BLASTX nr result

ID: Coptis25_contig00006668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006668
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135329.1| PREDICTED: ranBP2-type zinc finger protein A...   380   e-103
ref|XP_002514906.1| protein with unknown function [Ricinus commu...   379   e-103
ref|XP_003551204.1| PREDICTED: ranBP2-type zinc finger protein A...   377   e-102
ref|XP_003538545.1| PREDICTED: ranBP2-type zinc finger protein A...   374   e-101
emb|CBI27663.3| unnamed protein product [Vitis vinifera]              372   e-100

>ref|XP_004135329.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Cucumis
            sativus] gi|449494955|ref|XP_004159694.1| PREDICTED:
            ranBP2-type zinc finger protein At1g67325-like [Cucumis
            sativus]
          Length = 285

 Score =  380 bits (975), Expect = e-103
 Identities = 186/287 (64%), Positives = 206/287 (71%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1379 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1200
            MSQ+D+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1199 AKSPHAPHXXXXXXXXXXXAVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1020
            AK   AP              PSSMY   PPYGSS+FNG+S+PPY++ FSGGS Y Y+YG
Sbjct: 61   AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 1019 NRLSAGSPYGPLHLS-----AXXXXXXXXXXXXXXXXMDRYXXXXXXXXXXXXXARQGVY 855
            +R SAGSPY PLHLS     +                MDRY              R G +
Sbjct: 121  SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGP-RPGFF 179

Query: 854  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 675
            P+E   KK ADT RD+DW CP CGN+NFSFRTVCNMRKCNTPKPGSQ SK +KSSK K P
Sbjct: 180  PDEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTP 239

Query: 674  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 534
            EGSWKC KCNNIN+PFRTKCNRQNCGADKP+ES +SP + A  E+DQ
Sbjct: 240  EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSP-SPAQEENDQ 285


>ref|XP_002514906.1| protein with unknown function [Ricinus communis]
            gi|223545957|gb|EEF47460.1| protein with unknown function
            [Ricinus communis]
          Length = 286

 Score =  379 bits (974), Expect = e-103
 Identities = 182/287 (63%), Positives = 207/287 (72%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1379 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1200
            MSQ+D+RNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1199 AKSPHAPHXXXXXXXXXXXAVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1020
            AK    P              PSSMY+  PPYGSSLFN +S+PPY++ FSG S Y Y+YG
Sbjct: 61   AKPMQPPQNYSSAAPYVGSGPPSSMYMGVPPYGSSLFNASSIPPYDVPFSGASAYHYNYG 120

Query: 1019 NRLSAGSPYGPLHLS-----AXXXXXXXXXXXXXXXXMDRYXXXXXXXXXXXXXARQGVY 855
            +RLSAGSPY PLH+S     +                MDRY              R G +
Sbjct: 121  SRLSAGSPYRPLHMSGPPPYSGGSMMGNGGMYGMPPLMDRYGLAMPMGGPPAMGPRPGFF 180

Query: 854  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 675
            P++   KK AD  RD+DWTCP CGN+NFSFRTVCNMRKCNTPKPGSQ +K+EK+SK KMP
Sbjct: 181  PDDKSLKKGADAARDNDWTCPKCGNINFSFRTVCNMRKCNTPKPGSQAAKSEKTSKQKMP 240

Query: 674  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 534
            EGSWKC KCNNIN+PFRTKCNRQNCGA+KP ES +SP + A+ E+DQ
Sbjct: 241  EGSWKCEKCNNINYPFRTKCNRQNCGAEKPDESKKSP-SPATDENDQ 286


>ref|XP_003551204.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Glycine
            max]
          Length = 285

 Score =  377 bits (967), Expect = e-102
 Identities = 182/287 (63%), Positives = 206/287 (71%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1379 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1200
            MS++DNRNSSA KRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSRVDNRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1199 AKSPHAPHXXXXXXXXXXXAVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1020
            AK   AP              PSS+YL  PPYGSSLFNG+S+PPY++ FSGGS Y Y+YG
Sbjct: 61   AKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSVPPYDVPFSGGSAYHYNYG 120

