BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006665
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39438.3| unnamed protein product [Vitis vinifera]              243   9e-63
ref|XP_002266620.1| PREDICTED: uncharacterized WD repeat-contain...   243   9e-63
ref|XP_002302896.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
gb|AFX67015.1| WD-repeat protein, partial [Solanum tuberosum]         219   1e-55
gb|EAZ35986.1| hypothetical protein OsJ_20288 [Oryza sativa Japo...   216   1e-54

>emb|CBI39438.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  243 bits (621), Expect = 9e-63
 Identities = 123/213 (57%), Positives = 148/213 (69%), Gaps = 44/213 (20%)
 Frame = +3

Query: 3   QISTLAVKNNLLVAGGFQGEVTCKNLDRKGVSFCTKTTYDDNSITNAIDIFNGLR----- 167
           QISTLAVK+N LVAGGFQGE+TCK LD++GVSFCT+TTYDDN+ITNA++I++  R     
Sbjct: 273 QISTLAVKDNFLVAGGFQGELTCKRLDKEGVSFCTRTTYDDNAITNALEIYDSPRGGIHF 332

Query: 168 ---------------------------------------LAAVVGDHLD*ALVDSQSGKV 230
                                                  L  VVGDHL   LVDS +GK 
Sbjct: 333 MASNNDCGVREYDMESFQLLNHFRFPWPVNHTSISPDRKLITVVGDHLHGLLVDSHNGKT 392

Query: 231 VTSLVGHLDYSFATAWHPNGHILAT*NRDRTCRVWDTRYLASPVAVLKGNLGAIRSIRFS 410
           V+S+VGHLDYSFA+AWHPNG+I AT N+D+TCRVWD R + +P+AVLKGNLGA+RSIRFS
Sbjct: 393 VSSVVGHLDYSFASAWHPNGNIFATGNQDKTCRVWDARKVGTPIAVLKGNLGAVRSIRFS 452

Query: 411 SDGKFMAVAEPSDFVHIYNPTLDYKRRQEIDFF 509
           SDG+FM VAEP+DFVH+Y+   DYK RQEIDFF
Sbjct: 453 SDGQFMVVAEPADFVHVYDTKADYKMRQEIDFF 485


>ref|XP_002266620.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 443

 Score =  243 bits (621), Expect = 9e-63
 Identities = 123/213 (57%), Positives = 148/213 (69%), Gaps = 44/213 (20%)
 Frame = +3

Query: 3   QISTLAVKNNLLVAGGFQGEVTCKNLDRKGVSFCTKTTYDDNSITNAIDIFNGLR----- 167
           QISTLAVK+N LVAGGFQGE+TCK LD++GVSFCT+TTYDDN+ITNA++I++  R     
Sbjct: 188 QISTLAVKDNFLVAGGFQGELTCKRLDKEGVSFCTRTTYDDNAITNALEIYDSPRGGIHF 247

Query: 168 ---------------------------------------LAAVVGDHLD*ALVDSQSGKV 230
                                                  L  VVGDHL   LVDS +GK 
Sbjct: 248 MASNNDCGVREYDMESFQLLNHFRFPWPVNHTSISPDRKLITVVGDHLHGLLVDSHNGKT 307

Query: 231 VTSLVGHLDYSFATAWHPNGHILAT*NRDRTCRVWDTRYLASPVAVLKGNLGAIRSIRFS 410
           V+S+VGHLDYSFA+AWHPNG+I AT N+D+TCRVWD R + +P+AVLKGNLGA+RSIRFS
Sbjct: 308 VSSVVGHLDYSFASAWHPNGNIFATGNQDKTCRVWDARKVGTPIAVLKGNLGAVRSIRFS 367

Query: 411 SDGKFMAVAEPSDFVHIYNPTLDYKRRQEIDFF 509
           SDG+FM VAEP+DFVH+Y+   DYK RQEIDFF
Sbjct: 368 SDGQFMVVAEPADFVHVYDTKADYKMRQEIDFF 400


>ref|XP_002302896.1| predicted protein [Populus trichocarpa] gi|222844622|gb|EEE82169.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  239 bits (610), Expect = 2e-61
 Identities = 121/213 (56%), Positives = 150/213 (70%), Gaps = 44/213 (20%)
 Frame = +3

Query: 3   QISTLAVKNNLLVAGGFQGEVTCKNLDRKGVSFCTKTTYDDNSITNAIDIFNGLR----- 167
           QIST+AVK+N LVAGGF GE+TCK LD++GVSFCT+TTYDDN+ITNAI+I++ +R     
Sbjct: 146 QISTIAVKDNFLVAGGFHGELTCKRLDKQGVSFCTRTTYDDNAITNAIEIYDSMRGGIRF 205

