BLASTX nr result

ID: Coptis25_contig00006648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006648
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...   251   2e-64
ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...   243   4e-62
ref|NP_194028.2| separase [Arabidopsis thaliana] gi|57019012|gb|...   232   1e-58
ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287...   231   2e-58

>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score =  251 bits (641), Expect = 2e-64
 Identities = 141/320 (44%), Positives = 191/320 (59%), Gaps = 8/320 (2%)
 Frame = -3

Query: 938  FNMLRCAPGRIDDLEKFVIDFFRLLPSTTVICISLLGADYASLFMDVLPGHFSSSAWILL 759
            +N+LR AP  +  LE+FV+ FF  LP TTVICISLLG   ASL  ++L    S +AW+LL
Sbjct: 1619 YNLLRLAPESLQGLEEFVMKFFEDLPCTTVICISLLGGALASLLRELLNYPSSVNAWVLL 1678

Query: 758  SRLNSDNEPLTMLLPSD-VIPDYGNRDKNCST--LYEGTDSKNMWFCPWGGTTVDDIAPG 588
            SRLN  ++P+ +LLP D V+ +  + D +  +   YE  D    W CPWG T VDD+ P 
Sbjct: 1679 SRLNMKSQPVVILLPVDSVLEEVSDDDASSESGIHYEHKDLDKQWHCPWGSTVVDDVTPA 1738

Query: 587  FKRILQESYLSSSFSA--HTQHEKSLWWTWRRKLNDRLDNFLRSLEQSWLGPWKCLLLGE 414
            FK IL+E+YLSSS      T+  +  WWT R+KL+ RL   LR LE  WLGPW+ LLLGE
Sbjct: 1739 FKTILEENYLSSSTFPLDDTKENRLQWWTQRKKLDHRLGKLLRDLEDLWLGPWRYLLLGE 1798

Query: 413  LLHSTCLDTALIKMTTFLKCNFELNANQNLLRVILGGXXXXXXXXXXXCQMLVPKCCITR 234
             L    LD    K+   LK   +++ N++LL++ILG             Q+ + K C   
Sbjct: 1799 CLDCERLDLIHKKLVHDLKSKCKMDVNESLLKIILGSARYSHGREQCFLQLYLNKGCYIG 1858

Query: 233  SESCPNKKLNISSFT--CAQAKSLSGFLHQLISEATYKL-EAEFIERRPVIMVLDSDVQM 63
                 ++K     F+  C + +  S   +QLIS A  +L E E + R P+I+VLD +VQM
Sbjct: 1859 RVGFYDEKTRCKVFSNPCDRVEKKSALANQLISGAAEELEEEESVNREPIILVLDCEVQM 1918

Query: 62   LPWENLPVLRKEEVYRMPSV 3
            LPWEN+PVLR +EVYRMPS+
Sbjct: 1919 LPWENIPVLRTQEVYRMPSI 1938


>ref|XP_002303175.1| predicted protein [Populus trichocarpa] gi|222840607|gb|EEE78154.1|
            predicted protein [Populus trichocarpa]
          Length = 713

 Score =  244 bits (622), Expect = 3e-62
 Identities = 140/320 (43%), Positives = 193/320 (60%), Gaps = 9/320 (2%)
 Frame = -3

Query: 935  NMLRCAPGRIDDLEKFVIDFFRLLPSTTVICISLLGADYASLFMDVLPGHFSSSAWILLS 756
            N+ R AP    DLE+FV +F+  LP TTVICISL+G   A+L  D+L      SAW+LLS
Sbjct: 134  NLPRLAPESFQDLEQFVTEFYSGLPCTTVICISLIGGPCANLLKDLLQYPSCISAWMLLS 193

Query: 755  RLNSDNEPLTMLLP-SDVIPDYGNRDKNCSTLYEGTDSKNM---WFCPWGGTTVDDIAPG 588
            RL   ++P+ MLLP + V+ +  + D   S   E   S N+   W CPWG T VDD+AP 
Sbjct: 194  RLKFKSQPIMMLLPVNKVLEETSDDDCAMSCTGEFLVSNNLDKHWHCPWGSTVVDDVAPT 253

Query: 587  FKRILQESYLSSSFSA--HTQHEKSLWWTWRRKLNDRLDNFLRSLEQSWLGPWKCLLLGE 414
            F+ IL+E+YLSSS      T+  ++LWWT R++L+ RL   LR +E SWLGPW+C+LLG+
Sbjct: 254  FRFILEENYLSSSKFPLEDTKENRNLWWTKRKELDHRLGKLLRKIEDSWLGPWRCVLLGD 313

