BLASTX nr result

ID: Coptis25_contig00006704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006704
         (3324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpe|CAP64331.1| TPA: putative GID1-like gibberellin receptor [Aq...   590   e-166
gb|ACN86359.1| GID1-4 [Gossypium hirsutum]                            586   e-164
ref|XP_002319576.1| predicted protein [Populus trichocarpa] gi|2...   585   e-164
ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus...   583   e-163
ref|XP_002328407.1| predicted protein [Populus trichocarpa] gi|2...   578   e-162

>tpe|CAP64331.1| TPA: putative GID1-like gibberellin receptor [Aquilegia formosa x
            Aquilegia pubescens]
          Length = 343

 Score =  590 bits (1522), Expect = e-166
 Identities = 286/343 (83%), Positives = 312/343 (90%), Gaps = 1/343 (0%)
 Frame = +2

Query: 1553 MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNILRRPDGTFNRHLAEFLDRKVPANANPV 1732
            MAGSNEVN+NESKM VPLNTWVLISNFKLAY +LRRPDGTFNR+LAEFLDRKVPANANPV
Sbjct: 1    MAGSNEVNINESKMAVPLNTWVLISNFKLAYTMLRRPDGTFNRNLAEFLDRKVPANANPV 60

Query: 1733 DGVFSFDVIIDRATSLLCRIYRMAPEDEVQPSIIELEGPLSNEVV-PVIIFFHGGSFAHS 1909
            DGVFSFDVIIDRAT LLCRIYR A    VQPS ++LE PLS++VV PVI+FFHGGSFAHS
Sbjct: 61   DGVFSFDVIIDRATGLLCRIYRQATAVPVQPSYMQLEQPLSSDVVVPVIVFFHGGSFAHS 120

Query: 1910 SANSAIYDTLSRRLVGNCKAVVVSVNYRRAPENQFPCAYEDGWAALKWVHSRSWLRSGKD 2089
            SANSAIYDTL RRLV NCKAVVVSVNYRRAPEN++PCAY+DG AALKWVHSR+WLRSGKD
Sbjct: 121  SANSAIYDTLCRRLVRNCKAVVVSVNYRRAPENRYPCAYDDGCAALKWVHSRAWLRSGKD 180

Query: 2090 SKAHVYLAGDSSGGNIAHHVAMRAAESGTEVLGNILLNPMFGGMERTESEKRLDGKYFVT 2269
            SKAHVYLAGDSSGGNI H+VA+RA ESG E+LGNILLNPMFGG ER ESEKRLDGKYFVT
Sbjct: 181  SKAHVYLAGDSSGGNIVHNVALRAVESGAEILGNILLNPMFGGAERMESEKRLDGKYFVT 240

Query: 2270 IQDRDWYWRAFLPAGADRNHPACNPFGPNAASLQGIKFPKSLVVVAGLDLSQDWQKGYAK 2449
            +QDRDWYWRAFLP GADR HPAC+PFGPNAASL+G+KFPKSLVVVAGLDL  D Q  YA+
Sbjct: 241  LQDRDWYWRAFLPEGADRTHPACDPFGPNAASLEGVKFPKSLVVVAGLDLIHDRQLAYAQ 300

Query: 2450 GLMKAGHDVNLIHLEQATIGFYLLPNNNHFYSVMEEINSFVSC 2578
            GL KAG D+ L+ LEQATIGFYLLPNNNHF+ +M+EIN+FVSC
Sbjct: 301  GLKKAGQDIKLMFLEQATIGFYLLPNNNHFFCLMDEINNFVSC 343


>gb|ACN86359.1| GID1-4 [Gossypium hirsutum]
          Length = 344

 Score =  586 bits (1511), Expect = e-164
 Identities = 278/341 (81%), Positives = 309/341 (90%)
 Frame = +2

Query: 1553 MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNILRRPDGTFNRHLAEFLDRKVPANANPV 1732
            MAGSNEVNLNE KMVVPLNTWVLIS+FKLAYN+LRRPDGTFNRHLAEFLDRKVPAN NPV
Sbjct: 1    MAGSNEVNLNECKMVVPLNTWVLISSFKLAYNLLRRPDGTFNRHLAEFLDRKVPANLNPV 60

Query: 1733 DGVFSFDVIIDRATSLLCRIYRMAPEDEVQPSIIELEGPLSNEVVPVIIFFHGGSFAHSS 1912
            DGVFSFDV+IDRAT LLCRIYR A  +E +P+I+ELE P+  +VVPVIIFFHGGSFAHSS
Sbjct: 61   DGVFSFDVLIDRATGLLCRIYRPATAEEPEPNIVELEKPVVGDVVPVIIFFHGGSFAHSS 120

Query: 1913 ANSAIYDTLSRRLVGNCKAVVVSVNYRRAPENQFPCAYEDGWAALKWVHSRSWLRSGKDS 2092
            A+SAIYDTL RRLVG CKAVVVSVNYRRAPEN++PCAY+DGW A KWV+SRSWL+S KDS
Sbjct: 121  ADSAIYDTLCRRLVGICKAVVVSVNYRRAPENRYPCAYDDGWTAFKWVNSRSWLQSRKDS 180