Query: 168 ---------------------------------------LAAVVGDHLD*ALVDSQSGKV 230
                                                  L AVVGD+LD  LVDSQSGK 
Sbjct: 206 MSSNNDGGLREYDLETFQLLNHFRFPWPVNHTSVSPDRRLIAVVGDNLDGLLVDSQSGKT 265

Query: 231 VTSLVGHLDYSFATAWHPNGHILAT*NRDRTCRVWDTRYLASPVAVLKGNLGAIRSIRFS 410
           V+++ GHLDYSFA+AWHP+G++ AT N+D+TCRVWD R L+SP A+LKGNLGA+RSI FS
Sbjct: 266 VSTVEGHLDYSFASAWHPDGNVFATGNQDKTCRVWDIRKLSSPTAILKGNLGAVRSICFS 325

Query: 411 SDGKFMAVAEPSDFVHIYNPTLDYKRRQEIDFF 509
           SDG+FM VAEP+DFVH+Y+   DY+RRQEIDFF
Sbjct: 326 SDGQFMYVAEPADFVHVYSTQDDYRRRQEIDFF 358


>gb|AFX67015.1| WD-repeat protein, partial [Solanum tuberosum]
          Length = 312

 Score =  219 bits (559), Expect = 1e-55
 Identities = 113/213 (53%), Positives = 139/213 (65%), Gaps = 44/213 (20%)
 Frame = +3

Query: 3   QISTLAVKNNLLVAGGFQGEVTCKNLDRKGVSFCTKTTYDDNSITNAIDIFN----GLRL 170
           QI T+AV N  +VAGGFQGE+ CK+LD+ GVSFC +TTY+DN+ITNA++I+     GLR 
Sbjct: 57  QIGTMAVNNRFVVAGGFQGELICKSLDKPGVSFCARTTYEDNAITNAVEIYESVSCGLRF 116

Query: 171 AA----------------------------------------VVGDHLD*ALVDSQSGKV 230
            A                                        VVGD LD  LVDS++GK 
Sbjct: 117 MAANNDCGVRVYDMEKFQQMNHFRFPWPVNHTSMSPDCKLFTVVGDDLDGLLVDSRNGKT 176

Query: 231 VTSLVGHLDYSFATAWHPNGHILAT*NRDRTCRVWDTRYLASPVAVLKGNLGAIRSIRFS 410
           V S+VGHLDYSFA AWHP+G   AT N+D+TCR+WD R L+S  A+LKGN+GA RSIRFS
Sbjct: 177 VASIVGHLDYSFACAWHPDGRTFATGNQDKTCRIWDLRNLSSSTAILKGNIGAARSIRFS 236

Query: 411 SDGKFMAVAEPSDFVHIYNPTLDYKRRQEIDFF 509
           SDG+F+ VAEP+DFVHIY+   DYK+RQEID F
Sbjct: 237 SDGQFLVVAEPADFVHIYSTKSDYKKRQEIDLF 269


>gb|EAZ35986.1| hypothetical protein OsJ_20288 [Oryza sativa Japonica Group]
          Length = 383

 Score =  216 bits (551), Expect = 1e-54
 Identities = 106/184 (57%), Positives = 135/184 (73%), Gaps = 15/184 (8%)
 Frame = +3

Query: 3   QISTLAVKNNLLVAGGFQGEVTCKNLDRKGVSFCTKTTYDDNSITNAIDIFNGL------ 164
           Q+STL+V   LLVAGGFQGE+ CK +  + V FCT+TT  DN+ITNAIDI          
Sbjct: 157 QVSTLSVNEGLLVAGGFQGELICKVVGDRDVKFCTRTTLSDNAITNAIDIHRSASYNWPV 216

Query: 165 ---------RLAAVVGDHLD*ALVDSQSGKVVTSLVGHLDYSFATAWHPNGHILAT*NRD 317
                    +L AVVGD  D  LVDS++GKV ++LVGHLDYSFA+AWHP+G   AT N+D
Sbjct: 217 NHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQD 276

Query: 318 RTCRVWDTRYLASPVAVLKGNLGAIRSIRFSSDGKFMAVAEPSDFVHIYNPTLDYKRRQE 497
           +TCRVWD R L++ ++VL+GN+GAIR IR+SSDG+FM  +EP+DFVH+Y+   DYK+RQE
Sbjct: 277 KTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQE 336

Query: 498 IDFF 509
           IDFF
Sbjct: 337 IDFF 340