Query: 413  LLHSTCLDTALIKMTTFLKCNFELNANQNLLRVILGGXXXXXXXXXXXCQMLVPK--CCI 240
              + + LD+ + K+   LK   ++N N++ L+VIL G             ++  K  C I
Sbjct: 314  WFNYSRLDSIMKKLVHDLKSKCKINTNESFLKVILQGAGHSFNEEACISSLMSLKKGCFI 373

Query: 239  TRSESCPNKKLNISSFTCAQAKSLSGFLHQLISEATYKL-EAEFIERRPVIMVLDSDVQM 63
             ++     K+  I S     AK LS    QL+ +A  +L E E   R PVI+VLD +VQM
Sbjct: 374  AQAGYSEEKRCEIFSEVSEGAKKLSDLAVQLVYDAVNELQEEESTIREPVILVLDYEVQM 433

Query: 62   LPWENLPVLRKEEVYRMPSV 3
            LPWEN+P+LR +EVYRMPSV
Sbjct: 434  LPWENIPILRNQEVYRMPSV 453


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score =  243 bits (621), Expect = 4e-62
 Identities = 137/324 (42%), Positives = 187/324 (57%), Gaps = 13/324 (4%)
 Frame = -3

Query: 935  NMLRCAPGRIDDLEKFVIDFFRLLPSTTVICISLLGADYASLFMDVLPGHFSSSAWILLS 756
            N+   AP  + D+E FV DFF  LPST V+CISL+G  YA+L  ++L       AW+LLS
Sbjct: 1576 NLPSLAPKSLQDMEHFVTDFFSSLPSTMVVCISLIGDPYATLLQELLMYPSRVCAWMLLS 1635

Query: 755  RLNSDNEPLTMLLPSDVIPDYGNRD----KNCSTLYEGTDSKNMWFCPWGGTTVDDIAPG 588
            RLNS + P+ MLLP D+I +  + D           E  D    W CPWG T +D+++P 
Sbjct: 1636 RLNSKSHPIMMLLPVDLISEETSDDDAPNPGSEEFPESNDLDKHWHCPWGFTVIDEVSPA 1695

Query: 587  FKRILQESYLSSSF--SAHTQHEKSLWWTWRRKLNDRLDNFLRSLEQSWLGPWKCLLLGE 414
            FK IL+E+YLSSS      T+  ++LWW  R+KL+ +L   LR +E  WLGPW+C+LLGE
Sbjct: 1696 FKLILEENYLSSSIFPLEDTKENRTLWWMRRKKLDFQLGKLLRKMEDLWLGPWRCVLLGE 1755

Query: 413  LLHSTCLDTALIKMTTFLKCNFELNANQNLLRVILGGXXXXXXXXXXXCQML-------V 255
            L  S  LD+   K+   LK   +++ N++ L+VILGG             +L       +
Sbjct: 1756 LSDSKHLDSVQKKLMRNLKSKCKVDVNESFLKVILGGGKSVLDAEACIYDILFLKKGCFI 1815

Query: 254  PKCCITRSESCPNKKLNISSFTCAQAKSLSGFLHQLISEATYKLEAEFIERRPVIMVLDS 75
             K   +  E+C   K+    F     + L     QLI EA  +LE + + R P+I+VLD 
Sbjct: 1816 GKVIYSDEETC---KILTKEF---GVQKLPNLAIQLIHEAVNELEVDIVTREPLILVLDF 1869

Query: 74   DVQMLPWENLPVLRKEEVYRMPSV 3
            +VQMLPWENLPVLR +EVYRMPSV
Sbjct: 1870 EVQMLPWENLPVLRNQEVYRMPSV 1893


>ref|NP_194028.2| separase [Arabidopsis thaliana] gi|57019012|gb|AAW32909.1| separase
            [Arabidopsis thaliana] gi|332659286|gb|AEE84686.1|
            separase [Arabidopsis thaliana]
          Length = 2180

 Score =  232 bits (591), Expect = 1e-58
 Identities = 138/324 (42%), Positives = 187/324 (57%), Gaps = 16/324 (4%)
 Frame = -3

Query: 926  RCAPGRIDDLEKFVIDFFRLLPSTTVICISLLGADYASLFMDVLPGHFSSSAWILLSRLN 747
            R AP R  DL +F  +FF  LPS+T+ICISLLG     L  +++       AW+L+SRLN
Sbjct: 1593 RLAPDRTQDLVQFAKEFFINLPSSTIICISLLGGALNQLLQELMHIRSPVCAWVLISRLN 1652

