BLASTX nr result

ID: Coptis25_contig00006652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006652
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine d...   698   0.0  
emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]   698   0.0  
ref|XP_002329736.1| predicted protein [Populus trichocarpa] gi|2...   696   0.0  
ref|XP_004137515.1| PREDICTED: NAD-dependent dihydropyrimidine d...   695   0.0  
dbj|BAA86060.1| JPR ORF1 [Pyrus pyrifolia]                            695   0.0  

>ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
            [Vitis vinifera]
          Length = 421

 Score =  698 bits (1802), Expect = 0.0
 Identities = 340/385 (88%), Positives = 363/385 (94%)
 Frame = +3

Query: 9    SEESKPKPDLSVNVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKV 188
            + E + +PDLSV VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSL+A KV
Sbjct: 38   ASEGQAEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKV 97

Query: 189  INVTPRYARLRAGANGSAKGQIIGWQNIELISDRPLEIMLKEFKKLKEEYPDRILIASVM 368
            INVTPRYARLR GANGSAKGQIIGW+NIELISDRPLE MLKEFK+LKEEYPDRILIAS+M
Sbjct: 98   INVTPRYARLRVGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIM 157

Query: 369  EEYDKHAWEELIDRVEQTGVDAIEVNFSCPHGMPERRMGAAVGQDCVLLEEVCDWVNAKA 548
            EEYDK AWEELIDRVEQTG+DA+E+NFSCPHGMPER+MGAAVGQDC LLEEVC W+NAKA
Sbjct: 158  EEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKA 217

Query: 549  TIPVWAKMTPNITDITQPARVALKSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPG 728
            T+PVWAKMTPNITDITQPARVAL SGCEG++AINTIMSVMGINLNTLRPEPCVEGYSTPG
Sbjct: 218  TVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPG 277

Query: 729  GYSCKAVHPIALAKVMNIAQMMKSEFDDKHYSLSGIGGVETGSDAAEFILLGANTVQVCT 908
            GYSCKAVHPIAL KVM+IA+MMK+EF +  YSLSGIGGVETG DAAEFILLGANTVQVCT
Sbjct: 278  GYSCKAVHPIALGKVMSIAKMMKAEFGE-DYSLSGIGGVETGGDAAEFILLGANTVQVCT 336

Query: 909  GVMMHGYGLVKQLCSELSDFMIKHNFSSIEDFRGASLPYFTTHTDLVVRQREAIRQRKAI 1088
            GVMMHGYGLVK+LCSEL DFM  HNFSSIEDFRGASL YFTTHTDLV RQ+EAIRQRKAI
Sbjct: 337  GVMMHGYGLVKKLCSELKDFMKMHNFSSIEDFRGASLEYFTTHTDLVQRQQEAIRQRKAI 396

Query: 1089 KQGLQSDKDWTGDGFVKETESMVSN 1163
            +QGLQSDKDWTGDGFVKE+ESMVSN
Sbjct: 397  RQGLQSDKDWTGDGFVKESESMVSN 421


>emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]
          Length = 401

 Score =  698 bits (1802), Expect = 0.0
 Identities = 340/385 (88%), Positives = 363/385 (94%)
 Frame = +3

Query: 9    SEESKPKPDLSVNVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKV 188
            + E + +PDLSV VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSL+A KV
Sbjct: 18   ASEGQAEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKV 77

Query: 189  INVTPRYARLRAGANGSAKGQIIGWQNIELISDRPLEIMLKEFKKLKEEYPDRILIASVM 368
            INVTPRYARLR GANGSAKGQIIGW+NIELISDRPLE MLKEFK+LKEEYPDRILIAS+M
Sbjct: 78   INVTPRYARLRVGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIM 137

Query: 369  EEYDKHAWEELIDRVEQTGVDAIEVNFSCPHGMPERRMGAAVGQDCVLLEEVCDWVNAKA 548
            EEYDK AWEELIDRVEQTG+DA+E+NFSCPHGMPER+MGAAVGQDC LLEEVC W+NAKA
Sbjct: 138  EEYDKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKA 197

Query: 549  TIPVWAKMTPNITDITQPARVALKSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPG 728
            T+PVWAKMTPNITDITQPARVAL SGCEG++AINTIMSVMGINLNTLRPEPCVEGYSTPG
Sbjct: 198  TVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPG 257

Query: 729  GYSCKAVHPIALAKVMNIAQMMKSEFDDKHYSLSGIGGVETGSDAAEFILLGANTVQVCT 908
            GYSCKAVHPIAL KVM+IA+MMK+EF +  YSLSGIGGVETG DAAEFILLGANTVQVCT
Sbjct: 258  GYSCKAVHPIALGKVMSIAKMMKAEFGE-DYSLSGIGGVETGGDAAEFILLGANTVQVCT 316

