BLASTX nr result

ID: Coptis25_contig00006688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006688
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283542.1| PREDICTED: uncharacterized protein LOC100248...    84   9e-15
emb|CAN78695.1| hypothetical protein VITISV_037476 [Vitis vinifera]    84   9e-15
ref|XP_003566313.1| PREDICTED: uncharacterized protein LOC100845...    74   2e-11
ref|XP_002440994.1| hypothetical protein SORBIDRAFT_09g018620 [S...    74   2e-11
gb|EEC72129.1| hypothetical protein OsI_05125 [Oryza sativa Indi...    73   2e-11

>ref|XP_002283542.1| PREDICTED: uncharacterized protein LOC100248215 [Vitis vinifera]
           gi|297741707|emb|CBI32839.3| unnamed protein product
           [Vitis vinifera]
          Length = 529

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/56 (73%), Positives = 52/56 (92%)
 Frame = +2

Query: 2   AAVLLAIGNRSPPLPRLKQLARTITGPHAKNLGLNHTIFGRVKQVRLSSAMQHSLN 169
           ++VLLA+GN +P LPRLKQLA+TITG H++NLGLN+T+FGRVKQVRLSS +QHSL+
Sbjct: 258 SSVLLAVGN-TPSLPRLKQLAQTITGSHSRNLGLNNTVFGRVKQVRLSSILQHSLH 312


>emb|CAN78695.1| hypothetical protein VITISV_037476 [Vitis vinifera]
          Length = 514

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/56 (73%), Positives = 52/56 (92%)
 Frame = +2

Query: 2   AAVLLAIGNRSPPLPRLKQLARTITGPHAKNLGLNHTIFGRVKQVRLSSAMQHSLN 169
           ++VLLA+GN +P LPRLKQLA+TITG H++NLGLN+T+FGRVKQVRLSS +QHSL+
Sbjct: 243 SSVLLAVGN-TPSLPRLKQLAQTITGSHSRNLGLNNTVFGRVKQVRLSSILQHSLH 297


>ref|XP_003566313.1| PREDICTED: uncharacterized protein LOC100845784 [Brachypodium
           distachyon]
          Length = 507

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/55 (60%), Positives = 44/55 (80%)
 Frame = +2

Query: 5   AVLLAIGNRSPPLPRLKQLARTITGPHAKNLGLNHTIFGRVKQVRLSSAMQHSLN 169
           +++L +GN  P LPR+KQLA+TIT   + NLGLNHT+FGRVKQ+ LSS + HSL+
Sbjct: 265 SIILEVGNHQPSLPRMKQLAQTITNSSSGNLGLNHTVFGRVKQISLSSYLCHSLH 319


>ref|XP_002440994.1| hypothetical protein SORBIDRAFT_09g018620 [Sorghum bicolor]
           gi|241946279|gb|EES19424.1| hypothetical protein
           SORBIDRAFT_09g018620 [Sorghum bicolor]
          Length = 494

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/56 (58%), Positives = 44/56 (78%)
 Frame = +2

Query: 2   AAVLLAIGNRSPPLPRLKQLARTITGPHAKNLGLNHTIFGRVKQVRLSSAMQHSLN 169
           A+++L +GN  P LPR+KQLA+TI    + NLGLNHT+FGRVKQ+ LSS + HSL+
Sbjct: 268 ASIVLEVGNHQPSLPRMKQLAQTIANSSSGNLGLNHTVFGRVKQISLSSYLTHSLH 323


>gb|EEC72129.1| hypothetical protein OsI_05125 [Oryza sativa Indica Group]
          Length = 513

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/55 (58%), Positives = 44/55 (80%)
 Frame = +2

Query: 5   AVLLAIGNRSPPLPRLKQLARTITGPHAKNLGLNHTIFGRVKQVRLSSAMQHSLN 169
           ++ L +GN  P +PR+KQLA+TIT   + NLGLNHT+FGRVKQ+ LSS ++HSL+
Sbjct: 281 SIFLEVGNHQPSVPRMKQLAQTITNSSSGNLGLNHTVFGRVKQISLSSYLRHSLH 335


Top