BLASTX nr result

ID: Coptis25_contig00006726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006726
         (2071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521265.1| PREDICTED: indole-3-glycerol phosphate lyase...   117   2e-23
gb|ACU23544.1| unknown [Glycine max]                                  117   2e-23
gb|AFK33699.1| unknown [Lotus japonicus]                              116   3e-23
gb|ABI84259.1| tryptophan synthase alpha chain [Arachis hypogaea]     114   1e-22
ref|XP_003554276.1| PREDICTED: indole-3-glycerol phosphate lyase...   112   3e-22

>ref|XP_003521265.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic-like
            [Glycine max]
          Length = 311

 Score =  117 bits (292), Expect = 2e-23
 Identities = 66/104 (63%), Positives = 70/104 (67%)
 Frame = -2

Query: 2055 KVAFIPYITAGDPNLKTTAEALKVLDSCGSDIIELGVPYSDPLADRPVIQVLFFYFFSFY 1876
            KVAFIPY+TAGDP+L TTAEALKVLDSCGSDIIELGVPYSDPLAD PVIQ          
Sbjct: 62   KVAFIPYVTAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQ---------- 111

Query: 1875 VIICKIFFLKIVY*AVATRALAKGTNLNAIFFMLKEVSTYVCIP 1744
                          A ATR+LAKGTNLNAI  MLKEV   +  P
Sbjct: 112  --------------AAATRSLAKGTNLNAIIDMLKEVVPQLSCP 141


>gb|ACU23544.1| unknown [Glycine max]
          Length = 239

 Score =  117 bits (292), Expect = 2e-23
 Identities = 66/104 (63%), Positives = 70/104 (67%)
 Frame = -2

Query: 2055 KVAFIPYITAGDPNLKTTAEALKVLDSCGSDIIELGVPYSDPLADRPVIQVLFFYFFSFY 1876
            KVAFIPY+TAGDP+L TTAEALKVLDSCGSDIIELGVPYSDPLAD PVIQ          
Sbjct: 62   KVAFIPYVTAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQ---------- 111

Query: 1875 VIICKIFFLKIVY*AVATRALAKGTNLNAIFFMLKEVSTYVCIP 1744
                          A ATR+LAKGTNLNAI  MLKEV   +  P
Sbjct: 112  --------------AAATRSLAKGTNLNAIIDMLKEVVPQLSCP 141


>gb|AFK33699.1| unknown [Lotus japonicus]
          Length = 311

 Score =  116 bits (290), Expect = 3e-23
 Identities = 65/104 (62%), Positives = 70/104 (67%)
 Frame = -2

Query: 2055 KVAFIPYITAGDPNLKTTAEALKVLDSCGSDIIELGVPYSDPLADRPVIQVLFFYFFSFY 1876
            KVAFIPYITAGDP+L TTAEALKVLDSCGSDIIELGVPYSDPLAD PVIQ          
Sbjct: 62   KVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQ---------- 111

Query: 1875 VIICKIFFLKIVY*AVATRALAKGTNLNAIFFMLKEVSTYVCIP 1744
                          A ATR+LA+GTN NAI  MLKEV+  +  P
Sbjct: 112  --------------AAATRSLARGTNFNAIISMLKEVTPQLSCP 141


>gb|ABI84259.1| tryptophan synthase alpha chain [Arachis hypogaea]
          Length = 263

 Score =  114 bits (285), Expect = 1e-22
 Identities = 65/104 (62%), Positives = 69/104 (66%)
 Frame = -2

Query: 2055 KVAFIPYITAGDPNLKTTAEALKVLDSCGSDIIELGVPYSDPLADRPVIQVLFFYFFSFY 1876
            KVAFIPYITAGDP+L TTAEALKVLDSCGSDIIELGVPYSDPLAD PVIQ          
Sbjct: 62   KVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQ---------- 111

Query: 1875 VIICKIFFLKIVY*AVATRALAKGTNLNAIFFMLKEVSTYVCIP 1744
                          A ATR+LAKGTN +AI  MLKEV   +  P
Sbjct: 112  --------------AAATRSLAKGTNFDAIISMLKEVVPQLSCP 141


>ref|XP_003554276.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Glycine
            max]
          Length = 311

 Score =  112 bits (281), Expect = 3e-22
 Identities = 63/104 (60%), Positives = 68/104 (65%)
 Frame = -2

Query: 2055 KVAFIPYITAGDPNLKTTAEALKVLDSCGSDIIELGVPYSDPLADRPVIQVLFFYFFSFY 1876
            KVAFIPYITAGDP+L TTAEALK+LDSCGSDIIELG+PYSDPLAD PVIQ          
Sbjct: 62   KVAFIPYITAGDPDLSTTAEALKLLDSCGSDIIELGIPYSDPLADGPVIQ---------- 111

Query: 1875 VIICKIFFLKIVY*AVATRALAKGTNLNAIFFMLKEVSTYVCIP 1744
                          A ATR+LAKGTN N I  MLKEV   +  P
Sbjct: 112  --------------AAATRSLAKGTNFNVIIDMLKEVVPQLSCP 141


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