BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006662
         (1285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146486.1| PREDICTED: protein FMP32, mitochondrial-like...   303   5e-80
ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78
ref|XP_002533806.1| conserved hypothetical protein [Ricinus comm...   291   3e-76
ref|NP_565388.1| uncharacterized protein [Arabidopsis thaliana] ...   290   4e-76
ref|XP_002886229.1| hypothetical protein ARALYDRAFT_900313 [Arab...   290   6e-76

>ref|XP_004146486.1| PREDICTED: protein FMP32, mitochondrial-like [Cucumis sativus]
           gi|449515255|ref|XP_004164665.1| PREDICTED: protein
           FMP32, mitochondrial-like [Cucumis sativus]
          Length = 249

 Score =  303 bits (777), Expect = 5e-80
 Identities = 175/254 (68%), Positives = 194/254 (76%), Gaps = 1/254 (0%)
 Frame = +2

Query: 230 MAIAASCKRLAVQIGTNTNLLHKSRGFHVSSLSSSIAIDHILRRGDADVPSLRSPINNKF 409
           MA  A+CKR+  Q+  N+ L       +VSS  SSI  DH      A + SL S   + +
Sbjct: 1   MAAGAACKRVG-QLVANSGLRRLGVS-NVSSFESSI-FDHSANNLSASI-SLISRYRH-Y 55

Query: 410 DCRNFS-LVKQNGKRAFLVDTLALVRGLEAQGVPSKQAEAITAAVIEVLNDSLENVAHSF 586
           +CR  S LVK NGKR FLVDTLALVR LE QGVPS QAEAITAA+ EVLNDSLEN++HSF
Sbjct: 56  ECRQISQLVKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSF 115

Query: 587 VSKLEMQKIEMTQEANXXXXXXXXXXXXEHHFSSLQRETEKLRNDIEKMRSELRYEIDKV 766
           VSK EMQKIEM Q++N             HHFS L  ETEKLRNDIEKMRSELRYEIDKV
Sbjct: 116 VSKGEMQKIEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKV 175

Query: 767 TAGQRLDLNLERGRIRDELANQNAETSNLTNRLDREIHALRAQLEAAKYDVIKYCVGTIV 946
           TAGQRLDLNLERGRIRDELANQNAET+NLTN+LDREIH LRAQLEAAKYDVIKYC+GT+V
Sbjct: 176 TAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLV 235

Query: 947 SISAVGLATIRILM 988
           SISAVGLA +RILM
Sbjct: 236 SISAVGLAVLRILM 249


>ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|222849421|gb|EEE86968.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  298 bits (764), Expect = 2e-78
 Identities = 159/206 (77%), Positives = 175/206 (84%), Gaps = 2/206 (0%)
 Frame = +2

Query: 377 PSLRSPINNKFDCRNFS-LVK-QNGKRAFLVDTLALVRGLEAQGVPSKQAEAITAAVIEV 550
           PS  S   N+FD R+ S LV+  N KRAFLVDTLALVRGLE+QGVPSKQAEAITAA+ EV
Sbjct: 26  PSSSSSFGNRFDYRHISQLVRPNNNKRAFLVDTLALVRGLESQGVPSKQAEAITAAITEV 85

Query: 551 LNDSLENVAHSFVSKLEMQKIEMTQEANXXXXXXXXXXXXEHHFSSLQRETEKLRNDIEK 730
           LNDSLENVA+SFVSK EMQK EM Q++N            EHHFS LQRETEKLR DI+K
Sbjct: 86  LNDSLENVAYSFVSKAEMQKSEMIQDSNLSKFKSEVQSSQEHHFSLLQRETEKLRGDIDK 145

Query: 731 MRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETSNLTNRLDREIHALRAQLEAAK 910
           MRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAET+NLTN+LDREIHALRA LEAAK
Sbjct: 146 MRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHALRAHLEAAK 205

Query: 911 YDVIKYCVGTIVSISAVGLATIRILM 988
           YDVIKYC+GT+VSI AVG+AT+RIL+
Sbjct: 206 YDVIKYCIGTLVSICAVGIATVRILL 231


>ref|XP_002533806.1| conserved hypothetical protein [Ricinus communis]
           gi|223526260|gb|EEF28575.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  291 bits (744), Expect = 3e-76
 Identities = 154/193 (79%), Positives = 164/193 (84%), Gaps = 1/193 (0%)
 Frame = +2

Query: 413 CRNFS-LVKQNGKRAFLVDTLALVRGLEAQGVPSKQAEAITAAVIEVLNDSLENVAHSFV 589
           CR  S  VK NG+R FLVDTLALVR LEAQGVPSKQAEAIT A+ EVLNDSLENV+HS V
Sbjct: 46  CRQISQFVKSNGRRVFLVDTLALVRRLEAQGVPSKQAEAITGAITEVLNDSLENVSHSVV 105

