BLASTX nr result

ID: Coptis25_contig00006684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006684
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242143.1| uncharacterized protein LOC100781634 [Glycin...   216   4e-54
ref|XP_004148735.1| PREDICTED: mitochondrial carnitine/acylcarni...   208   8e-52
ref|XP_003534268.1| PREDICTED: mitochondrial carnitine/acylcarni...   207   1e-51
ref|XP_003612918.1| Mitochondrial carnitine/acylcarnitine carrie...   207   2e-51
gb|AFK47489.1| unknown [Medicago truncatula]                          206   4e-51

>ref|NP_001242143.1| uncharacterized protein LOC100781634 [Glycine max]
           gi|255639564|gb|ACU20076.1| unknown [Glycine max]
          Length = 297

 Score =  216 bits (549), Expect = 4e-54
 Identities = 106/119 (89%), Positives = 114/119 (95%)
 Frame = +1

Query: 304 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPVPLPGQLPKFSGALDAVKQTIAAE 483
           MGDVAKDLTAGT+GGAAQLIVGHPFDTIKVKLQSQP PLPGQLPK+SGA+DAVKQT+AAE
Sbjct: 1   MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKQTVAAE 60

Query: 484 GLGGLYKGMGAPLATVAAFNAVLFTVRGQLESLLKSDPGARLTINQQIACGAGAGVAVS 660
           G GGLYKGMGAPLATVAAFNAVLFTVRGQ+E+LL+S PGA LTINQQ+ CGAGAGVAVS
Sbjct: 61  GPGGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSHPGATLTINQQVVCGAGAGVAVS 119


>ref|XP_004148735.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 1 [Cucumis sativus]
           gi|449462013|ref|XP_004148736.1| PREDICTED:
           mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 2 [Cucumis sativus]
           gi|449523403|ref|XP_004168713.1| PREDICTED:
           mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 1 [Cucumis sativus]
           gi|449523405|ref|XP_004168714.1| PREDICTED:
           mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 2 [Cucumis sativus]
          Length = 297

 Score =  208 bits (529), Expect = 8e-52
 Identities = 102/119 (85%), Positives = 112/119 (94%)
 Frame = +1

Query: 304 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPVPLPGQLPKFSGALDAVKQTIAAE 483
           MGDVAKDLTAGT+GGAAQLI GHPFDTIKVKLQSQPVPLPGQLPKFSGA+DAVKQT+AAE
Sbjct: 1   MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKFSGAMDAVKQTLAAE 60

Query: 484 GLGGLYKGMGAPLATVAAFNAVLFTVRGQLESLLKSDPGARLTINQQIACGAGAGVAVS 660
           G  GLYKGMGAPLATVAAFNAVLF+VRGQ+E+LL+S PG  LT+NQQ+ CGAGAG+AVS
Sbjct: 61  GPRGLYKGMGAPLATVAAFNAVLFSVRGQMETLLRSQPGVPLTVNQQVICGAGAGLAVS 119


>ref|XP_003534268.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 1 [Glycine max]
           gi|356531407|ref|XP_003534269.1| PREDICTED:
           mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 2 [Glycine max]
           gi|356531409|ref|XP_003534270.1| PREDICTED:
           mitochondrial carnitine/acylcarnitine carrier-like
           protein-like isoform 3 [Glycine max]
          Length = 297

 Score =  207 bits (527), Expect = 1e-51
 Identities = 102/119 (85%), Positives = 110/119 (92%)
 Frame = +1

Query: 304 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPVPLPGQLPKFSGALDAVKQTIAAE 483
           MGDVAKDLTAGT+GGAAQLIVGHPFDTIKVKLQSQP PLPGQ P++SGA+DAVKQT+AAE
Sbjct: 1   MGDVAKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQFPRYSGAIDAVKQTVAAE 60

Query: 484 GLGGLYKGMGAPLATVAAFNAVLFTVRGQLESLLKSDPGARLTINQQIACGAGAGVAVS 660
           G  GLYKGMGAPLATVAAFNA LFTVRGQ+E+LL S PGA LTINQQ+ CGAGAGVAVS
Sbjct: 61  GPRGLYKGMGAPLATVAAFNAALFTVRGQMEALLMSHPGATLTINQQVVCGAGAGVAVS 119


>ref|XP_003612918.1| Mitochondrial carnitine/acylcarnitine carrier-like protein
           [Medicago truncatula] gi|355514253|gb|AES95876.1|
           Mitochondrial carnitine/acylcarnitine carrier-like
           protein [Medicago truncatula]
          Length = 297

 Score =  207 bits (526), Expect = 2e-51
 Identities = 103/119 (86%), Positives = 112/119 (94%)
 Frame = +1

Query: 304 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPVPLPGQLPKFSGALDAVKQTIAAE 483
           MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQP PLPGQ+PK+SGA+DAVK+TIAAE
Sbjct: 1   MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAE 60

Query: 484 GLGGLYKGMGAPLATVAAFNAVLFTVRGQLESLLKSDPGARLTINQQIACGAGAGVAVS 660
           G GGLYKGMGAPLATVAAFNAVLFTVRGQ+E+LLKS PG  LTINQQ+ CGA AG++VS
Sbjct: 61  GPGGLYKGMGAPLATVAAFNAVLFTVRGQMEALLKSHPGDVLTINQQLVCGAAAGLSVS 119


>gb|AFK47489.1| unknown [Medicago truncatula]
          Length = 297

 Score =  206 bits (523), Expect = 4e-51
 Identities = 101/119 (84%), Positives = 110/119 (92%)
 Frame = +1

Query: 304 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPVPLPGQLPKFSGALDAVKQTIAAE 483
           MGDVAKDL AGT+GGAAQLIVGHPFDTIKVKLQSQP PLPGQ P++SGA DAV+QT+AAE
Sbjct: 1   MGDVAKDLAAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPRYSGAFDAVRQTLAAE 60

Query: 484 GLGGLYKGMGAPLATVAAFNAVLFTVRGQLESLLKSDPGARLTINQQIACGAGAGVAVS 660
           G GGLYKGMGAPLATVAAFNAVLFTVRGQ+ESL++S PGA LT+NQQ  CGAGAGVAVS
Sbjct: 61  GPGGLYKGMGAPLATVAAFNAVLFTVRGQMESLVRSHPGAPLTVNQQFVCGAGAGVAVS 119


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