BLASTX nr result

ID: Coptis25_contig00006640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006640
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37021.1| unknown [Medicago truncatula]                          104   9e-21
ref|XP_003540867.1| PREDICTED: amino acid permease 2-like [Glyci...    95   5e-18
ref|XP_002278086.1| PREDICTED: amino acid permease 2 [Vitis vini...    94   1e-17
gb|AAK33098.1| amino acid transporter [Glycine max]                    94   2e-17
ref|XP_003538987.1| PREDICTED: LOW QUALITY PROTEIN: amino acid p...    94   2e-17

>gb|AFK37021.1| unknown [Medicago truncatula]
          Length = 512

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/68 (72%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 MLPRSRTLPPRIHHPTIEENRDTRHYLQVEVQPKLQTETQPI-IQPVYSKCYDDDGRLKR 27
           MLPRSRTLP R  H  IEE  D RHYL+VE QPK+QTET+ + I+P YSKC+DDDGRLKR
Sbjct: 1   MLPRSRTLPSRFQHGVIEERYDFRHYLEVEAQPKIQTETESVSIEPNYSKCFDDDGRLKR 60

Query: 26  TGTVWTAT 3
           TGT WTAT
Sbjct: 61  TGTFWTAT 68


>ref|XP_003540867.1| PREDICTED: amino acid permease 2-like [Glycine max]
          Length = 513

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/69 (71%), Positives = 54/69 (78%), Gaps = 2/69 (2%)
 Frame = -2

Query: 203 MLPRSRTLPPRIHHPTIEENRDTRHYLQVEVQP-KLQTETQPI-IQPVYSKCYDDDGRLK 30
           MLPRSRTLP RIH   IEE  D R Y+QVEV+P  +QTETQ + IQ  YSKC+DDDGRLK
Sbjct: 1   MLPRSRTLPSRIHQGIIEERHDVRPYVQVEVRPNNIQTETQAMNIQSNYSKCFDDDGRLK 60

Query: 29  RTGTVWTAT 3
           RTGT WTAT
Sbjct: 61  RTGTFWTAT 69


>ref|XP_002278086.1| PREDICTED: amino acid permease 2 [Vitis vinifera]
           gi|297744622|emb|CBI37884.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 MLPRSRTLPPRIHHPTIEENRDTRHYLQVEVQPKLQTETQPI-IQPVYSKCYDDDGRLKR 27
           MLPRSRTLP RI++  +EE +D RHYLQVEVQPK   E++ I  Q  YSKC+DDDGRLKR
Sbjct: 1   MLPRSRTLPSRIYNGVVEERQDIRHYLQVEVQPKPHGESEAINPQANYSKCFDDDGRLKR 60

Query: 26  TGTVWTAT 3
           TGT WTA+
Sbjct: 61  TGTFWTAS 68


>gb|AAK33098.1| amino acid transporter [Glycine max]
          Length = 513

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/69 (69%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
 Frame = -2

Query: 203 MLPRSRTLPPRIHHPTIEENRDTRHYLQVEVQP-KLQTETQPI-IQPVYSKCYDDDGRLK 30
           MLPRSRTLP RIH   IEE  + RHYLQVEV+P   QTET+ + IQ  YSKC+DDDGRLK
Sbjct: 1   MLPRSRTLPSRIHQGIIEERHNVRHYLQVEVRPNNTQTETEAMNIQSNYSKCFDDDGRLK 60

Query: 29  RTGTVWTAT 3
           RTGT W AT
Sbjct: 61  RTGTFWMAT 69


>ref|XP_003538987.1| PREDICTED: LOW QUALITY PROTEIN: amino acid permease 2-like [Glycine
           max]
          Length = 628

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/69 (69%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
 Frame = -2

Query: 203 MLPRSRTLPPRIHHPTIEENRDTRHYLQVEVQP-KLQTETQPI-IQPVYSKCYDDDGRLK 30
           MLPRSRTLP RIH   IEE  + RHYLQVEV+P   QTET+ + IQ  YSKC+DDDGRLK
Sbjct: 116 MLPRSRTLPSRIHQGIIEERHNVRHYLQVEVRPNNTQTETEAMNIQSNYSKCFDDDGRLK 175

Query: 29  RTGTVWTAT 3
           RTGT W AT
Sbjct: 176 RTGTFWMAT 184


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