Query: 590 SKLEMQKIEMTQEANXXXXXXXXXXXXEHHFSSLQRETEKLRNDIEKMRSELRYEIDKVT 769
           SK EMQK EM QE N            EHHFS LQ ETEKLR+DIEKMRSELR+EIDKVT
Sbjct: 106 SKTEMQKTEMIQETNLSKFKSEVQSSQEHHFSLLQHETEKLRHDIEKMRSELRHEIDKVT 165

Query: 770 AGQRLDLNLERGRIRDELANQNAETSNLTNRLDREIHALRAQLEAAKYDVIKYCVGTIVS 949
           AGQRLDLNLERGRIRDELA+QNAETSNLTN+LDREIHALRAQLEAAKYDVIKYC+GT+VS
Sbjct: 166 AGQRLDLNLERGRIRDELADQNAETSNLTNKLDREIHALRAQLEAAKYDVIKYCIGTLVS 225

Query: 950 ISAVGLATIRILM 988
           ISAVGLA +RILM
Sbjct: 226 ISAVGLAVLRILM 238


>ref|NP_565388.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17529264|gb|AAL38859.1| unknown protein [Arabidopsis
           thaliana] gi|20198032|gb|AAD22294.2| expressed protein
           [Arabidopsis thaliana] gi|21536621|gb|AAM60953.1|
           unknown [Arabidopsis thaliana]
           gi|29824341|gb|AAP04131.1| unknown protein [Arabidopsis
           thaliana] gi|330251406|gb|AEC06500.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 230

 Score =  290 bits (743), Expect = 4e-76
 Identities = 152/195 (77%), Positives = 168/195 (86%), Gaps = 1/195 (0%)
 Frame = +2

Query: 407 FDCRNFS-LVKQNGKRAFLVDTLALVRGLEAQGVPSKQAEAITAAVIEVLNDSLENVAHS 583
           F  R FS L K NG+RAFLVDTLALVR LEAQGVPSKQAEAIT+A+ EVLNDSLENV+ S
Sbjct: 36  FPYRQFSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVLNDSLENVSES 95

Query: 584 FVSKLEMQKIEMTQEANXXXXXXXXXXXXEHHFSSLQRETEKLRNDIEKMRSELRYEIDK 763
           FVSK EMQKIEM Q++N            EHHF+ LQRETEKLR DIEKMRSELRYEIDK
Sbjct: 96  FVSKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKMRSELRYEIDK 155

Query: 764 VTAGQRLDLNLERGRIRDELANQNAETSNLTNRLDREIHALRAQLEAAKYDVIKYCVGTI 943
           VTAGQRLDLNLERGRIRDELANQN ET+NLTN+LDREIHALRAQLEA+KY+VIKYC+GT+
Sbjct: 156 VTAGQRLDLNLERGRIRDELANQNTETTNLTNKLDREIHALRAQLEASKYEVIKYCIGTL 215

Query: 944 VSISAVGLATIRILM 988
           VSISAVGLA +RI++
Sbjct: 216 VSISAVGLAVLRIMI 230


>ref|XP_002886229.1| hypothetical protein ARALYDRAFT_900313 [Arabidopsis lyrata subsp.
           lyrata] gi|297332069|gb|EFH62488.1| hypothetical protein
           ARALYDRAFT_900313 [Arabidopsis lyrata subsp. lyrata]
          Length = 230

 Score =  290 bits (742), Expect = 6e-76
 Identities = 154/206 (74%), Positives = 172/206 (83%), Gaps = 1/206 (0%)
 Frame = +2

Query: 374 VPSLRSPINNKFDCRNFS-LVKQNGKRAFLVDTLALVRGLEAQGVPSKQAEAITAAVIEV 550
           V SL      +F  R +S L K NG+RAFLVDTLALVR LEAQGVPSKQAEAIT+A+ EV
Sbjct: 25  VSSLGLLNRRQFPYRQYSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEV 84

Query: 551 LNDSLENVAHSFVSKLEMQKIEMTQEANXXXXXXXXXXXXEHHFSSLQRETEKLRNDIEK 730
           LNDSLENV+ SFVSK EMQKIEM Q++N            EHHF+ LQRETEKLR DIEK
Sbjct: 85  LNDSLENVSESFVSKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEK 144

Query: 731 MRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETSNLTNRLDREIHALRAQLEAAK 910
           MRSELRYEIDKVTAGQRLDLNLERGRIRDELANQN ET+NLTN+LDREIHALRAQLEA+K
Sbjct: 145 MRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNTETTNLTNKLDREIHALRAQLEASK 204

Query: 911 YDVIKYCVGTIVSISAVGLATIRILM 988
           Y+VIKYC+GT+VSISAVGLA +RI++
Sbjct: 205 YEVIKYCIGTLVSISAVGLAVLRIMI 230