BLASTX nr result

ID: Coptis25_contig00006717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006717
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268053.1| PREDICTED: uncharacterized protein LOC100246...    96   2e-30
gb|ACU19160.1| unknown [Glycine max]                                   91   3e-27
ref|XP_003521509.1| PREDICTED: uncharacterized protein LOC100804...    91   1e-26
ref|XP_003554502.1| PREDICTED: uncharacterized protein LOC100785...    93   1e-25
ref|XP_002524113.1| conserved hypothetical protein [Ricinus comm...    92   2e-22

>ref|XP_002268053.1| PREDICTED: uncharacterized protein LOC100246168 [Vitis vinifera]
          Length = 265

 Score = 96.3 bits (238), Expect(2) = 2e-30
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = +1

Query: 853  WLMSLGLGQFVMMFRRANVTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYC 1026
            WL  LGLGQFV +F+R +V KFQL NLTM+KLKDMGA+AVGPRRKLIHAIDCL  PYC
Sbjct: 204  WLALLGLGQFVKIFQRRSVDKFQLINLTMKKLKDMGADAVGPRRKLIHAIDCLCQPYC 261



 Score = 63.5 bits (153), Expect(2) = 2e-30
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 10/231 (4%)
 Frame = +3

Query: 132 MVKRKSGQTAPLATNKEKVHNDHVESSN--VGIEDLHEDDWVIVKKQKXXXXXXXXXXXX 305
           MVK K  Q A L  NK    +    S N    ++ L ED WVIVKKQ+            
Sbjct: 1   MVKPKKRQLAALPANKNGAPSGLSGSVNSKTKVDLLGEDSWVIVKKQRVTILVPPLPVAK 60

Query: 306 XXXXKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKLKNSFDERSWATVPNRRKNI-- 479
                    ++  A  +++   R QV +E  P      L++S  ER  +T    +++I  
Sbjct: 61  ESQMPNPGLSQPQAIPQETNTKRWQVSSEACP------LRDSVVEREKSTSLGSQRDIQV 114

Query: 480 -----TRPTLKSALEGPERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGSKAAKR 644
                +   + ++++ P    G+ + +              G+G+ KP  + G + AAK 
Sbjct: 115 TQKIPSAQPVSTSVKPPRLYFGRGSDNTE------------GVGTFKPQRMLGPNSAAK- 161

Query: 645 QNTCHQGSTVLLRPISCFSVTGVQ-NRMIRASNLERKLEKVGGLTRWLMSL 794
                +  T+L  PI+ F + GV  N+ +RA NLERKL++ GGL+RWL  L
Sbjct: 162 ---AIKRPTLLHEPIN-FPIGGVLLNQRMRALNLERKLQRAGGLSRWLALL 208


>gb|ACU19160.1| unknown [Glycine max]
          Length = 261

 Score = 90.5 bits (223), Expect(2) = 3e-27
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = +1

Query: 853  WLMSLGLGQFVMMFRRANVTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYCLN 1032
            WL SLGL QFV +F+  +++K+QL NLTM+KLKDMGA+AVGPRRKLIHA+DC+  PYC  
Sbjct: 200  WLTSLGLAQFVRIFQGNSLSKYQLVNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFE 259

Query: 1033 KL 1038
             L
Sbjct: 260  AL 261



 Score = 58.9 bits (141), Expect(2) = 3e-27
 Identities = 60/221 (27%), Positives = 90/221 (40%)
 Frame = +3

Query: 132 MVKRKSGQTAPLATNKEKVHNDHVESSNVGIEDLHEDDWVIVKKQKXXXXXXXXXXXXXX 311
           MVK K  +T  +   K    +  + +S  G     + DW+IVKKQ+              
Sbjct: 1   MVKTKQKRTGKVPGKKSGTSSHCLVNSGNGDNQHEDSDWIIVKKQRVTILVPAAPLNERS 60

Query: 312 XXKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKLKNSFDERSWATVPNRRKNITRPT 491
                  N +     +   +  Q+  E +    SG      +E   AT+  R++      
Sbjct: 61  LTANQGPNHMHLMPPEIASNHVQLPMETSTMHPSG------NEHEKATLALRKETRAERR 114

Query: 492 LKSALEGPERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGSKAAKRQNTCHQGST 671
               L  P  V   S   +  S+  N H     L S K L ++  SK  K+  T      
Sbjct: 115 TPPTLPKPTVVNPPSLDEIIESE--NPHQT-NSLKSHKLLGIFDTSKVIKQPRT------ 165

Query: 672 VLLRPISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSL 794
            LL P    ++  + N+ +RASNLERKLE+ GGL++WL SL
Sbjct: 166 -LLAPRRSSNLETL-NKSLRASNLERKLERAGGLSKWLTSL 204


>ref|XP_003521509.1| PREDICTED: uncharacterized protein LOC100804141 [Glycine max]
          Length = 261

 Score = 90.5 bits (223), Expect(2) = 1e-26
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = +1

Query: 853  WLMSLGLGQFVMMFRRANVTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYCLN 1032
            WL SLGL QFV +F+  +++K+QL NLTM+KLKDMGA+AVGPRRKLIHA+DC+  PYC  
Sbjct: 200  WLTSLGLAQFVRIFQGNSLSKYQLVNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFE 259

Query: 1033 KL 1038
             L
Sbjct: 260  AL 261



 Score = 57.0 bits (136), Expect(2) = 1e-26
 Identities = 60/221 (27%), Positives = 89/221 (40%)
 Frame = +3

Query: 132 MVKRKSGQTAPLATNKEKVHNDHVESSNVGIEDLHEDDWVIVKKQKXXXXXXXXXXXXXX 311
           MVK K  +T  +   K    +  + +S  G     + DW+IVKKQ+              
Sbjct: 1   MVKTKQKRTGKVPGKKSGTSSHCLVNSGNGDNQHEDSDWIIVKKQRVTILVPAAPLNERS 60

