BLASTX nr result
ID: Coptis25_contig00006711
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006711 (2047 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002511095.1| Signal recognition particle 68 kDa protein, ... 880 0.0 ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|2... 858 0.0 ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|2... 848 0.0 ref|XP_004154654.1| PREDICTED: signal recognition particle 68 kD... 847 0.0 ref|XP_003630590.1| Signal recognition particle 68 kDa protein [... 842 0.0 >ref|XP_002511095.1| Signal recognition particle 68 kDa protein, putative [Ricinus communis] gi|223550210|gb|EEF51697.1| Signal recognition particle 68 kDa protein, putative [Ricinus communis] Length = 594 Score = 880 bits (2275), Expect = 0.0 Identities = 434/576 (75%), Positives = 509/576 (88%) Frame = +3 Query: 135 PKFSIHVLQLLKSAQMQHGLRHGDXXXXXXXXXXXXXXXXKSLKFTHGRGKYTKKAITES 314 P++SI+VLQLLKSAQMQHGLRHGD KSLKFTHGRGKYT++AITES Sbjct: 18 PRYSINVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTRRAITES 77 Query: 315 TITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFADLCGT 494 T+TEVR+LH+VLY AERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAV+WA LF+ LC Sbjct: 78 TVTEVRFLHLVLYSAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVQWANLFSQLCAA 137 Query: 495 KGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGKYGDLENQVLCRE 674 KGDSRTSLEAEAYA+YM G+LLFE D+NW+TAL+NF +AR VYEELGKYGDLENQVLCRE Sbjct: 138 KGDSRTSLEAEAYAAYMNGNLLFEQDRNWDTALKNFISARAVYEELGKYGDLENQVLCRE 197 Query: 675 RVEELEPSVRYCLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVT 854 RVEELEPS+RYC HK+G+ N++T +LL IG+MEGPALDLFK KLEAVM EARSQQAAS+T Sbjct: 198 RVEELEPSIRYCRHKIGQSNLQTSDLLQIGEMEGPALDLFKTKLEAVMAEARSQQAASLT 257 Query: 855 EFRWLGHRFPISNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSC 1034 EF WLGH+FPISNAKTRV ILKAQELEK++HGSAADSLPAEKKLV+FDKIFAAYH+ARSC Sbjct: 258 EFHWLGHKFPISNAKTRVAILKAQELEKDLHGSAADSLPAEKKLVVFDKIFAAYHEARSC 317 Query: 1035 IRTDLVTAGNAENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGT 1214 IR+DLV+AGNA++VKDDL+GLDKAVSAVLGQRTIERNQLLVSIAKSK ++ DD+ K T Sbjct: 318 IRSDLVSAGNADSVKDDLSGLDKAVSAVLGQRTIERNQLLVSIAKSKFIKRRDDKNEKLT 377 Query: 1215 KPEGLVRLYDLLIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYS 1394 +PE LVRLYDLL+QNT+DL+DLVSSGRD K EEVAF+E+ ALR L F+A+RCFYLAKSYS Sbjct: 378 RPEELVRLYDLLLQNTSDLSDLVSSGRDTKPEEVAFSEDCALRSLAFRAQRCFYLAKSYS 437 Query: 1395 LAGKRTEAYALYCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIM 1574 LAGKRTEAY+LYCRAR++ ++ALQK +S++ D++M++ELK L