Query: 746  SDNEPLTMLLPSD-VIPDYGNRDKNCSTLYEGTDSKNM---WFCPWGGTTVDDIAPGFKR 579
             +++P+  LLP D ++ D  +   N S+  E T  K++   W CPWG T VD++AP FK 
Sbjct: 1653 PESQPVATLLPVDSIVEDMSDDSANLSST-EATQVKSLKGPWLCPWGTTVVDEVAPAFKS 1711

Query: 578  ILQESYLSSSFSAH-TQHEKSLWWTWRRKLNDRLDNFLRSLEQSWLGPWKCLLLGELLHS 402
            IL+ES+ SSS +   T   + LWW  R+KLN RL  FLR+LE SWLGPW+CLLLGE  + 
Sbjct: 1712 ILEESHSSSSTTEEDTIESRGLWWKKRKKLNHRLGIFLRNLEASWLGPWRCLLLGEWSNY 1771

Query: 401  TCLDTALIKMTTFLKCNFELNANQNLLRVILGGXXXXXXXXXXXCQMLVPKCC------- 243
               D+A  K+   LK   ++  N+ LL+VILGG            Q+ +   C       
Sbjct: 1772 KLPDSAQKKLVNDLKSKCKMEVNEMLLKVILGGGTDNFKGEACVAQLSLRNGCYVGRGGY 1831

Query: 242  ITRSESC--PNKKLNISSFTCAQAKSLSGFLHQLISEATYKLEAE--FIERRPVIMVLDS 75
            +   +SC  P    NIS       +S      +LI +A  KL  +     R P+I+VLD 
Sbjct: 1832 LYEEDSCKTPTAASNIS-------ESRHELALKLIHDAASKLGQQDGHENREPIILVLDP 1884

Query: 74   DVQMLPWENLPVLRKEEVYRMPSV 3
            +VQMLPWEN+P+LRK+EVYRMPSV
Sbjct: 1885 EVQMLPWENIPILRKQEVYRMPSV 1908


>ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287|gb|AEE84687.1| separase
            [Arabidopsis thaliana]
          Length = 2177

 Score =  231 bits (589), Expect = 2e-58
 Identities = 134/320 (41%), Positives = 183/320 (57%), Gaps = 12/320 (3%)
 Frame = -3

Query: 926  RCAPGRIDDLEKFVIDFFRLLPSTTVICISLLGADYASLFMDVLPGHFSSSAWILLSRLN 747
            R AP R  DL +F  +FF  LPS+T+ICISLLG     L  +++       AW+L+SRLN
Sbjct: 1593 RLAPDRTQDLVQFAKEFFINLPSSTIICISLLGGALNQLLQELMHIRSPVCAWVLISRLN 1652

Query: 746  SDNEPLTMLLPSDVIPDYGNRDKNCSTLYEGTDSKNMWFCPWGGTTVDDIAPGFKRILQE 567
             +++P+  LLP D I +  + + + +   +    K  W CPWG T VD++AP FK IL+E
Sbjct: 1653 PESQPVATLLPVDSIVEDDSANLSSTEATQVKSLKGPWLCPWGTTVVDEVAPAFKSILEE 1712

Query: 566  SYLSSSFSAH-TQHEKSLWWTWRRKLNDRLDNFLRSLEQSWLGPWKCLLLGELLHSTCLD 390
            S+ SSS +   T   + LWW  R+KLN RL  FLR+LE SWLGPW+CLLLGE  +    D
Sbjct: 1713 SHSSSSTTEEDTIESRGLWWKKRKKLNHRLGIFLRNLEASWLGPWRCLLLGEWSNYKLPD 1772

Query: 389  TALIKMTTFLKCNFELNANQNLLRVILGGXXXXXXXXXXXCQMLVPKCC-------ITRS 231
            +A  K+   LK   ++  N+ LL+VILGG            Q+ +   C       +   
Sbjct: 1773 SAQKKLVNDLKSKCKMEVNEMLLKVILGGGTDNFKGEACVAQLSLRNGCYVGRGGYLYEE 1832

Query: 230  ESC--PNKKLNISSFTCAQAKSLSGFLHQLISEATYKLEAE--FIERRPVIMVLDSDVQM 63
            +SC  P    NIS       +S      +LI +A  KL  +     R P+I+VLD +VQM
Sbjct: 1833 DSCKTPTAASNIS-------ESRHELALKLIHDAASKLGQQDGHENREPIILVLDPEVQM 1885

Query: 62   LPWENLPVLRKEEVYRMPSV 3
            LPWEN+P+LRK+EVYRMPSV
Sbjct: 1886 LPWENIPILRKQEVYRMPSV 1905


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