Query: 2093 KAHVYLAGDSSGGNIAHHVAMRAAESGTEVLGNILLNPMFGGMERTESEKRLDGKYFVTI 2272
            K H+YLAGDSSGGNIAHHVA RA ESG +VLGNILLNPMFGG ERTESEKRLDGKYFVT+
Sbjct: 181  KVHIYLAGDSSGGNIAHHVAARAVESGIDVLGNILLNPMFGGQERTESEKRLDGKYFVTL 240

Query: 2273 QDRDWYWRAFLPAGADRNHPACNPFGPNAASLQGIKFPKSLVVVAGLDLSQDWQKGYAKG 2452
            +DRDWYWRAFLP G +R+HPACNPFGPN  SL+GIKFPKSLVVVAGLDL QDWQ  Y +G
Sbjct: 241  RDRDWYWRAFLPEGENRDHPACNPFGPNGRSLEGIKFPKSLVVVAGLDLIQDWQLAYVEG 300

Query: 2453 LMKAGHDVNLIHLEQATIGFYLLPNNNHFYSVMEEINSFVS 2575
            L KAG +V L+++EQATIGFYLLPNNNHF++VM+EI+ FVS
Sbjct: 301  LRKAGKEVKLLYMEQATIGFYLLPNNNHFHTVMDEISEFVS 341


>ref|XP_002319576.1| predicted protein [Populus trichocarpa] gi|222857952|gb|EEE95499.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  585 bits (1509), Expect = e-164
 Identities = 282/341 (82%), Positives = 306/341 (89%)
 Frame = +2

Query: 1553 MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNILRRPDGTFNRHLAEFLDRKVPANANPV 1732
            MAGSNEVNLNESKMVVPLNTWVLISNFKLAYN+LRRPDGTFNRHLAEFLDRKVPANAN V
Sbjct: 1    MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANAV 60

Query: 1733 DGVFSFDVIIDRATSLLCRIYRMAPEDEVQPSIIELEGPLSNEVVPVIIFFHGGSFAHSS 1912
            DGVFSFDVIIDR TSLL RIYR A     QP+I++LE P + +VVPVIIFFHGGSFAHSS
Sbjct: 61   DGVFSFDVIIDRGTSLLSRIYRQADAQVSQPNIVDLEKPNNLDVVPVIIFFHGGSFAHSS 120

Query: 1913 ANSAIYDTLSRRLVGNCKAVVVSVNYRRAPENQFPCAYEDGWAALKWVHSRSWLRSGKDS 2092
            ANSAIYDTL RRLVG CKAVVVSVNYRRAPEN++PCAY+DGW ALKWV+SR+WL+S KDS
Sbjct: 121  ANSAIYDTLCRRLVGLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRAWLQSKKDS 180

Query: 2093 KAHVYLAGDSSGGNIAHHVAMRAAESGTEVLGNILLNPMFGGMERTESEKRLDGKYFVTI 2272
            K H+YLAGDSSGGNI HHVA RA ESG EVLGN+LLNPMFGG ERTESEKRLDGKYFVT+
Sbjct: 181  KVHIYLAGDSSGGNIVHHVASRAVESGIEVLGNMLLNPMFGGKERTESEKRLDGKYFVTL 240

Query: 2273 QDRDWYWRAFLPAGADRNHPACNPFGPNAASLQGIKFPKSLVVVAGLDLSQDWQKGYAKG 2452
            QDRDWYWRAFLP G DR+HPACNPFGP   SL+G+KFPKSLVVVAGLDL QDWQ  YA+G
Sbjct: 241  QDRDWYWRAFLPEGEDRDHPACNPFGPKGKSLEGMKFPKSLVVVAGLDLVQDWQLAYAEG 300

Query: 2453 LMKAGHDVNLIHLEQATIGFYLLPNNNHFYSVMEEINSFVS 2575
            L KAG DV L++LEQATIGFYLLPNNNHF++VM EI+ FVS
Sbjct: 301  LKKAGQDVKLLYLEQATIGFYLLPNNNHFHTVMNEISEFVS 341


>ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus communis]
            gi|223548271|gb|EEF49762.1| Gibberellin receptor GID1,
            putative [Ricinus communis]
          Length = 344

 Score =  583 bits (1502), Expect = e-163
 Identities = 277/340 (81%), Positives = 308/340 (90%)
 Frame = +2

Query: 1553 MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNILRRPDGTFNRHLAEFLDRKVPANANPV 1732
            MAGSNEVNLNESKMVVPLNTWVLISNFKLAYN+LRRPDGTFNRHLAEFLDRKVP NANPV
Sbjct: 1    MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPPNANPV 60

