BLASTX nr result
ID: Coptis25_contig00006673
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006673
(758 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263238.1| PREDICTED: deoxyhypusine hydroxylase [Vitis ... 97 1e-23
gb|AFK41678.1| unknown [Medicago truncatula] 86 7e-19
ref|XP_002876460.1| hypothetical protein ARALYDRAFT_907292 [Arab... 79 1e-18
ref|XP_002521020.1| lyase, putative [Ricinus communis] gi|223539... 83 2e-18
ref|NP_567062.1| deoxyhypusine hydroxylase [Arabidopsis thaliana... 79 5e-18
>ref|XP_002263238.1| PREDICTED: deoxyhypusine hydroxylase [Vitis vinifera]
gi|297744120|emb|CBI37090.3| unnamed protein product
[Vitis vinifera]
Length = 315
Score = 96.7 bits (239), Expect(2) = 1e-23
Identities = 49/66 (74%), Positives = 54/66 (81%)
Frame = -3
Query: 231 PAQEVRETCELALERI*QQKNICQNEDSTKEVASPFLSVDPAAPASCCSSVDQLREVLLD 52
PAQEVRETCELAL RI + KN+ N+ + ASPFLSVDPAAPAS CSSVDQLREVLLD
Sbjct: 123 PAQEVRETCELALRRIEEVKNVVGNDGMSMVEASPFLSVDPAAPASSCSSVDQLREVLLD 182
Query: 51 EERDMY 34
EE+ MY
Sbjct: 183 EEKGMY 188
Score = 39.3 bits (90), Expect(2) = 1e-23
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = -2
Query: 445 KSLILMARQRSNFVVSIFQFPSNKN------PPLATGWDLLSKCHFRAIVECCLSEALGA 284
++LIL R SN + F + P L +L+ IV +EALGA
Sbjct: 49 QALILATRDSSNLLAHEAAFALGQMQDVDAVPALEA---VLNDFSLHPIVRHEAAEALGA 105
Query: 283 IGLEGNIPLLEKTLVSDP 230
IGLE N+PLL+ +LV DP
Sbjct: 106 IGLESNVPLLKNSLVVDP 123
>gb|AFK41678.1| unknown [Medicago truncatula]
Length = 317
Score = 86.3 bits (212), Expect(2) = 7e-19
Identities = 46/77 (59%), Positives = 55/77 (71%)
Frame = -3
Query: 231 PAQEVRETCELALERI*QQKNICQNEDSTKEVASPFLSVDPAAPASCCSSVDQLREVLLD 52
PAQEVRE C+LAL+RI K+ +DST SPF SVDPAAPAS CSSV QLR++LLD
Sbjct: 125 PAQEVREACQLALQRILNLKHAAATDDSTAPGISPFKSVDPAAPASSCSSVSQLRDLLLD 184
Query: 51 EERDMYLDMRLSLLFKI 1
EE+ MY R + LF +
Sbjct: 185 EEKGMY--ERYAALFSL 199
Score = 33.9 bits (76), Expect(2) = 7e-19
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = -2
Query: 442 SLILMARQRSNFVV-----SIFQFPSNKNPPLATGWDLLSKCHFRAIVECCLSEALGAIG 278
+LIL R SN + ++ Q + P T +L+ IV +EALGAIG
Sbjct: 52 ALILATRDSSNLLAHEAAFALGQMQELEAIPALTS--VLNDLSLHPIVRHEAAEALGAIG 109
Query: 277 LEGNIPLLEKTLVSDP 230
+ N+ LL+ +L SDP
Sbjct: 110 SDSNVSLLKHSLDSDP 125
>ref|XP_002876460.1| hypothetical protein ARALYDRAFT_907292 [Arabidopsis lyrata subsp.
