BLASTX nr result

ID: Coptis25_contig00006727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006727
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consol...   380   e-103
gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consol...   377   e-102
gb|AFK33699.1| unknown [Lotus japonicus]                              371   e-100
emb|CBI17927.3| unnamed protein product [Vitis vinifera]              369   1e-99
ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase...   369   1e-99

>gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consolida orientalis]
          Length = 319

 Score =  380 bits (976), Expect = e-103
 Identities = 213/352 (60%), Positives = 242/352 (68%), Gaps = 14/352 (3%)
 Frame = -3

Query: 1214 MAVALKPTCFLPSSNRNFNNSLPRTLSLVPV----------MASLSVTTPV----VGLSQ 1077
            MA A K TCFL SSN   N  L  +   +            MASL+V  P     V LS+
Sbjct: 1    MAAAFKSTCFLQSSNPTNNLFLRSSTQKLKTSNISTKSRISMASLAVAPPTAATAVSLSE 60

Query: 1076 TFTTLRQQGKVAFIPYIXXXXXXXXXXXXXXXXXXXXXXXXXXVAFIPYITAGDPDLKTT 897
            TF  L++QG+VAFI                                 P+ITAGDPDL TT
Sbjct: 61   TFIRLKEQGRVAFI---------------------------------PFITAGDPDLSTT 87

Query: 896  AEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMS 717
            AEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR LA+GTN +AI +ML+ ++PQ+S
Sbjct: 88   AEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRVLARGTNFDAILAMLEGVVPQLS 147

Query: 716  CPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNEIELVXXX 537
            CP+ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET +LR+EALKN+IEL+   
Sbjct: 148  CPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEETAMLREEALKNQIELILLT 207

Query: 536  XXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXXQEIKEASNKPVAVGFGI 357
                 TDRMKAIVEASEGFVYL                     QEIKEASNKPVAVGFGI
Sbjct: 208  TPTTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSLLQEIKEASNKPVAVGFGI 267

Query: 356  SAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAFTRSLKAALP 201
            S P+HVKQ+ GWGADGVIVGSAMV+LL  AK+PEEGL+ELEAFT+SL+AA+P
Sbjct: 268  STPEHVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEAFTKSLRAAIP 319


>gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consolida orientalis]
          Length = 319

 Score =  377 bits (968), Expect = e-102
 Identities = 212/352 (60%), Positives = 241/352 (68%), Gaps = 14/352 (3%)
 Frame = -3

Query: 1214 MAVALKPTCFLPSSNRNFNNSLPRTLSLVPV----------MASLSVTTPV----VGLSQ 1077
            MA A K TCFL SSN   N  L  +   +            MASL+V  P     V LS+
Sbjct: 1    MAAAFKSTCFLQSSNPTNNLFLRSSTQKLKTSNISTKSRISMASLAVAPPTAATAVSLSE 60

Query: 1076 TFTTLRQQGKVAFIPYIXXXXXXXXXXXXXXXXXXXXXXXXXXVAFIPYITAGDPDLKTT 897
            TF  L++QG+VAFI                                 P+ITAGDPDL TT
Sbjct: 61   TFIRLKEQGRVAFI---------------------------------PFITAGDPDLSTT 87

Query: 896  AEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMS 717
            AEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALA+GTN +AI +ML+ ++PQ+S
Sbjct: 88   AEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALARGTNFDAILAMLEGVVPQLS 147

Query: 716  CPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNEIELVXXX 537
            CP+ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET +LR+EALKN+IEL+   
Sbjct: 148  CPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEETAMLREEALKNQIELILLT 207

Query: 536  XXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXXQEIKEASNKPVAVGFGI 357
                 TDRMKAIVEASEGFVYL                     QEIKE SNKPVAVGFGI
Sbjct: 208  TPTTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSLLQEIKETSNKPVAVGFGI 267

Query: 356  SAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAFTRSLKAALP 201
            S P+ VKQ+ GWGADGVIVGSAMV+LL  AK+PEEGL+ELEAFT+SL+AA+P
Sbjct: 268  STPEQVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEAFTKSLRAAIP 319


>gb|AFK33699.1| unknown [Lotus japonicus]
          Length = 311

 Score =  371 bits (953), Expect = e-100
 Identities = 210/346 (60%), Positives = 240/346 (69%), Gaps = 8/346 (2%)
 Frame = -3

Query: 1214 MAVALKPTCFL----PSSNRNFNNSLPRTLSLV----PVMASLSVTTPVVGLSQTFTTLR 1059
            MA+ALK +CF     P +      S  + +  V    PV A  ++ T  VGLS+TF+ L+
Sbjct: 1    MAIALKSSCFFQVKKPEAGFPVYFSSKKAIIWVKRNTPVAAIRTMET--VGLSETFSRLK 58

Query: 1058 QQGKVAFIPYIXXXXXXXXXXXXXXXXXXXXXXXXXXVAFIPYITAGDPDLKTTAEALKV 879
            +QGKVAFI                                 PYITAGDPDL TTAEALKV
Sbjct: 59   KQGKVAFI---------------------------------PYITAGDPDLSTTAEALKV 85

