BLASTX nr result

ID: Coptis25_contig00006676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006676
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280437.2| PREDICTED: uncharacterized protein LOC100258...    60   4e-07
emb|CBI15097.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_004152454.1| PREDICTED: uncharacterized protein LOC101218...    59   8e-07

>ref|XP_002280437.2| PREDICTED: uncharacterized protein LOC100258813 [Vitis vinifera]
          Length = 332

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = -1

Query: 750 HDEAMFGELVAQPSMSTDEEVAIEDDRTDNAIDQKATKENGVGTNHISDKVLAKQQGSWR 571
           HDEA+FG     PS  +D E  +E+D        K + E+ +GT+ IS+KVLAKQQGSWR
Sbjct: 274 HDEAIFGGSTIPPSNFSDNEPEVENDT-------KESNESSLGTSLISEKVLAKQQGSWR 326

Query: 570 D*ARKL 553
           D AR++
Sbjct: 327 DRARRV 332


>emb|CBI15097.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = -1

Query: 750 HDEAMFGELVAQPSMSTDEEVAIEDDRTDNAIDQKATKENGVGTNHISDKVLAKQQGSWR 571
           HDEA+FG     PS  +D E  +E+D        K + E+ +GT+ IS+KVLAKQQGSWR
Sbjct: 216 HDEAIFGGSTIPPSNFSDNEPEVENDT-------KESNESSLGTSLISEKVLAKQQGSWR 268

Query: 570 D*ARKL 553
           D AR++
Sbjct: 269 DRARRV 274


>ref|XP_004152454.1| PREDICTED: uncharacterized protein LOC101218261 [Cucumis sativus]
           gi|449487790|ref|XP_004157802.1| PREDICTED:
           uncharacterized LOC101218261 [Cucumis sativus]
          Length = 366

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -1

Query: 750 HDEAMFGELVAQPSMSTDEE--VAIEDDRTDNAIDQKATKENGVGTNHISDKVLAKQQGS 577
           HDEAMFG  V Q   +TD+E  V  E++R   + D      +G+ TN +S+K++AKQQGS
Sbjct: 305 HDEAMFGAPVRQLLSTTDDEDKVEAENERVKESCD------SGMATNLLSEKIIAKQQGS 358

Query: 576 WRD*ARK 556
           WRD ARK
Sbjct: 359 WRDRARK 365


Top