BLASTX nr result

ID: Coptis25_contig00006738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006738
         (2234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278391.1| PREDICTED: probable pyridoxal biosynthesis p...   478   e-132
sp|Q39963.1|PDX1_HEVBR RecName: Full=Probable pyridoxal biosynth...   472   e-130
ref|NP_195761.1| Pyridoxal biosynthesis protein PDX1.3 [Arabidop...   471   e-130
gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]      470   e-130
ref|XP_002308219.1| predicted protein [Populus trichocarpa] gi|2...   469   e-129

>ref|XP_002278391.1| PREDICTED: probable pyridoxal biosynthesis protein PDX1-like [Vitis
            vinifera]
          Length = 309

 Score =  478 bits (1229), Expect = e-132
 Identities = 250/303 (82%), Positives = 260/303 (85%)
 Frame = -3

Query: 2202 MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNXXXXXXXXXXXXXAVMA 2023
            M+GSGVVTVYGNGAITE K S FSVKVGLAQMLRGGVIMDVVN             AVMA
Sbjct: 1    MAGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 2022 LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 1843
            LERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILE+IGIDY+DES
Sbjct: 61   LERVPADIRAQGGVARMSDPSLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 1842 EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 1663
            EVLT+ADEDNHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV
Sbjct: 121  EVLTVADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 180

Query: 1662 RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXALM 1483
            RSVMG IRVLRNMDDDEVFT+AKK++APYDLVMQTKQLGRLPVV F           ALM
Sbjct: 181  RSVMGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALM 240

Query: 1482 MQLGCDXXXXXXXXXXXGDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1303
            MQLGCD           GDPA RARAIVQAVTHYSDPD+LAEVSCGLGEAMVG+NLND K
Sbjct: 241  MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDK 300

Query: 1302 VER 1294
            VER
Sbjct: 301  VER 303


>sp|Q39963.1|PDX1_HEVBR RecName: Full=Probable pyridoxal biosynthesis protein PDX1; AltName:
            Full=Ethylene-inducible protein HEVER
            gi|1209317|gb|AAA91063.1| ethylene-inducible protein
            [Hevea brasiliensis]
          Length = 309

 Score =  472 bits (1214), Expect = e-130
 Identities = 247/303 (81%), Positives = 260/303 (85%)
 Frame = -3

Query: 2202 MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNXXXXXXXXXXXXXAVMA 2023
            M+G+GVV VYGNGAITE K S FSVKVGLAQMLRGGVIMDVVN             AVMA
Sbjct: 1    MAGTGVVAVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMA 60

Query: 2022 LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 1843
            LERVPADIRAQGGVARMSDP LIKEIKQ+VTIPVMAKARIGHFVEAQILE+IGIDY+DES
Sbjct: 61   LERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 1842 EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 1663
            EVLT ADE+NHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRHV
Sbjct: 121  EVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHV 180

Query: 1662 RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXALM 1483
            RSVMG IR+LRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQF           ALM
Sbjct: 181  RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 1482 MQLGCDXXXXXXXXXXXGDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1303
            MQLGCD           GDPA RARAIVQAVTHYSDPD+LAEVSCGLGEAMVG+NLND+K
Sbjct: 241  MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGINLNDKK 300

Query: 1302 VER 1294
            VER
Sbjct: 301  VER 303


>ref|NP_195761.1| Pyridoxal biosynthesis protein PDX1.3 [Arabidopsis thaliana]
            gi|297806077|ref|XP_002870922.1| hypothetical protein
            ARALYDRAFT_908014 [Arabidopsis lyrata subsp. lyrata]
            gi|45477193|sp|Q8L940.2|PDX13_ARATH RecName:
            Full=Pyridoxal biosynthesis protein PDX1.3;
            Short=AtPDX1.3; Short=AtPDX1;1
            gi|16226309|gb|AAL16130.1|AF428298_1 AT5g01410/T10O8_120
            [Arabidopsis thaliana]
            gi|17933287|gb|AAL48227.1|AF446352_1 AT5g01410/T10O8_120
            [Arabidopsis thaliana] gi|7320719|emb|CAB81924.1|
            pyridoxine biosynthesis protein-like [Arabidopsis
            thaliana] gi|20453411|gb|AAM19944.1| AT5g01410/T10O8_120
            [Arabidopsis thaliana] gi|65329268|gb|AAY42123.1|
            pyridoxine biosynthesis protein [Arabidopsis thaliana]
            gi|110742648|dbj|BAE99236.1| pyridoxine biosynthesis
            protein - like [Arabidopsis thaliana]
            gi|297316759|gb|EFH47181.1| hypothetical protein
            ARALYDRAFT_908014 [Arabidopsis lyrata subsp. lyrata]
            gi|332002957|gb|AED90340.1| Pyridoxal biosynthesis
            protein PDX1.3 [Arabidopsis thaliana]
            gi|333108791|gb|AEF15886.1| pyridoxine biosynthesis
            protein [Arabidopsis thaliana]
          Length = 309

