BLASTX nr result

ID: Coptis25_contig00006641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006641
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]      669   0.0  
ref|XP_002330832.1| predicted protein [Populus trichocarpa] gi|2...   654   0.0  
emb|CBI20808.3| unnamed protein product [Vitis vinifera]              649   0.0  
ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    644   0.0  
gb|ACU24061.1| unknown [Glycine max]                                  644   0.0  

>ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
          Length = 436

 Score =  669 bits (1725), Expect = 0.0
 Identities = 326/412 (79%), Positives = 358/412 (86%)
 Frame = -3

Query: 1428 MYHHPVIAAAAMSQIEPVPSGNLPPGFDPSSCRSVYVGNIHVNVSETLLAEVFQSTGPLE 1249
            MYH  V+AAAAMSQ+EPVPSGNLPPGFD SSCRSVYVGNIHVNV+E LLAEVFQS GPL 
Sbjct: 26   MYHPGVLAAAAMSQMEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLA 85

Query: 1248 GCKLIRKDKSSFGFIDYHDRRSAALAIMTLHGRQLYGQAIKVNWAYASGQREDTTAHFNI 1069
            GCKLIRKDKSS+GF+DY DR SA+LAIMTLHGRQ+YGQA+KVNWAYASGQREDT+ HFNI
Sbjct: 86   GCKLIRKDKSSYGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNI 145

Query: 1068 FVGDLSPEVTDATLYACFSVYPSCSDARVMWDHKTGRSRGFGFVSFRNQQDAQSAINDLT 889
            FVGDLSPEVTDATLYACFSV+ SCSDARVMWDHKTGRS+G+GFVSFRNQQDAQSAINDL+
Sbjct: 146  FVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLS 205

Query: 888  GKWLGNRQIRCNWASKGAAGNEDKQGSDSQNAVILTNGTADGAQDNTNMEAPENNPTYTT 709
            GKWLGNRQIRCNWA+KGA  NEDKQ +++QNAV+LTNG++DG+Q+NTN EAPENNP YTT
Sbjct: 206  GKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTT 265

Query: 708  VYVGNLAHEVTQVELHRQFHSLGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQLANGRI 529
            VYVGNL+HEVTQ ELH QFH+LGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQ+ANGRI
Sbjct: 266  VYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRI 325

Query: 528  VCGKSMKCSWGSKPTPAGTASNPLPPPVPSYQILAGPGMNQGYSAAELLAYQRQLSLNQV 349
            V GKSMKCSWGSKPTP GTASNPLPPP   YQIL   G+NQGYS AELLAYQRQL+L+Q 
Sbjct: 326  VRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQA 385

Query: 348  AGSGLSGQSLLQMVXXXXXXXXXXXXXXXXXXXQNMYSAYPNSTSNQQLMYY 193
            A S LSGQ+L+QM                      MY  YPN++S QQLMYY
Sbjct: 386  AASSLSGQALMQMTGHHGLAAGSMGVSSGGTQA--MYDGYPNNSSGQQLMYY 435


>ref|XP_002330832.1| predicted protein [Populus trichocarpa] gi|222872634|gb|EEF09765.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  654 bits (1687), Expect = 0.0
 Identities = 312/412 (75%), Positives = 351/412 (85%), Gaps = 1/412 (0%)
 Frame = -3

Query: 1425 YHHPVIAAAAMSQIEPVPSGNLPPGFDPSSCRSVYVGNIHVNVSETLLAEVFQSTGPLEG 1246
            +HHP + AAAMSQ+EP+P GNLPPGFD SSCRSVYVGNIHVNV++ LLAEVF + GPL G
Sbjct: 5    HHHPALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAG 64

Query: 1245 CKLIRKDKSSFGFIDYHDRRSAALAIMTLHGRQLYGQAIKVNWAYASGQREDTTAHFNIF 1066
            CKLIRKDKSS+GF+DYHDR SAALAIMTLHGRQLYG+A+KVNWAYASGQREDT+ HF+IF
Sbjct: 65   CKLIRKDKSSYGFVDYHDRSSAALAIMTLHGRQLYGEALKVNWAYASGQREDTSGHFHIF 124

Query: 1065 VGDLSPEVTDATLYACFSVYPSCSDARVMWDHKTGRSRGFGFVSFRNQQDAQSAINDLTG 886
            VGDLSPEVTDATLYACFSV+PSCSDARVMWDHKTGRS+G+GFVSFRNQQ+AQSAINDLTG
Sbjct: 125  VGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTG 184

