BLASTX nr result

ID: Coptis25_contig00006644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006644
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine...   192   6e-47
ref|XP_003527625.1| PREDICTED: probable LRR receptor-like serine...   183   2e-44
ref|XP_004148866.1| PREDICTED: probable LRR receptor-like serine...   182   3e-44
ref|XP_003603924.1| Receptor kinase [Medicago truncatula] gi|355...   180   2e-43
ref|NP_179220.2| putative LRR receptor-like serine/threonine-pro...   179   4e-43

>ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250-like [Vitis vinifera]
          Length = 908

 Score =  192 bits (487), Expect = 6e-47
 Identities = 114/257 (44%), Positives = 139/257 (54%), Gaps = 48/257 (18%)
 Frame = +3

Query: 3   WIGIQCSTTGRVIGINVSGLRRTRLGRINPQFNVTPLSNFTMLSSFNASGFRLPGSIPEW 182
           W G+QC   G V+GI++SG RRTRLG  NP+F V  L+N T+L SFNAS F LPGSIP+W
Sbjct: 66  WRGVQCRN-GSVVGIDISGFRRTRLGSRNPEFAVDALANLTLLESFNASMFLLPGSIPDW 124

Query: 183 FGAQLVSLQLLDLRSCSIFGSVPFSLGNLTSLSQLYLGSNNLTGTIPSSLGQLFRLSVLD 362
           FG +L SL++LDLRSCSI G +P SLGNL++L+ L+L  NNLTG IPSSLGQL  LSVLD
Sbjct: 125 FGERLSSLKVLDLRSCSIIGPIPSSLGNLSNLNALFLSYNNLTGIIPSSLGQLSHLSVLD 184

Query: 363 LSQN------------------------------------------------SLSGSVPA 398
           LSQN                                                SLS S+PA
Sbjct: 185 LSQNRFTGSIPSSFGSFRNLSVLNISVNFLSDTIPPGIGNISSLQYLNLSGNSLSSSIPA 244

Query: 399 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMVIGNNSLSDVLPGNLFANLTQLEFV 578
           +                               ++M I  NSL+  LPGNLF  L+QL+ V
Sbjct: 245 QLGDLDNLVELDLSFNSLSGSLPADFRGLKNLQKMAIRKNSLAGSLPGNLFPALSQLQLV 304

Query: 579 VLSHNLLSGTLPDVLWS 629
           VLS N  +G LPDVLW+
Sbjct: 305 VLSQNAFTGNLPDVLWT 321


>ref|XP_003527625.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250-like [Glycine max]
          Length = 898

 Score =  183 bits (465), Expect = 2e-44
 Identities = 105/233 (45%), Positives = 133/233 (57%), Gaps = 24/233 (10%)
 Frame = +3

Query: 3   WIGIQCSTTGRVIGINVSGLRRTRLGRINPQFNVTPLSNFTMLSSFNASGFRLPGSIPEW 182
           W+GI C   GRV+GIN+SG RRTRLGR NPQF V  L+NFT+L SFNAS F LPGSIP+W
Sbjct: 57  WVGITCQN-GRVVGINISGFRRTRLGRRNPQFAVDALANFTLLRSFNASNFPLPGSIPDW 115

Query: 183 FGAQLVSLQLLDLRSCSIFGSVPFSLGNLTSLSQLYLGSNNLTGTIPSSLGQLFRLSVLD 362
           FG  L SL +LDLRSCSI  ++P +LGNLT+L+ LYL  NNL G +P +LGQL  LSVLD
Sbjct: 116 FGLSLPSLTVLDLRSCSIVDAIPSTLGNLTNLTSLYLSDNNLIGNVPGTLGQLLALSVLD 175

Query: 363 LSQNSLSGSVPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMVIGNNSLSDVLPG 542
           LS+NSL+GS+PA                                + + + NN LS  LP 
Sbjct: 176 LSRNSLTGSIPASFAFLGNLSSLDMSANFLSGAIPTGIGTLSRLQYLNLSNNGLSS-LPA 234