Query: 312 XXKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKLKNSFDERSWATVPNRRKNITRPT 491
                  N +     +   +  Q+  E +    SG      +E   AT+  R++      
Sbjct: 61  LTANQGPNHMHLMPPEIASNHVQLPMETSTMHPSG------NEHEKATLALRKETRAERR 114

Query: 492 LKSALEGPERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGSKAAKRQNTCHQGST 671
               L  P  V   S   +  S+  N H     L S K L +   SK  K+  T      
Sbjct: 115 APPTLPKPTVVNPPSLDEIIESE--NPHQT-NSLKSHKLLGISDTSKVIKQPRT------ 165

Query: 672 VLLRPISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSL 794
            LL P    ++  + N+ +RASNLERKLE+ GGL++WL SL
Sbjct: 166 -LLAPRRSSNLETL-NKSLRASNLERKLERAGGLSKWLTSL 204


>ref|XP_003554502.1| PREDICTED: uncharacterized protein LOC100785969 [Glycine max]
          Length = 262

 Score = 92.8 bits (229), Expect(2) = 1e-25
 Identities = 42/62 (67%), Positives = 52/62 (83%)
 Frame = +1

Query: 853  WLMSLGLGQFVMMFRRANVTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYCLN 1032
            WL SLGLGQFV +F+  +++K+QL NLTM+KLKDMGA+AVGPRRKLIHA+DC+  PYC  
Sbjct: 201  WLTSLGLGQFVRIFQGNSLSKYQLVNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFE 260

Query: 1033 KL 1038
             L
Sbjct: 261  AL 262



 Score = 50.8 bits (120), Expect(2) = 1e-25
 Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 6/227 (2%)
 Frame = +3

Query: 132 MVKRKSGQTAPLATNKEKVHNDHVESSNVGIEDLHEDDWVIVKKQKXXXXXXXXXXXXXX 311
           MVK K  +T  +   K    +  +  S  G     + DW+IVKKQ+              
Sbjct: 1   MVKTKQKRTGEVPGKKSGTSSHCLVDSGDGDNQHEDSDWIIVKKQRVTILVPAAPLNDRS 60

Query: 312 XXKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSGKL--KNSFDERSWATVPNRRKNITR 485
                  N +     +   +  Q+  + +    SGK   K +       T   R+  +T 
Sbjct: 61  LIANQGPNHMHLMPPEIASNHVQLPMQTSTVHPSGKEHEKATLLAVQKETHAERKALLTL 120

Query: 486 PTLKSALEGP----ERVCGKSTAHLSSSKFVNDHNMYGGLGSSKPLMVYGGSKAAKRQNT 653
           P  KS +  P    +R+  ++   ++S K    H + G         V   SK  K+  T
Sbjct: 121 P--KSTVVNPPSLDQRIESENPQAMNSLKL---HKLLG---------VSDASKVIKQPRT 166

Query: 654 CHQGSTVLLRPISCFSVTGVQNRMIRASNLERKLEKVGGLTRWLMSL 794
                  LL P   F+   + N+ +RASNLERKLE+ GGL+ WL SL
Sbjct: 167 -------LLAPRRSFNQETL-NKNLRASNLERKLERAGGLSNWLTSL 205


>ref|XP_002524113.1| conserved hypothetical protein [Ricinus communis]
            gi|223536681|gb|EEF38323.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 253

 Score = 92.0 bits (227), Expect(2) = 2e-22
 Identities = 42/58 (72%), Positives = 51/58 (87%)
 Frame = +1

Query: 853  WLMSLGLGQFVMMFRRANVTKFQLSNLTMEKLKDMGANAVGPRRKLIHAIDCLSHPYC 1026
            WL S+GLGQFV +F+  N++KFQL NLTM+KLKDMGA+AVGPRRKL+HAIDC+  PYC
Sbjct: 193  WLASIGLGQFVKIFQ-GNISKFQLVNLTMKKLKDMGADAVGPRRKLMHAIDCICQPYC 249



 Score = 40.8 bits (94), Expect(2) = 2e-22
 Identities = 52/203 (25%), Positives = 79/203 (38%), Gaps = 17/203 (8%)
 Frame = +3

Query: 237 EDDWVIVKKQKXXXXXXXXXXXXXXXXKGLRSNKVSAKFRKSKRSRAQVLNEVNPRTRSG 416
           ED WVIVKKQ+                       V+       R++   + +  PR    
Sbjct: 28  EDSWVIVKKQR-----------------------VTILIPPQPRAQGSTVPKPGPRKLEA 64

Query: 417 KLKNSFDERSWATV--PNR------RKNITRPTLKSALEGPERVCGKSTAHLSSSKFVND 572
               + + +S   V  PNR      +  +T  T    +E   R+    T HLS+S  +  
Sbjct: 65  MPIEAVNNKSSKPVETPNRMPSVEEQAKVTSVTANRCIEVSTRI---PTQHLSASHKLPR 121

Query: 573 HNM---------YGGLGSSKPLMVYGGSKAAKRQNTCHQGSTVLLRPISCFSVTGVQNRM 725
            N+         +    S   L V   SK  K+         +LL        + + N+ 
Sbjct: 122 LNVEMEAENPDRFHTFKSHNVLGVSNVSKTIKQPR-------LLLGQRHFLDGSILLNQR 174

Query: 726 IRASNLERKLEKVGGLTRWLMSL 794
           +RAS LE+KL+K GGL+RWL S+
Sbjct: 175 LRASLLEKKLQKAGGLSRWLASI 197


Top