Query: 885  KWLGNRQIRCNWASKGAAGNEDKQGSDSQNAVILTNGTADGAQDNTNMEAPENNPTYTTV 706
            KWLGNRQIRCNWA+KG   NEDKQ SD+QNAV+LTNG++ G+Q+NTN EAPENNP YTTV
Sbjct: 185  KWLGNRQIRCNWATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPAYTTV 244

Query: 705  YVGNLAHEVTQVELHRQFHSLGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQLANGRIV 526
            YVGNL+H VTQ ELH  FH+LGAGVIEEVR+QRDKGFGFVRY+THEEAA AIQ+ NG+IV
Sbjct: 245  YVGNLSHVVTQAELHGNFHALGAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGNGKIV 304

Query: 525  CGKSMKCSWGSKPTPAGTASNPLPPPVPSYQILAGPGMNQGYSAAELLAYQRQLSLNQVA 346
            CGK MKCSWGSKPTP GTASNPLPPP   YQI    G+NQGYSAA+LLAYQRQL+L+Q A
Sbjct: 305  CGKPMKCSWGSKPTPPGTASNPLPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQAA 364

Query: 345  GSGLSGQSLLQMVXXXXXXXXXXXXXXXXXXXQNMYSAYPNS-TSNQQLMYY 193
             SGLSGQ+L+Q+                      +Y  YPNS  + QQLMYY
Sbjct: 365  ASGLSGQALVQLTGQHGLSAASMGLSSSGSQA--LYDGYPNSLAAAQQLMYY 414


>emb|CBI20808.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  649 bits (1673), Expect = 0.0
 Identities = 315/398 (79%), Positives = 346/398 (86%)
 Frame = -3

Query: 1386 IEPVPSGNLPPGFDPSSCRSVYVGNIHVNVSETLLAEVFQSTGPLEGCKLIRKDKSSFGF 1207
            +EPVPSGNLPPGFD SSCRSVYVGNIHVNV+E LLAEVFQS GPL GCKLIRKDKSS+GF
Sbjct: 1    MEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGF 60

Query: 1206 IDYHDRRSAALAIMTLHGRQLYGQAIKVNWAYASGQREDTTAHFNIFVGDLSPEVTDATL 1027
            +DY DR SA+LAIMTLHGRQ+YGQA+KVNWAYASGQREDT+ HFNIFVGDLSPEVTDATL
Sbjct: 61   VDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 120

Query: 1026 YACFSVYPSCSDARVMWDHKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGNRQIRCNWA 847
            YACFSV+ SCSDARVMWDHKTGRS+G+GFVSFRNQQDAQSAINDL+GKWLGNRQIRCNWA
Sbjct: 121  YACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWA 180

Query: 846  SKGAAGNEDKQGSDSQNAVILTNGTADGAQDNTNMEAPENNPTYTTVYVGNLAHEVTQVE 667
            +KGA  NEDKQ +++QNAV+LTNG++DG+Q+NTN EAPENNP YTTVYVGNL+HEVTQ E
Sbjct: 181  TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 240

Query: 666  LHRQFHSLGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQLANGRIVCGKSMKCSWGSKP 487
            LH QFH+LGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQ+ANGRIV GKSMKCSWGSKP
Sbjct: 241  LHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKP 300

Query: 486  TPAGTASNPLPPPVPSYQILAGPGMNQGYSAAELLAYQRQLSLNQVAGSGLSGQSLLQMV 307
            TP GTASNPLPPP   YQIL   G+NQGYS AELLAYQRQL+L+Q A S LSGQ+L+QM 
Sbjct: 301  TPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQAAASSLSGQALMQMT 360

Query: 306  XXXXXXXXXXXXXXXXXXXQNMYSAYPNSTSNQQLMYY 193
                                 MY  YPN++S QQLMYY
Sbjct: 361  GHHGLAAGSMGVSSGGTQA--MYDGYPNNSSGQQLMYY 396


>ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 435

 Score =  644 bits (1662), Expect = 0.0
 Identities = 311/411 (75%), Positives = 352/411 (85%), Gaps = 1/411 (0%)
 Frame = -3

Query: 1422 HHPVIAAAAMSQIEPVPSGNLPPGFDPSSCRSVYVGNIHVNVSETLLAEVFQSTGPLEGC 1243
            +HP + AAAMSQ+EPVPSGNLPPGFD S+CRSVYVGNIHVNV++ LLAEVFQS GPL GC
Sbjct: 26   YHPGMLAAAMSQMEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 85

Query: 1242 KLIRKDKSSFGFIDYHDRRSAALAIMTLHGRQLYGQAIKVNWAYASGQREDTTAHFNIFV 1063
            KLIRK+KSS+GF+DYHDR SAALAIMTLHGRQLYGQA+KVNWAYA+  REDTT HFNIFV
Sbjct: 86   KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTTGHFNIFV 145