Query: 543 NL------------------------FANLTQLEFVVLSHNLLSGTLPDVLWS 629
            L                        F  L  L  ++L++++L+G LP  L+S
Sbjct: 235 ELGGLASLVDLDLSENSFVGGGLPPDFTRLRNLRRMILANSMLTGALPGRLFS 287


>ref|XP_004148866.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At2g16250-like [Cucumis sativus]
           gi|449507355|ref|XP_004163008.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At2g16250-like [Cucumis sativus]
          Length = 896

 Score =  182 bits (463), Expect = 3e-44
 Identities = 101/209 (48%), Positives = 131/209 (62%)
 Frame = +3

Query: 3   WIGIQCSTTGRVIGINVSGLRRTRLGRINPQFNVTPLSNFTMLSSFNASGFRLPGSIPEW 182
           W GI+C   GRV+GINVSG RRTRLG ++PQF V  L+N T+L SFNAS F LPG IP+W
Sbjct: 58  WRGIECQN-GRVVGINVSGFRRTRLGSLHPQFVVDALANLTLLQSFNASNFLLPGVIPDW 116

Query: 183 FGAQLVSLQLLDLRSCSIFGSVPFSLGNLTSLSQLYLGSNNLTGTIPSSLGQLFRLSVLD 362
            G+ L SLQ+LDLRSCSI GS+P S GNLT+L+ LYL +N L GTIP+S+GQL +LSVLD
Sbjct: 117 VGSTLKSLQVLDLRSCSILGSIPLSFGNLTNLTALYLSNNKLNGTIPTSIGQLVQLSVLD 176

Query: 363 LSQNSLSGSVPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMVIGNNSLSDVLPG 542
           LS N L+GS+P                                 + + + +N+++  LP 
Sbjct: 177 LSHNELTGSIPLSFSSLANLSFLDLSSNGLDGSIPPLIGSIRQLQSLNLSSNNITSSLPA 236

Query: 543 NLFANLTQLEFVVLSHNLLSGTLPDVLWS 629
           +L  +L++L  + LS N  SG LP  L S
Sbjct: 237 SL-GDLSRLVDLDLSFNKFSGLLPTDLRS 264



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
 Frame = +3

Query: 21  STTGRVIGINVSGLRRTRL-GRINPQFNVTPLSNFTMLSSFNASGFRLPGSIPEWFGAQL 197
           ++ G+++ ++V  L    L G I   F     S+   LS  + S   L GSIP   G+ +
Sbjct: 164 TSIGQLVQLSVLDLSHNELTGSIPLSF-----SSLANLSFLDLSSNGLDGSIPPLIGS-I 217

Query: 198 VSLQLLDLRSCSIFGSVPFSLGNLTSLSQLYLGSNNLTGTIPSSLGQLFRLSVLDLSQNS 377
             LQ L+L S +I  S+P SLG+L+ L  L L  N  +G +P+ L  +  L  + +  N 
Sbjct: 218 RQLQSLNLSSNNITSSLPASLGDLSRLVDLDLSFNKFSGLLPTDLRSMSSLQRMVIGNNL 277

Query: 378 LSGSVPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMV-IGNNSLSDVLPGNLFA 554
           L GS+P +                                R++ I  N+ + +LP +  A
Sbjct: 278 LGGSLPEDLFPSLRQLQELTLNDNGFTGAVPDVLFLIPGLRLLDISGNNFTGMLPNSSLA 337

Query: 555 NLTQLEFVVLSHNLLSGTLPDVL 623
           + +    + +S N+  G+L  V+
Sbjct: 338 SNSTGGALNISRNMFYGSLMPVI 360


>ref|XP_003603924.1| Receptor kinase [Medicago truncatula] gi|355492972|gb|AES74175.1|
           Receptor kinase [Medicago truncatula]
          Length = 936

 Score =  180 bits (457), Expect = 2e-43
 Identities = 105/207 (50%), Positives = 127/207 (61%), Gaps = 1/207 (0%)
 Frame = +3