Query: 909  GVMMHGYGLVKQLCSELSDFMIKHNFSSIEDFRGASLPYFTTHTDLVVRQREAIRQRKAI 1088
            GVMMHGYGLVK+LCSEL DFM  HNFSSIEDFRGASL YFTTHTDLV RQ+EAIRQRKAI
Sbjct: 317  GVMMHGYGLVKKLCSELKDFMKMHNFSSIEDFRGASLEYFTTHTDLVQRQQEAIRQRKAI 376

Query: 1089 KQGLQSDKDWTGDGFVKETESMVSN 1163
            +QGLQSDKDWTGDGFVKE+ESMVSN
Sbjct: 377  RQGLQSDKDWTGDGFVKESESMVSN 401


>ref|XP_002329736.1| predicted protein [Populus trichocarpa] gi|222870644|gb|EEF07775.1|
            predicted protein [Populus trichocarpa]
          Length = 425

 Score =  696 bits (1795), Expect = 0.0
 Identities = 339/386 (87%), Positives = 364/386 (94%)
 Frame = +3

Query: 6    SSEESKPKPDLSVNVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADK 185
            S  +++ +PDLSV VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSL+A K
Sbjct: 40   SQGQNQGEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAK 99

Query: 186  VINVTPRYARLRAGANGSAKGQIIGWQNIELISDRPLEIMLKEFKKLKEEYPDRILIASV 365
            VINVTPRYARLRAGANGSAKGQIIGW+NIELISDRPLE MLKEFK+LKEEYPDRILIAS+
Sbjct: 100  VINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASI 159

Query: 366  MEEYDKHAWEELIDRVEQTGVDAIEVNFSCPHGMPERRMGAAVGQDCVLLEEVCDWVNAK 545
            MEEY+K AWEELIDRVEQTG+DA+E+NFSCPHGMPER+MGAAVGQDC LLEEVC W+NAK
Sbjct: 160  MEEYNKAAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAK 219

Query: 546  ATIPVWAKMTPNITDITQPARVALKSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTP 725
            AT+PVWAKMTPNITDITQPARV+LKSGCEG+AAINTIMSVMGINL TLRPEPCVEGYSTP
Sbjct: 220  ATVPVWAKMTPNITDITQPARVSLKSGCEGVAAINTIMSVMGINLKTLRPEPCVEGYSTP 279

Query: 726  GGYSCKAVHPIALAKVMNIAQMMKSEFDDKHYSLSGIGGVETGSDAAEFILLGANTVQVC 905
            GGYS KAVHPIAL KVM+IA+MMKSEFD + YSLSGIGGVETGSDAAEFIL+GANTVQVC
Sbjct: 280  GGYSSKAVHPIALGKVMSIAKMMKSEFDLEQYSLSGIGGVETGSDAAEFILVGANTVQVC 339

Query: 906  TGVMMHGYGLVKQLCSELSDFMIKHNFSSIEDFRGASLPYFTTHTDLVVRQREAIRQRKA 1085
            TGVMMHGYGLVK+LC EL DFM  HNFSSIEDFRGASL YFTTH DLV RQ+EAI+QRKA
Sbjct: 340  TGVMMHGYGLVKKLCDELKDFMKMHNFSSIEDFRGASLEYFTTHMDLVRRQQEAIQQRKA 399

Query: 1086 IKQGLQSDKDWTGDGFVKETESMVSN 1163
            IK+GLQSDKDWTGDGFVKETESMVSN
Sbjct: 400  IKKGLQSDKDWTGDGFVKETESMVSN 425


>ref|XP_004137515.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit
            PreA-like [Cucumis sativus]
            gi|449520940|ref|XP_004167490.1| PREDICTED: NAD-dependent
            dihydropyrimidine dehydrogenase subunit PreA-like
            [Cucumis sativus]
          Length = 424

 Score =  695 bits (1794), Expect = 0.0
 Identities = 340/386 (88%), Positives = 364/386 (94%)
 Frame = +3

Query: 6    SSEESKPKPDLSVNVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADK 185
            +S  ++ +PDLSV VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSL+A K
Sbjct: 39   ASGGAQAEPDLSVTVNGLNMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAK 98

Query: 186  VINVTPRYARLRAGANGSAKGQIIGWQNIELISDRPLEIMLKEFKKLKEEYPDRILIASV 365
            VINVTPRYARLRA +NGSAKGQIIGW+NIELISDRPLEIMLKEFK+LKEEYPDRILIAS+
Sbjct: 99   VINVTPRYARLRADSNGSAKGQIIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASI 158