N+CRSN CIEHA+GIM Sbjct: 438 LAGKRTEAYSLYCRARSLSENALQKFQSLNNTDEIMVKELKTLYNECRSNSCIEHASGIM 497 Query: 1575 EEVKAPEKLSEGVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQS 1754 E+ KAPE LS+ VS ISLSG +K EKFLL+KLDVYESAVGD + +A P+I+ FPP FQ+ Sbjct: 498 EDEKAPENLSKKVSAISLSGGDKKVEKFLLEKLDVYESAVGDPHVKAPPRIEVFPPAFQT 557 Query: 1755 VPNNPIILDLAFDTIEFPSLENRMKKEKKGFMSRFF 1862 +P NPIILDLA++ I+FPSLENRMKK+KKGF+SR + Sbjct: 558 IPRNPIILDLAYNYIDFPSLENRMKKDKKGFISRLW 593 >ref|XP_002322302.1| predicted protein [Populus trichocarpa] gi|222869298|gb|EEF06429.1| predicted protein [Populus trichocarpa] Length = 601 Score = 858 bits (2216), Expect = 0.0 Identities = 428/603 (70%), Positives = 501/603 (83%) Frame = +3 Query: 54 MGKENNNVSTQMEXXXXXXXXXXXXXXPKFSIHVLQLLKSAQMQHGLRHGDXXXXXXXXX 233 MGKEN ++ +++ P++SI+VLQLLKSAQMQHGLRHGD Sbjct: 1 MGKENEAIAMEVDGPKSNNSDQIN---PRYSINVLQLLKSAQMQHGLRHGDYARYRRYCT 57 Query: 234 XXXXXXXKSLKFTHGRGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPN 413 KSLKFTHGRGKYT++AI EST+TEVRYLH+VLY AERAWSHAMEKRQL DGPN Sbjct: 58 ARLRRLYKSLKFTHGRGKYTRRAINESTVTEVRYLHMVLYTAERAWSHAMEKRQLLDGPN 117 Query: 414 ARQRIYLIGRLRKAVKWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETAL 593 A+QRIYLIGRLRKAVKWA LF+ LC KGDSRTSLEAEAYASYM G LLFE D+NW+TAL Sbjct: 118 AKQRIYLIGRLRKAVKWADLFSGLCAAKGDSRTSLEAEAYASYMNGLLLFEQDRNWDTAL 177 Query: 594 RNFQNARNVYEELGKYGDLENQVLCRERVEELEPSVRYCLHKVGEKNIKTLELLDIGKME 773 +NF ++R VYEELGKYGDLENQVLCRERVEELEPS+RYC HK+GE N+KT ELL IG+ME Sbjct: 178 KNFISSRAVYEELGKYGDLENQVLCRERVEELEPSIRYCRHKIGESNLKTSELLQIGEME 237 Query: 774 GPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPISNAKTRVTILKAQELEKEVHGS 953 GPALDLFKAKLEA M EARSQQAAS+TEF WLGHRFPISNAKTRV ILKAQELEK++HG Sbjct: 238 GPALDLFKAKLEAAMAEARSQQAASLTEFHWLGHRFPISNAKTRVAILKAQELEKDLHGP 297 Query: 954 AADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNAENVKDDLNGLDKAVSAVLGQRT 1133 ADS+PAEKKL +FDKIF AYH+ARS IR+DLV+AGNA++VKD+LNGLDKAVSAVLGQRT Sbjct: 298 TADSIPAEKKLAVFDKIFTAYHEARSFIRSDLVSAGNADSVKDELNGLDKAVSAVLGQRT 357 Query: 1134 IERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDLLIQNTTDLTDLVSSGRDRKSEE 1313 IERNQLLVSIAKSK++R+ DD+ K TKPE LVRLYDLL+QNT DL+DLVSSGRDRK EE Sbjct: 358 IERNQLLVSIAKSKLTRRRDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDRKPEE 417 Query: 1314 VAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYALYCRARTIVDDALQKLKSISKPD 1493 V F E+ LR F+A+RCFYLAKSYS AGKR EAY LYC AR++ ++AL+K ++++ D Sbjct: 418 VEFTEDCDLRSTAFRAQRCFYLAKSYSSAGKRAEAYVLYCHARSLAENALKKFQTVTSTD 477 Query: 1494 KVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSEGVSNISLSGAARKPEKFLLDKL 1673 +V I+EL+ LNN+CR+N CIEHA GIME K E LS+ VS ISLSG +K EKFLL+KL Sbjct: 478 EVTIKELRTLNNECRANSCIEHATGIMEHEKVSENLSKKVSTISLSGVDKKVEKFLLEKL 537 Query: 1674 DVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLAFDTIEFPSLENRMKKEKKGFMS 1853 DVYESAVG+ N ++ P+I+ FPP FQS+P NPI+LDLA++ I+FPSLENRMKK+KKGF+S Sbjct: 538 DVYESAVGEPNVKSVPRIEVFPPAFQSIPRNPIVLDLAYNCIDFPSLENRMKKDKKGFIS 597 Query: 1854 RFF 1862 R + Sbjct: 598 RLW 600 >ref|XP_002318768.1| predicted protein [Populus trichocarpa] gi|222859441|gb|EEE96988.1| predicted protein [Populus trichocarpa] Length = 602 Score = 848 bits (2191), Expect = 0.0 Identities = 423/577 (73%), Positives = 492/577 (85%), Gaps = 1/577 (0%) Frame = +3 Query: 135 PKFSIH-VLQLLKSAQMQHGLRHGDXXXXXXXXXXXXXXXXKSLKFTHGRGKYTKKAITE 311 P++SI+ +LQLLKSAQMQHGLRHGD KSLKFTHGRGKYT++A+ E Sbjct: 25 PRYSINGILQLLKSAQMQHGLRHGDYARYRRYCIARLRRLYKSLKFTHGRGKYTRRAMNE 84 Query: 312 STITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFADLCG 491 ST+TEVRYLH+VLY AERAWSHAMEKRQL DGPNA+QRIYLIGRLRKAVKWA LF+ LC Sbjct: 85 STVTEVRYLHLVLYTAERAWSHAMEKRQLLDGPNAKQRIYLIGRLRKAVKWADLFSRLCA 144 Query: 492 TKGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGKYGDLENQVLCR 671 KGDSRTSLEAEAYAS M G LLFE D+NW+TAL+NF +AR VYEELGKYGDLENQVLCR Sbjct: 145 AKGDSRTSLEAEAYASCMNGLLLFEQDRNWDTALKNFISARAVYEELGKYGDLENQVLCR 204 Query: 672 ERVEELEPSVRYCLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASV 851 ERVEELEPSVRYC HK+GE N+KT ELL IG+MEGPALDLFKAKLEA M EARSQQAAS+ Sbjct: 205 ERVEELEPSVRYCRHKIGESNLKTSELLQIGEMEGPALDLFKAKLEAAMAEARSQQAASL 264 Query: 852 TEFRWLGHRFPISNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARS 1031 TEFRWLGHRFPISNAKTRV+ILKAQELEK++HG AADSLP EKKL +FDKI+ AY +ARS Sbjct: 265 TEFRWLGHRFPISNAKTRVSILKAQELEKDLHGPAADSLPVEKKLAVFDKIYTAYQEARS 324 Query: 1032 CIRTDLVTAGNAENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKG 1211 IR+DL +AGNA++VKDDLNGLDKAV AVLGQRTIERNQLLVSIAKSK++R DD+ K Sbjct: 325 FIRSDLASAGNADSVKDDLNGLDKAVGAVLGQRTIERNQLLVSIAKSKLARHRDDKNEKV 384 Query: 1212 TKPEGLVRLYDLLIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSY 1391 TKPE LVRLYDLL+QNT DL+DLVSSGRDRK EEVAF+E+ LR + F+A+RCFYLAKSY Sbjct: 385 TKPEELVRLYDLLLQNTGDLSDLVSSGRDRKPEEVAFSEDCVLRSMAFRAQRCFYLAKSY 444 Query: 1392 SLAGKRTEAYALYCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGI 1571 S AGKRTEAYALYC AR++ ++AL+K +++ D+ M +ELK L N+CR+N CIEHA GI Sbjct: 445 SSAGKRTEAYALYCHARSLAENALKKFQTMMDTDEAMTKELKTLYNECRANSCIEHATGI 504 Query: 1572 MEEVKAPEKLSEGVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQ 1751 ME+ KAPE LS+ +S ISLSG +K EKFL++KLDVYESAVG+ N ++ P+I FPP FQ Sbjct: 505 MEDEKAPENLSKKISTISLSGVDKKAEKFLVEKLDVYESAVGEPNVKSVPRIGVFPPAFQ 564 Query: 1752 SVPNNPIILDLAFDTIEFPSLENRMKKEKKGFMSRFF 1862 S+P NPI+LDLA++ I+FPSLENRMKK+KKGF+SR + Sbjct: 565 SIPRNPIVLDLAYNCIDFPSLENRMKKDKKGFISRLW 601 >ref|XP_004154654.1| PREDICTED: signal recognition particle 68 kDa protein-like [Cucumis sativus] Length = 594 Score = 847 bits (2189), Expect = 0.0 Identities = 420/576 (72%), Positives = 493/576 (85%) Frame = +3 Query: 135 PKFSIHVLQLLKSAQMQHGLRHGDXXXXXXXXXXXXXXXXKSLKFTHGRGKYTKKAITES 314 P+FS++VLQLLKSAQMQHGLRHGD KSLKFTHGRGKYTK+AIT+S Sbjct: 19 PRFSVNVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYTKRAITQS 78 Query: 315 TITEVRYLHVVLYMAERAWSHAMEKRQLPDGPNARQRIYLIGRLRKAVKWATLFADLCGT 494 T++EVRYLHVVLY AERAWSHAMEKRQLPDGPN RQRIYLIGRLRKAVKWATLFA LC + Sbjct: 79 TVSEVRYLHVVLYTAERAWSHAMEKRQLPDGPNPRQRIYLIGRLRKAVKWATLFAQLCAS 138 Query: 495 KGDSRTSLEAEAYASYMKGSLLFELDKNWETALRNFQNARNVYEELGKYGDLENQVLCRE 674 KGDSRTSLEAEAYASYM G+LLFE D+NW+TAL NF+ AR VYEELGK GDLENQVLCRE Sbjct: 139 KGDSRTSLEAEAYASYMTGNLLFEQDRNWDTALLNFKRARAVYEELGKVGDLENQVLCRE 198 Query: 675 RVEELEPSVRYCLHKVGEKNIKTLELLDIGKMEGPALDLFKAKLEAVMDEARSQQAASVT 854 RVEELEPS+RYCLHK+G+ N++ ELL IG+MEGPALDLFKAKLEAVM EARSQQA S+T Sbjct: 199 RVEELEPSIRYCLHKIGKSNLQASELLHIGEMEGPALDLFKAKLEAVMSEARSQQAVSMT 258 Query: 855 EFRWLGHRFPISNAKTRVTILKAQELEKEVHGSAADSLPAEKKLVIFDKIFAAYHDARSC 1034 EF WLGHRFPISNAKTRV+ILKA+ELEK++ S+ADSLPAEK+L IFDKIFAAYH+ARS Sbjct: 259 EFHWLGHRFPISNAKTRVSILKARELEKDLQ-SSADSLPAEKRLSIFDKIFAAYHEARSS 317 Query: 1035 IRTDLVTAGNAENVKDDLNGLDKAVSAVLGQRTIERNQLLVSIAKSKISRQLDDRAAKGT 1214 IR+DLV+AGNAE+VKDDL+GLDKAVSAVLGQRTIERNQLLV IAKSK+ R+ D++ K T Sbjct: 318 IRSDLVSAGNAESVKDDLSGLDKAVSAVLGQRTIERNQLLVKIAKSKLVRRHDEKNEKVT 377 Query: 1215 KPEGLVRLYDLLIQNTTDLTDLVSSGRDRKSEEVAFAEEYALRGLVFQAERCFYLAKSYS 1394 KPE LVRLYDLL+QN DL+DLVSSGRDR+ EEV FAEE +L+ L F+ ERCFYLAKSYS Sbjct: 378 KPEELVRLYDLLLQNIADLSDLVSSGRDRRQEEVTFAEECSLKSLAFRGERCFYLAKSYS 437 Query: 1395 LAGKRTEAYALYCRARTIVDDALQKLKSISKPDKVMIQELKVLNNKCRSNICIEHAAGIM 1574 LAGKR EAY LYC AR++++DA+QK ++ + D +I+ELK L +CR N C+EHA GI+ Sbjct: 438 LAGKRAEAYVLYCHARSLIEDAIQKFRTANISDPKLIEELKTLIEECRVNSCVEHATGII 497 Query: 1575 EEVKAPEKLSEGVSNISLSGAARKPEKFLLDKLDVYESAVGDTNTRAGPQIDAFPPPFQS 1754 EE KAPE LS+ +SN+SL+GA +K K+LL LD YESAVGD+N + P+I+AFPP FQ+ Sbjct: 498 EEAKAPENLSKKISNMSLTGAEKKSAKYLLQSLDNYESAVGDSNIKTAPRIEAFPPAFQA 557 Query: 1755 VPNNPIILDLAFDTIEFPSLENRMKKEKKGFMSRFF 1862 +P NPI+LD+AF+ I+FPSLENRMKK++KGF+SR + Sbjct: 558 IPRNPIVLDIAFNFIDFPSLENRMKKDRKGFISRLW 593 >ref|XP_003630590.1| Signal recognition particle 68 kDa protein [Medicago truncatula] gi|355524612|gb|AET05066.1| Signal recognition particle 68 kDa protein [Medicago truncatula] Length = 603 Score = 842 bits (2175), Expect = 0.0 Identities = 420/606 (69%), Positives = 501/606 (82%), Gaps = 3/606 (0%) Frame = +3 Query: 54 MGKENNNVSTQMEXXXXXXXXXXXXXXPKFSIHVLQLLKSAQMQHGLRHGDXXXXXXXXX 233 MGKEN + + +++ PKFSI VLQLLKSAQMQHGLRHGD Sbjct: 1 MGKENQSSAMEVDDPKSTNSDQIV---PKFSITVLQLLKSAQMQHGLRHGDYTRYRRYCT 57 Query: 234 XXXXXXXKSLKFTHGRGKYTKKAITESTITEVRYLHVVLYMAERAWSHAMEKRQLPDGPN 413 KSLKFTHGRGKYTK+ +TES +TEVR+LHV+LY AERAWSHAMEKRQLP+GPN Sbjct: 58 ARLRRLYKSLKFTHGRGKYTKRTLTESNVTEVRFLHVILYSAERAWSHAMEKRQLPNGPN 117 Query: 414 ARQRIYLIGRLRKAVKWATLFADLCGTKGDSRTSLEAEAYASYMKGSLLFELDKNWETAL 593 A QRIYLIGRLRKAVKWATLF+ C K DSRTSLEAEAY SYMKGSLLFE D+NW+ AL Sbjct: 118 ASQRIYLIGRLRKAVKWATLFSQFCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVAL 177 Query: 594 RNFQNARNVYEELGKYGDLENQVLCRERVEELEPSVRYCLHKVGEKNIKTLELLDIGKME 773 ++F++AR VYEELGKYGDL+NQVLCRERVEELEPS+RYCLHK+G+ N++ ELL+IG ME Sbjct: 178 KHFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLNIGDME 237 Query: 774 GPALDLFKAKLEAVMDEARSQQAASVTEFRWLGHRFPISNAKTRVTILKAQELEKEVHGS 953 GPALDLFKAKLEA M EARSQQAAS+TEF WLGHRFPISNAKTRV ILKAQELEK++HG Sbjct: 238 GPALDLFKAKLEAAMAEARSQQAASMTEFHWLGHRFPISNAKTRVAILKAQELEKDIHGP 297 Query: 954 AADSLPAEKKLVIFDKIFAAYHDARSCIRTDLVTAGNAENVKDDLNGLDKAVSAVLGQRT 1133 A+++ A+K+LV FDKIF+AYHDAR CIR DL TAGNAE+VKDDLNGLDKAVSAVLG+RT Sbjct: 298 LAENISADKRLVTFDKIFSAYHDARGCIRADLATAGNAESVKDDLNGLDKAVSAVLGERT 357 Query: 1134 IERNQLLVSIAKSKISRQLDDRAAKGTKPEGLVRLYDLLIQNTTDLTDLVSSGRDRKSEE 1313 IERN LLV +AKSK++++ DD+ K TKPE LVRLYDLL+QNT+DL+DLVSSGRD+K EE Sbjct: 358 IERNLLLVKVAKSKLAKRNDDKNEKLTKPEELVRLYDLLLQNTSDLSDLVSSGRDQKPEE 417 Query: 1314 VAFAEEYALRGLVFQAERCFYLAKSYSLAGKRTEAYALYCRARTIVDDALQKLKSISKPD 1493 V+FAEE + + L F+AERCFY+AKSYS+AGKR EAYALYCRAR++ +DAL KL+ + Sbjct: 418 VSFAEECSCKSLAFRAERCFYVAKSYSVAGKRAEAYALYCRARSLAEDALGKLQKLEGNS 477 Query: 1494 KVMIQELKVLNNKCRSNICIEHAAGIMEEVKAPEKLSEGVSNISLSGAARKPEKFLLDKL 1673 K M++EL+VL N+CRSN CIEHA GIMEE + E +SEG+SNISL+GA R EKFLL+KL Sbjct: 478 KTMVKELEVLCNECRSNSCIEHALGIMEEKRTQENISEGISNISLTGAERL-EKFLLEKL 536 Query: 1674 DVYESAVGDTNTRAGPQIDAFPPPFQSVPNNPIILDLAFDTIEFPSLENRMKKEKK---G 1844 DVYESAVGD+N ++ P+I FPP FQ++ NPI+LDLA++TIEFP +++RMKK+K+ G Sbjct: 537 DVYESAVGDSNVKSAPRIAPFPPAFQAIARNPIVLDLAYNTIEFPDIQSRMKKDKRAKGG 596 Query: 1845 FMSRFF 1862 F+SR F Sbjct: 597 FISRIF 602