Query: 3   WIGIQCSTTGRVIGINVSGLRRTRLGRINPQFNVTPLSNFTMLSSFNASGFRLPGSIPEW 182
           WIGI C   GRV+GIN+SG RRTR+GR NPQF+V  L+NFT+L SFNASGF LPGSIP+ 
Sbjct: 62  WIGITCQN-GRVVGINISGFRRTRIGRRNPQFSVDALANFTLLQSFNASGFYLPGSIPDL 120

Query: 183 FGAQLVSLQLLDLRSCSIFGSVPFSLGNLTSLSQLYLGSNNLTGTIPSSLGQLFRLSVLD 362
           FG  L SL++LDLRSCSIF  +P ++GNLTSL+ LYL  NNLTG  P SLGQL  LSVLD
Sbjct: 121 FGVSLRSLRVLDLRSCSIFDVIPNTIGNLTSLTGLYLSDNNLTGNAPDSLGQLSALSVLD 180

Query: 363 LSQNSLSGSVPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMVIGNNSLSDVLPG 542
           LS NSL+G++P                                 + + +  N L+  LP 
Sbjct: 181 LSGNSLTGNIPESFGSLANLSSLDLSGNFFSGSIPLGIGTLSRLQHLNLSGNGLNS-LPA 239

Query: 543 NLFANLTQLEFVVLSHNLLS-GTLPDV 620
            L   LT L  + LS N  S G LPD+
Sbjct: 240 QL-GGLTSLVDLDLSENSFSGGVLPDL 265


>ref|NP_179220.2| putative LRR receptor-like serine/threonine-protein kinase
           [Arabidopsis thaliana]
           gi|264664473|sp|C0LGK4.1|Y2165_ARATH RecName:
           Full=Probable LRR receptor-like serine/threonine-protein
           kinase At2g16250; Flags: Precursor
           gi|224589511|gb|ACN59289.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|330251384|gb|AEC06478.1| putative LRR receptor-like
           serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 915

 Score =  179 bits (454), Expect = 4e-43
 Identities = 107/257 (41%), Positives = 133/257 (51%), Gaps = 48/257 (18%)
 Frame = +3

Query: 3   WIGIQCSTTGRVIGINVSGLRRTRLGRINPQFNVTPLSNFTMLSSFNASGFRLPGSIPEW 182
           W GIQC   G +IGIN+SG RRTR+G++NPQF+V PL N T LS FNASG  LPG+IPEW
Sbjct: 64  WRGIQCEN-GSIIGINISGFRRTRIGKLNPQFSVDPLRNLTRLSYFNASGLALPGTIPEW 122

Query: 183 FGAQLVSLQLLDLRSCSIFGSVPFSLGNLTSLSQLYLGSNNLTGTIPSSLGQLFRLSVLD 362
           FG  L++L++LDL SCS+ G VPF+LGNLTSL  L L  N+LT  +PSSLGQL  LS LD
Sbjct: 123 FGVSLLALEVLDLSSCSVNGVVPFTLGNLTSLRTLNLSQNSLTSLVPSSLGQLLNLSQLD 182

Query: 363 LSQ------------------------------------------------NSLSGSVPA 398
           LS+                                                NS S  +P+
Sbjct: 183 LSRNSFTGVLPQSFSSLKNLLTLDVSSNYLTGPIPPGLGALSKLIHLNFSSNSFSSPIPS 242

Query: 399 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRMVIGNNSLSDVLPGNLFANLTQLEFV 578
           E                               + M IG+N LS  LP +LF+  +QL+ +
Sbjct: 243 ELGDLVNLVDFDLSINSLSGSVPQELRKLSKLQLMAIGDNLLSGTLPVDLFSAESQLQTL 302

Query: 579 VLSHNLLSGTLPDVLWS 629
           VL  N  SG+LPDV WS
Sbjct: 303 VLRENGFSGSLPDVCWS 319


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