Query: 1019 NRLSAGSPYGPLHLSAXXXXXXXXXXXXXXXXM-----DRYXXXXXXXXXXXXXARQGVY 855
            +RLSAGSPY PLHLS                       DRY              R G +
Sbjct: 121  SRLSAGSPYRPLHLSGPTPYTGGPVMGNGGIYGMPQLLDRYGLGVPIGPGTMGA-RPGFF 179

Query: 854  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 675
             ++   KK  D  RD+DWTCP CGNVNFSFRT+CNMRKCNTPKPGSQ SK++K+SK KMP
Sbjct: 180  HDDKSQKKGTDATRDNDWTCPKCGNVNFSFRTICNMRKCNTPKPGSQASKSDKNSKQKMP 239

Query: 674  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 534
            EGSWKC KCNNIN+PFRTKCNRQNCGADKP+ES +SP + A+ ++DQ
Sbjct: 240  EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSP-SPAADQNDQ 285


>ref|XP_003538545.1| PREDICTED: ranBP2-type zinc finger protein At1g67325-like [Glycine
            max]
          Length = 283

 Score =  374 bits (960), Expect = e-101
 Identities = 183/285 (64%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
 Frame = -1

Query: 1379 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1200
            MS++DNRNSSA KRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSRVDNRNSSATKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1199 AKSPHAPHXXXXXXXXXXXAVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1020
            AK   AP              PSS+YL  PPYGSSLFNG+S+PPY++ FSGGS Y Y+YG
Sbjct: 61   AKPLQAPQGYSSSAPYLGSNTPSSIYLGVPPYGSSLFNGSSVPPYDVPFSGGSAYHYNYG 120

Query: 1019 NRLSAGSPYGPLHLSAXXXXXXXXXXXXXXXXM-----DRYXXXXXXXXXXXXXARQGVY 855
            +RLSAGSPY PLHLS                       DRY              R G +
Sbjct: 121  SRLSAGSPYRPLHLSGPTPYTGGPVIGNGGIYGMPQLLDRYGLGIPIGPGTMGA-RPGFF 179

Query: 854  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 675
             ++   KK  D  RD+DWTCP CGNVNFSFRTVCNMRKCNTPKPGSQ SK++K+SK KMP
Sbjct: 180  HDDKSQKK--DATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNSKQKMP 237

Query: 674  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGED 540
            EGSWKC KCNNIN+PFRTKCNRQNCGADKP+ES ESP + A   D
Sbjct: 238  EGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEESPSSAADQND 282


>emb|CBI27663.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  372 bits (954), Expect = e-100
 Identities = 186/287 (64%), Positives = 207/287 (72%), Gaps = 5/287 (1%)
 Frame = -1

Query: 1379 MSQIDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNSKSI 1200
            MSQ+DNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHNSKS 
Sbjct: 1    MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 1199 AKSPHAPHXXXXXXXXXXXAVPSSMYLTPPPYGSSLFNGASLPPYNLSFSGGSGYQYDYG 1020
            AK   AP              PSSMYL  PPYGSSLFNGA +PPY+  FSGGS Y Y+YG
Sbjct: 61   AKPVQAPQ-GYSSAPYVGSGAPSSMYLGVPPYGSSLFNGAPIPPYDGPFSGGSAYHYNYG 119

Query: 1019 NRLSAGSPYGPLHLS-----AXXXXXXXXXXXXXXXXMDRYXXXXXXXXXXXXXARQGVY 855
            +RLSAGSPY PLHLS     +                +DRY              R G +
Sbjct: 120  SRLSAGSPYRPLHLSGPPPYSSGSMMGNGGMYGMPPLVDRY-GLGLPMGHAAMGPRPGFF 178

Query: 854  PNETPPKKSADTIRDSDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQTSKAEKSSKSKMP 675
            P++   KK  D  RD+DWTCP CGNVNFSFRTVCNMRKCNTPKPGSQ +K+EK+SK KMP
Sbjct: 179  PDDKSQKK--DATRDNDWTCPKCGNVNFSFRTVCNMRKCNTPKPGSQAAKSEKNSKQKMP 236

Query: 674  EGSWKCGKCNNINFPFRTKCNRQNCGADKPSESNESPRAEASGEDDQ 534
            +GSWKC KC+NIN+PFRTKCNRQNCGADKPSES +SP + +  E+DQ
Sbjct: 237  DGSWKCEKCSNINYPFRTKCNRQNCGADKPSESTKSP-SPSPDENDQ 282


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