Query: 878  LDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLKEIIPQMSCPIALF 699
            LDSCGSDIIELGVPYSDPLADGPVIQAAATR+LA+GTN NAI SMLKE+ PQ+SCP+ALF
Sbjct: 86   LDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAIISMLKEVTPQLSCPVALF 145

Query: 698  TYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNEIELVXXXXXXXXT 519
            +YYNPILKRG   FM+TI+D GVHGLVVPDVPLEETEILR EA KN IELV         
Sbjct: 146  SYYNPILKRGTDKFMSTIRDSGVHGLVVPDVPLEETEILRTEAKKNGIELVLLTTPTTPI 205

Query: 518  DRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXXQEIKEASNKPVAVGFGISAPDHV 339
            DRMKAIV+A+EGFVYL                     QEIKEA++KPVAVGFGIS P+HV
Sbjct: 206  DRMKAIVDAAEGFVYLVSSVGVTGARASVSDKVQALLQEIKEATSKPVAVGFGISKPEHV 265

Query: 338  KQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAFTRSLKAALP 201
            +Q+ GWGADGVIVGSAMVK+LGDAKSP+EGL+ELE FTRSLK+ALP
Sbjct: 266  EQVAGWGADGVIVGSAMVKILGDAKSPQEGLKELENFTRSLKSALP 311


>emb|CBI17927.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  369 bits (946), Expect = 1e-99
 Identities = 196/298 (65%), Positives = 220/298 (73%)
 Frame = -3

Query: 1097 PVVGLSQTFTTLRQQGKVAFIPYIXXXXXXXXXXXXXXXXXXXXXXXXXXVAFIPYITAG 918
            P VGLS+TF  LR+QG+VA IP                                 YITAG
Sbjct: 8    PAVGLSETFDKLRKQGQVALIP---------------------------------YITAG 34

Query: 917  DPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLK 738
            DPDL TTAEALKVLDSCGSDIIELG+PYSDPLADGPVIQAAATR+LA+GTNLNA+ SMLK
Sbjct: 35   DPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADGPVIQAAATRSLARGTNLNAVISMLK 94

Query: 737  EIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNE 558
            E++PQ+SCP+ALF+YYNPILKRGIG FM  IKDVGVHGLVVPDVPLEETEILR E++KN 
Sbjct: 95   EVVPQLSCPVALFSYYNPILKRGIGKFMTIIKDVGVHGLVVPDVPLEETEILRMESIKNN 154

Query: 557  IELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXXQEIKEASNKP 378
            IELV         DRMKAIV ASEGFVYL                     QEIK+A++KP
Sbjct: 155  IELVLLTTPTTPIDRMKAIVAASEGFVYLVSSVGVTGARASVSSRVQTLLQEIKQATSKP 214

Query: 377  VAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAFTRSLKAAL 204
            VAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+LG+AKSPEEGL+ELE FT+SLK+AL
Sbjct: 215  VAVGFGISKPEHVKQVVAWGADGVIVGSAMVKVLGEAKSPEEGLKELETFTKSLKSAL 272


>ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Vitis
            vinifera]
          Length = 316

 Score =  369 bits (946), Expect = 1e-99
 Identities = 196/298 (65%), Positives = 220/298 (73%)
 Frame = -3

Query: 1097 PVVGLSQTFTTLRQQGKVAFIPYIXXXXXXXXXXXXXXXXXXXXXXXXXXVAFIPYITAG 918
            P VGLS+TF  LR+QG+VA IP                                 YITAG
Sbjct: 51   PAVGLSETFDKLRKQGQVALIP---------------------------------YITAG 77

Query: 917  DPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKGTNLNAIFSMLK 738
            DPDL TTAEALKVLDSCGSDIIELG+PYSDPLADGPVIQAAATR+LA+GTNLNA+ SMLK
Sbjct: 78   DPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADGPVIQAAATRSLARGTNLNAVISMLK 137

Query: 737  EIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEETEILRKEALKNE 558
            E++PQ+SCP+ALF+YYNPILKRGIG FM  IKDVGVHGLVVPDVPLEETEILR E++KN 
Sbjct: 138  EVVPQLSCPVALFSYYNPILKRGIGKFMTIIKDVGVHGLVVPDVPLEETEILRMESIKNN 197

Query: 557  IELVXXXXXXXXTDRMKAIVEASEGFVYLXXXXXXXXXXXXXXXXXXXXXQEIKEASNKP 378
            IELV         DRMKAIV ASEGFVYL                     QEIK+A++KP
Sbjct: 198  IELVLLTTPTTPIDRMKAIVAASEGFVYLVSSVGVTGARASVSSRVQTLLQEIKQATSKP 257

Query: 377  VAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLQELEAFTRSLKAAL 204
            VAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+LG+AKSPEEGL+ELE FT+SLK+AL
Sbjct: 258  VAVGFGISKPEHVKQVVAWGADGVIVGSAMVKVLGEAKSPEEGLKELETFTKSLKSAL 315


Top