sbjct: 151 HELMYSPAVHLRKSRRETLPEVEDPDTVVDEGDKFVKKSLLRKVAH 196



 Score = 26.9 bits (58), Expect(2) = 8e-19
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 188 DIQTRPLKMETLKSVGVDP 132
           D  TRP +  TLKSVG+DP
Sbjct: 209 DPLTRPPRAVTLKSVGIDP 227


>ref|XP_004157186.1| PREDICTED: uncharacterized protein LOC101223310 [Cucumis sativus]
          Length = 168

 Score = 90.1 bits (222), Expect(2) = 8e-19
 Identities = 50/107 (46%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = -3

Query: 595 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVK-GDYVPVYITLGMIALSVSLGISTA 419
           S RT+AT+T    K  A T D      ++KP+  + GD+VPVY+ +GMIALSV LG+  A
Sbjct: 21  STRTYATATTPRMKSYAPTADFSHFHHQSKPKASRAGDFVPVYVAIGMIALSVGLGLHMA 80

Query: 418 MHHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINASFFRKVSH 278
              L +SP+V V KK+R         E+VA+E EKF   SFFRKV+H
Sbjct: 81  KQQLAHSPSVSVRKKRRETIPEVVEPEHVAEETEKFFAKSFFRKVAH 127



 Score = 30.0 bits (66), Expect(2) = 8e-19
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -2

Query: 191 GDIQTRPLKMETLKSVGVDPAK 126
           GD    P + E+LKSVG+DPA+
Sbjct: 146 GDAYAHPHRTESLKSVGIDPAR 167


>ref|XP_002284717.1| PREDICTED: uncharacterized protein LOC100254405 [Vitis vinifera]
          Length = 158

 Score = 93.2 bits (230), Expect(2) = 8e-19
 Identities = 50/106 (47%), Positives = 65/106 (61%)
 Frame = -3

Query: 595 SRRTFATSTILNSKQVAATVDAQVEGPKAKPRGVKGDYVPVYITLGMIALSVSLGISTAM 416
           S  TFATST    +  A T D       ++ RGVKGD+VPVY+ +GMIA+SV+LG+ TAM
Sbjct: 20  SHYTFATSTSPKMRAYAPTADFS-NVQHSELRGVKGDFVPVYVAMGMIAMSVTLGLCTAM 78

Query: 415 HHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINASFFRKVSH 278
           H L YSPAV + K +R         + V DE +KF+  S  RKV+H
Sbjct: 79  HELMYSPAVHLRKSRRETLPEVEDPDTVVDEGDKFVKKSLLRKVAH 124



 Score = 26.9 bits (58), Expect(2) = 8e-19
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 188 DIQTRPLKMETLKSVGVDP 132
           D  TRP +  TLKSVG+DP
Sbjct: 137 DPLTRPPRAVTLKSVGIDP 155


>ref|XP_002511069.1| conserved hypothetical protein [Ricinus communis]
           gi|223550184|gb|EEF51671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 85.1 bits (209), Expect(2) = 7e-17
 Identities = 55/128 (42%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
 Frame = -3

Query: 634 MAFRKMDLMRTLLSR----RTFATSTILNSKQVAATVD-----AQVEGPKAKPRGVKGDY 482
           MAFR     + +++R     T+ TST    K  A   D      + E  K+K  G KGDY
Sbjct: 1   MAFRSTGYWKQMVNRLRGNATYGTSTSPKMKAYAPAADDFGNVLREERSKSK-MGQKGDY 59

Query: 481 VPVYITLGMIALSVSLGISTAMHHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINA 302
           VPVY+ LG+IALS  LG+ TA   L YSP+V+V KK R         E V DEA KF+  
Sbjct: 60  VPVYVALGLIALSTMLGLHTAKQQLLYSPSVRVKKKLRETIPEVVCPEKVVDEAHKFVAK 119

Query: 301 SFFRKVSH 278
           SF RK +H
Sbjct: 120 SFLRKAAH 127



 Score = 28.5 bits (62), Expect(2) = 7e-17
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 188 DIQTRPLKMETLKSVGVDP 132
           DI   P + ETLKS+G+DP
Sbjct: 140 DIYANPPRAETLKSIGIDP 158


>ref|XP_002321767.1| predicted protein [Populus trichocarpa] gi|222868763|gb|EEF05894.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 86.3 bits (212), Expect(2) = 1e-15
 Identities = 54/126 (42%), Positives = 72/126 (57%), Gaps = 7/126 (5%)
 Frame = -3

Query: 634 MAFRKMDLMRTLLSR----RTFATSTILNSKQVAATVDA---QVEGPKAKPRGVKGDYVP 476
           MA R M   +++ SR     T+ATST    K  A TVD    Q        + V+GD+VP
Sbjct: 1   MAVRSMGYWKSMASRLRGTATYATSTPPKLKY-AETVDQFGHQYHQESKHSKKVRGDFVP 59

Query: 475 VYITLGMIALSVSLGISTAMHHLKYSPAVQVSKKKRXXXXXXXXXEYVADEAEKFINASF 296
           VY+ +GMI +S+SLG+ TA   + Y+P V+V KK R         + V DEA+KFI  SF
Sbjct: 60  VYVAIGMITVSISLGLYTAKQQVLYAPNVRVRKKTRETVPELVDPDKVVDEADKFIKKSF 119

Query: 295 FRKVSH 278
           FRKV+H
Sbjct: 120 FRKVAH 125



 Score = 23.5 bits (49), Expect(2) = 1e-15
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 188 DIQTRPLKMETLKSVGVDP 132
           D+  +  + ETLK VG+DP
Sbjct: 144 DVFAQKPRAETLKDVGIDP 162


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