Query: 366  MEEYDKHAWEELIDRVEQTGVDAIEVNFSCPHGMPERRMGAAVGQDCVLLEEVCDWVNAK 545
            MEEY+K AWEELIDRVEQTGVDA E+NFSCPHGMPERRMGAAVGQDC LLEEVC W+NAK
Sbjct: 159  MEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAK 218

Query: 546  ATIPVWAKMTPNITDITQPARVALKSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTP 725
            ATIPVWAKMTPNITDI+QPARVALKSGCEGIAAINTIMSVMGI+L TLRPEPCVEGYSTP
Sbjct: 219  ATIPVWAKMTPNITDISQPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTP 278

Query: 726  GGYSCKAVHPIALAKVMNIAQMMKSEFDDKHYSLSGIGGVETGSDAAEFILLGANTVQVC 905
            GGYS KAVHPIAL KV++IA+MMK+EF+D  YSLSGIGGVETG DAAEFILLGANTVQVC
Sbjct: 279  GGYSSKAVHPIALGKVLSIAKMMKAEFNDGDYSLSGIGGVETGGDAAEFILLGANTVQVC 338

Query: 906  TGVMMHGYGLVKQLCSELSDFMIKHNFSSIEDFRGASLPYFTTHTDLVVRQREAIRQRKA 1085
            TGVMMHGYG+VK+LC+EL DFM  HNFSSIEDFRGASLPYFTTHTDLV RQREAI QRKA
Sbjct: 339  TGVMMHGYGVVKKLCAELQDFMKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKA 398

Query: 1086 IKQGLQSDKDWTGDGFVKETESMVSN 1163
            +K+GLQSDKDWTGDGFVKETESMVSN
Sbjct: 399  VKKGLQSDKDWTGDGFVKETESMVSN 424


>dbj|BAA86060.1| JPR ORF1 [Pyrus pyrifolia]
          Length = 424

 Score =  695 bits (1794), Expect = 0.0
 Identities = 337/385 (87%), Positives = 362/385 (94%)
 Frame = +3

Query: 9    SEESKPKPDLSVNVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKV 188
            + ESK +PDLSV VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKV
Sbjct: 40   ASESKAEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKV 99

Query: 189  INVTPRYARLRAGANGSAKGQIIGWQNIELISDRPLEIMLKEFKKLKEEYPDRILIASVM 368
             NVTPRYARLR   NGSAKGQIIGW+NIELISDRPL+IMLKEFK+LK+EYPDRILIAS+M
Sbjct: 100  KNVTPRYARLRVDGNGSAKGQIIGWENIELISDRPLDIMLKEFKQLKQEYPDRILIASIM 159

Query: 369  EEYDKHAWEELIDRVEQTGVDAIEVNFSCPHGMPERRMGAAVGQDCVLLEEVCDWVNAKA 548
            EEY+K  WEELIDRVEQTGVDA+E+NFSCPHGMPER+MGAAVGQDC LLEEVC W+NAKA
Sbjct: 160  EEYNKAGWEELIDRVEQTGVDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKA 219

Query: 549  TIPVWAKMTPNITDITQPARVALKSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPG 728
            T+PVWAKMTPNITDITQPARVAL SGCEG++AINTIMSVMGINL TLRPEPCVEGYSTPG
Sbjct: 220  TVPVWAKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLTTLRPEPCVEGYSTPG 279

Query: 729  GYSCKAVHPIALAKVMNIAQMMKSEFDDKHYSLSGIGGVETGSDAAEFILLGANTVQVCT 908
            GYS KAVHPIALAKVMNIA++MKSEF D  YSLSGIGGVE+G DAAEFILLGANTVQVCT
Sbjct: 280  GYSAKAVHPIALAKVMNIAKLMKSEFGDTDYSLSGIGGVESGGDAAEFILLGANTVQVCT 339

Query: 909  GVMMHGYGLVKQLCSELSDFMIKHNFSSIEDFRGASLPYFTTHTDLVVRQREAIRQRKAI 1088
            GVMMHGYG+VK+LCSEL DFM +HNFSSIEDFRGASL YFTTHTDLV RQ+EAI+QRKAI
Sbjct: 340  GVMMHGYGVVKKLCSELQDFMKQHNFSSIEDFRGASLEYFTTHTDLVRRQQEAIKQRKAI 399

Query: 1089 KQGLQSDKDWTGDGFVKETESMVSN 1163
            ++GLQSDKDWTGDGFVKETESMVSN
Sbjct: 400  RKGLQSDKDWTGDGFVKETESMVSN 424


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