lyrata] gi|297322298|gb|EFH52719.1| hypothetical protein
ARALYDRAFT_907292 [Arabidopsis lyrata subsp. lyrata]
Length = 314
Score = 79.0 bits (193), Expect(2) = 1e-18
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = -3
Query: 231 PAQEVRETCELALERI*QQKNI-CQNEDSTKEVASPFLSVDPAAPASCCSSVDQLREVLL 55
PAQEVRETCELAL+RI + N+ +N+ ST E SPF+SVDPA PA+ SSV QLR++LL
Sbjct: 122 PAQEVRETCELALKRIEELSNVDAENQSSTAE-KSPFMSVDPAGPAASFSSVHQLRQILL 180
Query: 54 DEERDMY 34
DE + MY
Sbjct: 181 DETKGMY 187
Score = 40.0 bits (92), Expect(2) = 1e-18
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -2
Query: 442 SLILMARQRSNFVVSIFQFPSNKN------PPLATGWDLLSKCHFRAIVECCLSEALGAI 281
+LIL +R SN + F + P L + +L+ IV L+EALGAI
Sbjct: 49 ALILASRDSSNLLAHEAAFALGQMQDAEAIPALES---VLNDMSLHPIVRHELTEALGAI 105
Query: 280 GLEGNIPLLEKTLVSDP 230
GL GN+ +L+K+L SDP
Sbjct: 106 GLAGNVDILKKSLSSDP 122
>ref|XP_002521020.1| lyase, putative [Ricinus communis] gi|223539857|gb|EEF41437.1|
lyase, putative [Ricinus communis]
Length = 303
Score = 83.2 bits (204), Expect(2) = 2e-18
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = -3
Query: 231 PAQEVRETCELALERI*QQKNICQNEDSTKEVASPFLSVDPAAPASCCSSVDQLREVLLD 52
PAQEVRETCELAL+RI + E ++ SPFLSVDPA PASCC SVD+LRE LLD
Sbjct: 110 PAQEVRETCELALKRIEEMGTANNCESTSGSERSPFLSVDPAVPASCCCSVDKLREALLD 169
Query: 51 EERDMY 34
E + MY
Sbjct: 170 EGKGMY 175
Score = 35.0 bits (79), Expect(2) = 2e-18
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -2
Query: 346 LLSKCHFRAIVECCLSEALGAIGLEGNIPLLEKTLVSDP 230
+L+ IV +EALGAIGL N+PLL+ +L DP
Sbjct: 72 ILNDLSLHPIVRHEAAEALGAIGLLSNVPLLKNSLAVDP 110
>ref|NP_567062.1| deoxyhypusine hydroxylase [Arabidopsis thaliana]
gi|75250258|sp|Q94JW0.1|DOHH_ARATH RecName:
Full=Deoxyhypusine hydroxylase; Short=DOHH; AltName:
Full=Deoxyhypusine dioxygenase; AltName:
Full=Deoxyhypusine monooxygenase
gi|13926240|gb|AAK49594.1|AF372878_1 AT3g58180/F9D24_90
[Arabidopsis thaliana] gi|22655416|gb|AAM98300.1|
At3g58180/F9D24_90 [Arabidopsis thaliana]
gi|222423905|dbj|BAH19916.1| AT3G58180 [Arabidopsis
thaliana] gi|332646230|gb|AEE79751.1| deoxyhypusine
hydroxylase [Arabidopsis thaliana]
Length = 314
Score = 79.3 bits (194), Expect(2) = 5e-18
Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Frame = -3
Query: 231 PAQEVRETCELALERI*QQKNI-CQNEDSTKEVASPFLSVDPAAPASCCSSVDQLREVLL 55
PAQEVRETCELAL+RI N+ +N+ ST E SPF+SVDPA PA+ SSV QLR+VLL
Sbjct: 122 PAQEVRETCELALKRIEDMSNVDAENQSSTTE-KSPFMSVDPAGPAASFSSVHQLRQVLL 180
Query: 54 DEERDMY 34
DE + MY
Sbjct: 181 DETKGMY 187
Score = 37.7 bits (86), Expect(2) = 5e-18
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 442 SLILMARQRSNFVVSIFQFPSNKN------PPLATGWDLLSKCHFRAIVECCLSEALGAI 281
+LIL +R SN + F + P L + +L+ IV +EALGAI
Sbjct: 49 ALILASRDSSNLLAHEAAFALGQMQDAEAIPALES---VLNDMSLHPIVRHEAAEALGAI 105
Query: 280 GLEGNIPLLEKTLVSDP 230
GL GN+ +L+K+L SDP
Sbjct: 106 GLAGNVNILKKSLSSDP 122