BLASTX nr result

ID: Coptis25_contig00006682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006682
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38973.1| unknown [Lotus japonicus]                              132   8e-29
ref|XP_002309071.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002269159.1| PREDICTED: uncharacterized protein LOC100249...   128   2e-27
ref|NP_001237980.1| uncharacterized protein LOC100306383 [Glycin...   125   8e-27
ref|XP_004173015.1| PREDICTED: uncharacterized protein LOC101228...   125   1e-26

>gb|AFK38973.1| unknown [Lotus japonicus]
          Length = 128

 Score =  132 bits (332), Expect = 8e-29
 Identities = 67/97 (69%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
 Frame = +1

Query: 178 CCQTQKNR-RSLKVVSAVGDVSAEGTNYLIXXXXXXXXXXTAFPIVFSRKDVCPECDGAG 354
           C + QKN+ R+L VVSAVGDVSA+G  YLI          TAFPI+FSRKD CPECDGAG
Sbjct: 32  CSRIQKNKNRTLTVVSAVGDVSADGNTYLIAGAIAVALVGTAFPILFSRKDTCPECDGAG 91

Query: 355 FVRQSSKILQANAARKDLNQIVCARCNGLGKLGQIDK 465
           FVR+S K L+ANAARKD  QIVCA CNGLGKL QIDK
Sbjct: 92  FVRKSGKTLRANAARKDQTQIVCANCNGLGKLNQIDK 128


>ref|XP_002309071.1| predicted protein [Populus trichocarpa] gi|222855047|gb|EEE92594.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  130 bits (328), Expect = 2e-28
 Identities = 64/91 (70%), Positives = 72/91 (79%)
 Frame = +1

Query: 193 KNRRSLKVVSAVGDVSAEGTNYLIXXXXXXXXXXTAFPIVFSRKDVCPECDGAGFVRQSS 372
           KN+RSL VV+AVGDVSA+GT YLI          TAFPI+FSRKD+CPECDGAGF+R+S 
Sbjct: 47  KNKRSLTVVAAVGDVSADGTTYLIAGAAAVALLGTAFPILFSRKDLCPECDGAGFIRKSG 106

Query: 373 KILQANAARKDLNQIVCARCNGLGKLGQIDK 465
             L+ANAARKD  QIVC RCNGLGKL QIDK
Sbjct: 107 ATLRANAARKDQAQIVCPRCNGLGKLNQIDK 137


>ref|XP_002269159.1| PREDICTED: uncharacterized protein LOC100249439 [Vitis vinifera]
           gi|147861902|emb|CAN82963.1| hypothetical protein
           VITISV_000344 [Vitis vinifera]
           gi|297740343|emb|CBI30525.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  128 bits (321), Expect = 2e-27
 Identities = 68/106 (64%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
 Frame = +1

Query: 154 FNTRVVPV--CCQTQKNRRSLKVVSAVGDVSAEGTNYLIXXXXXXXXXXTAFPIVFSRKD 327
           F  R  PV      +K  RSL VV+AVG+VS +GT YLI          TAFPI FSRKD
Sbjct: 24  FYARPTPVGSAVSWKKKNRSLTVVAAVGEVSTDGTIYLIAGAVAVTVLGTAFPIFFSRKD 83

Query: 328 VCPECDGAGFVRQSSKILQANAARKDLNQIVCARCNGLGKLGQIDK 465
           VCPECDGAGFVRQS   L+ANAARKD  QIVCARCNGLGKL Q+DK
Sbjct: 84  VCPECDGAGFVRQSGVALRANAARKDQAQIVCARCNGLGKLNQVDK 129


>ref|NP_001237980.1| uncharacterized protein LOC100306383 [Glycine max]
           gi|255628365|gb|ACU14527.1| unknown [Glycine max]
          Length = 139

 Score =  125 bits (315), Expect = 8e-27
 Identities = 62/94 (65%), Positives = 70/94 (74%)
 Frame = +1

Query: 184 QTQKNRRSLKVVSAVGDVSAEGTNYLIXXXXXXXXXXTAFPIVFSRKDVCPECDGAGFVR 363
           Q  +NR S  VV+AVGDVS++GT YL+          TAFPI FSRKD CPECDGAGFVR
Sbjct: 46  QRNRNRSSSIVVAAVGDVSSDGTTYLVAGAIAVALIGTAFPIFFSRKDTCPECDGAGFVR 105

Query: 364 QSSKILQANAARKDLNQIVCARCNGLGKLGQIDK 465
           ++   L+ANAARKD  QIVCARCNGLGKL QIDK
Sbjct: 106 KADVTLRANAARKDQTQIVCARCNGLGKLNQIDK 139


>ref|XP_004173015.1| PREDICTED: uncharacterized protein LOC101228756 [Cucumis sativus]
          Length = 135

 Score =  125 bits (313), Expect = 1e-26
 Identities = 60/93 (64%), Positives = 72/93 (77%)
 Frame = +1

Query: 187 TQKNRRSLKVVSAVGDVSAEGTNYLIXXXXXXXXXXTAFPIVFSRKDVCPECDGAGFVRQ 366
           ++ ++R   VV+AVGDVS++GT YLI          TAFPI+FSRKD+CPECDGAGFVR+
Sbjct: 43  SRNHKRISTVVAAVGDVSSDGTTYLIAGAIAVALVGTAFPILFSRKDLCPECDGAGFVRR 102

Query: 367 SSKILQANAARKDLNQIVCARCNGLGKLGQIDK 465
           S   L+ANAARKD  QIVCARCNGLGKL Q+DK
Sbjct: 103 SESALRANAARKDQTQIVCARCNGLGKLNQVDK 135


Top