 Score =  471 bits (1213), Expect = e-130
 Identities = 248/303 (81%), Positives = 259/303 (85%)
 Frame = -3

Query: 2202 MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNXXXXXXXXXXXXXAVMA 2023
            M G+GVV VYGNGAITEAK S FSVKVGLAQMLRGGVIMDVVN             AVMA
Sbjct: 1    MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 2022 LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 1843
            LERVPADIRAQGGVARMSDP +IKEIKQAVTIPVMAKARIGHFVEAQILE+IGIDYIDES
Sbjct: 61   LERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES 120

Query: 1842 EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 1663
            EVLTLADED+HINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNI+EAVRHV
Sbjct: 121  EVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 1662 RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXALM 1483
            RSV G IRVLRNMDDDEVFTFAKK+AAPYDLVMQTKQLGRLPVVQF           ALM
Sbjct: 181  RSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 1482 MQLGCDXXXXXXXXXXXGDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1303
            MQLGCD           GDPA RARAIVQAVTHYSDP++L EVSCGLGEAMVG+NLND+K
Sbjct: 241  MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDEK 300

Query: 1302 VER 1294
            VER
Sbjct: 301  VER 303


>gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]
          Length = 310

 Score =  470 bits (1210), Expect = e-130
 Identities = 250/304 (82%), Positives = 257/304 (84%), Gaps = 1/304 (0%)
 Frame = -3

Query: 2202 MSGSGVVTVYGNGA-ITEAKNSTFSVKVGLAQMLRGGVIMDVVNXXXXXXXXXXXXXAVM 2026
            M GSGVVTVYGNGA ITE K S FSVKVGLAQMLRGGVIMDVVN             AVM
Sbjct: 1    MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60

Query: 2025 ALERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDE 1846
            ALERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILE+IG+DY+DE
Sbjct: 61   ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120

Query: 1845 SEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 1666
            SEVLTLADEDNHINKHNFR+PFVCGCRNLGEALRR+REGAAMIRTKGEAGTGNIVEAVRH
Sbjct: 121  SEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIVEAVRH 180

Query: 1665 VRSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXAL 1486
            VRSVMG IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVV F           AL
Sbjct: 181  VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 1485 MMQLGCDXXXXXXXXXXXGDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQ 1306
            MMQLGCD           GDPA RARAIVQAVTHYSDP +LAE+SCGLGEAMVGLNLND 
Sbjct: 241  MMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLNDS 300

Query: 1305 KVER 1294
             VER
Sbjct: 301  NVER 304


>ref|XP_002308219.1| predicted protein [Populus trichocarpa] gi|222854195|gb|EEE91742.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  469 bits (1208), Expect = e-129
 Identities = 245/303 (80%), Positives = 257/303 (84%)
 Frame = -3

Query: 2202 MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNXXXXXXXXXXXXXAVMA 2023
            M+G+GVV VYGNG ITE K S FSVKVGLAQMLRGGVIMDVV              AVMA
Sbjct: 1    MAGTGVVAVYGNGTITETKKSPFSVKVGLAQMLRGGVIMDVVTAEQARIAEEAGACAVMA 60

Query: 2022 LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 1843
            LERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILE+IG+DY+DES
Sbjct: 61   LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES 120

Query: 1842 EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 1663
            EVLTLADEDNHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRHV
Sbjct: 121  EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHV 180

Query: 1662 RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXALM 1483
            RSVMG IR+LRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQF           ALM
Sbjct: 181  RSVMGDIRMLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 1482 MQLGCDXXXXXXXXXXXGDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1303
            MQLGCD           GDP  R RAIVQAVTHYSDP++LAEVSCGLGEAMVGLNLND+K
Sbjct: 241  MQLGCDGVFVGSGVFKSGDPVKRGRAIVQAVTHYSDPELLAEVSCGLGEAMVGLNLNDKK 300

Query: 1302 VER 1294
            VER
Sbjct: 301  VER 303


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