Query: 1733 DGVFSFDVIIDRATSLLCRIYRMAPEDEVQPSIIELEGPLSNEVVPVIIFFHGGSFAHSS 1912
            DGVFSFDV+IDR TSLL RIYR A  +++QP+I ELE P++++VVPVI+FFHGGSFAHSS
Sbjct: 61   DGVFSFDVVIDRGTSLLSRIYRPAEGEQLQPNIAELEKPVTSDVVPVILFFHGGSFAHSS 120

Query: 1913 ANSAIYDTLSRRLVGNCKAVVVSVNYRRAPENQFPCAYEDGWAALKWVHSRSWLRSGKDS 2092
            ANSAIYDTL RRLVG C+AVVVSVNYRRAPEN++PCAY+DGW ALKWV+SR+WL S KD+
Sbjct: 121  ANSAIYDTLCRRLVGICRAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRTWLESKKDA 180

Query: 2093 KAHVYLAGDSSGGNIAHHVAMRAAESGTEVLGNILLNPMFGGMERTESEKRLDGKYFVTI 2272
            K H+YLAGDSSGGNI HHVA+RA ESG EVLGNILLNPMFGG ERTESEKRLDGKYFVT+
Sbjct: 181  KVHMYLAGDSSGGNIVHHVALRALESGIEVLGNILLNPMFGGQERTESEKRLDGKYFVTV 240

Query: 2273 QDRDWYWRAFLPAGADRNHPACNPFGPNAASLQGIKFPKSLVVVAGLDLSQDWQKGYAKG 2452
            QDRDWYWRAFLP  ADR+HPACNPFGP   SL+G+KFPKSLVVVAGLDL QDWQ  Y +G
Sbjct: 241  QDRDWYWRAFLPEEADRDHPACNPFGPKGRSLEGMKFPKSLVVVAGLDLIQDWQLAYVEG 300

Query: 2453 LMKAGHDVNLIHLEQATIGFYLLPNNNHFYSVMEEINSFV 2572
            L KAG  V L++LEQATIGFYLLPNNNHF++VM+EI+ FV
Sbjct: 301  LKKAGQVVKLLYLEQATIGFYLLPNNNHFHTVMDEISEFV 340


>ref|XP_002328407.1| predicted protein [Populus trichocarpa] gi|222838122|gb|EEE76487.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  578 bits (1491), Expect = e-162
 Identities = 279/341 (81%), Positives = 307/341 (90%)
 Frame = +2

Query: 1553 MAGSNEVNLNESKMVVPLNTWVLISNFKLAYNILRRPDGTFNRHLAEFLDRKVPANANPV 1732
            MAGSN VNLNESK VVPLNTWVLISNFKLAYN+LRRPDGTFNRHLAEFLDRKVPANANPV
Sbjct: 1    MAGSNGVNLNESKRVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPV 60

Query: 1733 DGVFSFDVIIDRATSLLCRIYRMAPEDEVQPSIIELEGPLSNEVVPVIIFFHGGSFAHSS 1912
            DGVFSFDVIIDR TSLL RIYR A   E QP+I++LE P+++EVVPVIIFFHGGSFAHSS
Sbjct: 61   DGVFSFDVIIDRGTSLLSRIYRRADAQESQPNIVDLEKPVNSEVVPVIIFFHGGSFAHSS 120

Query: 1913 ANSAIYDTLSRRLVGNCKAVVVSVNYRRAPENQFPCAYEDGWAALKWVHSRSWLRSGKDS 2092
            +NSAIYDTL RRLVG CKAVVVSVNYRRAPEN++PCAY+DGW ALKWV+SR+WL+S KDS
Sbjct: 121  SNSAIYDTLCRRLVGLCKAVVVSVNYRRAPENRYPCAYDDGWTALKWVNSRTWLQSKKDS 180

Query: 2093 KAHVYLAGDSSGGNIAHHVAMRAAESGTEVLGNILLNPMFGGMERTESEKRLDGKYFVTI 2272
            K H+YLAGDSSGGNI HHVA+RA ESG +VLGNILLNPMFGG ERTESEKRLDGKYFVT+
Sbjct: 181  KVHIYLAGDSSGGNIVHHVALRAVESGIDVLGNILLNPMFGGQERTESEKRLDGKYFVTL 240

Query: 2273 QDRDWYWRAFLPAGADRNHPACNPFGPNAASLQGIKFPKSLVVVAGLDLSQDWQKGYAKG 2452
            QDRDWYWRAFLP   DR+HPACNPFGP   SL+GIKFPKSLVVVAGLDL  D Q  YA+G
Sbjct: 241  QDRDWYWRAFLPEREDRDHPACNPFGPKGKSLEGIKFPKSLVVVAGLDLVHDRQITYAEG 300

Query: 2453 LMKAGHDVNLIHLEQATIGFYLLPNNNHFYSVMEEINSFVS 2575
            L KAG DV L++LEQATIGFYLLPNNN+F++VM+EI+ FVS
Sbjct: 301  LKKAGQDVKLLYLEQATIGFYLLPNNNYFHTVMDEISEFVS 341


Top