Query: 1062 GDLSPEVTDATLYACFSVYPSCSDARVMWDHKTGRSRGFGFVSFRNQQDAQSAINDLTGK 883
            GDLSPEVTDATL+ACFSVYPSCSDARVMWDHKTGRS+G+GFVSFR+ QDAQSAIND+TGK
Sbjct: 146  GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 205

Query: 882  WLGNRQIRCNWASKGAAG-NEDKQGSDSQNAVILTNGTADGAQDNTNMEAPENNPTYTTV 706
            WLGNRQIRCNWA+KGA G + +++ +DSQNAV+LTNG++DG QDN N +APENNP+YTTV
Sbjct: 206  WLGNRQIRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTV 265

Query: 705  YVGNLAHEVTQVELHRQFHSLGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQLANGRIV 526
            YVGNL H+VTQ ELH QFH+LGAGVIEEVR+QRDKGFGF+RY+TH+EAALAIQ+ANGR+V
Sbjct: 266  YVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLV 325

Query: 525  CGKSMKCSWGSKPTPAGTASNPLPPPVPSYQILAGPGMNQGYSAAELLAYQRQLSLNQVA 346
             GK+MKCSWGSKPTP GTASNPLPPP   YQIL   GMNQGYS AELLAYQRQL+L+Q A
Sbjct: 326  RGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAA 385

Query: 345  GSGLSGQSLLQMVXXXXXXXXXXXXXXXXXXXQNMYSAYPNSTSNQQLMYY 193
             SGLSGQ+LLQM                      MY  Y  ++S QQLMYY
Sbjct: 386  VSGLSGQALLQMTGQHGLAPASMGINSGASQA--MYDGYTGNSSRQQLMYY 434


>gb|ACU24061.1| unknown [Glycine max]
          Length = 435

 Score =  644 bits (1660), Expect = 0.0
 Identities = 310/411 (75%), Positives = 351/411 (85%), Gaps = 1/411 (0%)
 Frame = -3

Query: 1422 HHPVIAAAAMSQIEPVPSGNLPPGFDPSSCRSVYVGNIHVNVSETLLAEVFQSTGPLEGC 1243
            +HP + AAAMSQ+EPVPSGNLPPGFD S+CRSVYVGNIHVNV++ LLAEVFQS GPL GC
Sbjct: 26   YHPGMLAAAMSQVEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 85

Query: 1242 KLIRKDKSSFGFIDYHDRRSAALAIMTLHGRQLYGQAIKVNWAYASGQREDTTAHFNIFV 1063
            KLIRK+KSS+GF+DYHDR SAALAIMTLHGRQLYGQA+KVNWAYA+  REDTT HFNIFV
Sbjct: 86   KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTTGHFNIFV 145

Query: 1062 GDLSPEVTDATLYACFSVYPSCSDARVMWDHKTGRSRGFGFVSFRNQQDAQSAINDLTGK 883
            GDLSPEVTDATL+ACFSVYPSCSDARVMWDHKTGRS+G+GFVSFR+ QDAQSAIND+TGK
Sbjct: 146  GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 205

Query: 882  WLGNRQIRCNWASKGAAG-NEDKQGSDSQNAVILTNGTADGAQDNTNMEAPENNPTYTTV 706
            WLGNRQIRCNWA+KGA G + +++ +DSQNAV+LTNG++DG QDN N +APENNP+YTTV
Sbjct: 206  WLGNRQIRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTV 265

Query: 705  YVGNLAHEVTQVELHRQFHSLGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQLANGRIV 526
            YVGNL H+VTQ ELH QFH+LGAGVIEEVR+QRDKGFGF+RY+TH+EAALAIQ+ANGR+V
Sbjct: 266  YVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLV 325

Query: 525  CGKSMKCSWGSKPTPAGTASNPLPPPVPSYQILAGPGMNQGYSAAELLAYQRQLSLNQVA 346
             GK+MKCSWGSKPTP GTASNPLPPP   YQIL   GMNQGYS AELLAYQRQL+L+Q A
Sbjct: 326  RGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAA 385

Query: 345  GSGLSGQSLLQMVXXXXXXXXXXXXXXXXXXXQNMYSAYPNSTSNQQLMYY 193
             SGLSGQ+ LQM                      MY  Y  ++S QQLMYY
Sbjct: 386  VSGLSGQAFLQMTGQHGLAPASMGINFGASQA--MYDGYTGNSSRQQLMYY 434