BLASTX nr result

ID: Coptis25_contig00006638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006638
         (1663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324510.1| predicted protein [Populus trichocarpa] gi|2...   763   0.0  
ref|XP_002528222.1| UDP-glucuronate 5-epimerase, putative [Ricin...   759   0.0  
gb|ACJ11754.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirs...   759   0.0  
ref|XP_003549520.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   759   0.0  
ref|XP_004162690.1| PREDICTED: UDP-glucuronate 4-epimerase 1-lik...   757   0.0  

>ref|XP_002324510.1| predicted protein [Populus trichocarpa] gi|222865944|gb|EEF03075.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  763 bits (1969), Expect = 0.0
 Identities = 374/431 (86%), Positives = 397/431 (92%), Gaps = 1/431 (0%)
 Frame = +2

Query: 116  MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 295
            M SLE+ELFPSTPGK KI+R + +NRQF RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEEELFPSTPGKFKIDRAHNMNRQFNRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 296  SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 475
            SGS+Y TASWGGIQWEKQ+RNSA I R  G SVLVTG+AGFVG+HVSLALKKRGDGVVG+
Sbjct: 61   SGSRYFTASWGGIQWEKQIRNSAQIHRSKGMSVLVTGAAGFVGSHVSLALKKRGDGVVGI 120

Query: 476  DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 655
            DNFNNYYDPSLKKARK+LLNN G+FIVEGD+NDARL++KLFDIVAFTHVMHLAAQAGVRY
Sbjct: 121  DNFNNYYDPSLKKARKSLLNNQGIFIVEGDINDARLIAKLFDIVAFTHVMHLAAQAGVRY 180

Query: 656  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 835
            AMENP SYVHSNIAGLVTLLEACK ANPQPSVVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPHSYVHSNIAGLVTLLEACKLANPQPSVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 836  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 1015
            LYAATKKAGEEITHTYNHIYGLS+TGLRFFTVYGP+GRPDMAYFSFTRNILQGKPITVYR
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSVTGLRFFTVYGPFGRPDMAYFSFTRNILQGKPITVYR 300

Query: 1016 GKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPTL 1195
            GKNRVDLARDFTYIDDIVKGC+GSLD            RGPAPYRIFNLGNTSPVTVPTL
Sbjct: 301  GKNRVDLARDFTYIDDIVKGCVGSLDTSGKSTGSGGKKRGPAPYRIFNLGNTSPVTVPTL 360

Query: 1196 VSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASKEFGYKPTTDLQTGLKKFVKWYLN 1375
            V+ILERHLKVKAK+N +DMPGNGDVPFTHANISLA +E GYKPTTDL+TGLKKFVKWYL 
Sbjct: 361  VNILERHLKVKAKRNIVDMPGNGDVPFTHANISLAQRELGYKPTTDLETGLKKFVKWYLT 420

Query: 1376 YYGYN-GKTVN 1405
            YYGYN GK V+
Sbjct: 421  YYGYNRGKAVH 431


>ref|XP_002528222.1| UDP-glucuronate 5-epimerase, putative [Ricinus communis]
            gi|223532383|gb|EEF34179.1| UDP-glucuronate 5-epimerase,
            putative [Ricinus communis]
          Length = 433

 Score =  759 bits (1961), Expect = 0.0
 Identities = 375/433 (86%), Positives = 400/433 (92%), Gaps = 3/433 (0%)
 Frame = +2

Query: 116  MRSLEDELFPSTPGKVKIERT-NMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFV 292
            M SLE+ELFPSTPGK KI+R  + +NRQFYRCF STSTMFLWALFLIALTASYLSFQSF+
Sbjct: 1    MPSLEEELFPSTPGKFKIDRGGHTMNRQFYRCFTSTSTMFLWALFLIALTASYLSFQSFI 60

Query: 293  DSGSKYLTASWGGIQWEKQVRNSAIIQRQHG-FSVLVTGSAGFVGTHVSLALKKRGDGVV 469
            DSGSKY +ASWGG+QWEKQVRNSA I R  G  SVLVTG+AGFVGTHVSLALKKRGDGVV
Sbjct: 61   DSGSKYFSASWGGLQWEKQVRNSAQIHRPSGGVSVLVTGAAGFVGTHVSLALKKRGDGVV 120

Query: 470  GLDNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGV 649
            GLDNFNNYYDPSLKKARK+LLN+HGVFIVEGD+NDARLL+KLFD+VAF+HVMHLAAQAGV
Sbjct: 121  GLDNFNNYYDPSLKKARKSLLNSHGVFIVEGDVNDARLLAKLFDVVAFSHVMHLAAQAGV 180

Query: 650  RYAMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQP 829
            RYAMENP SYVHSNIAGLVTLLEACKSANPQP++VWASSSSVYGLN+K PFSE DRTDQP
Sbjct: 181  RYAMENPHSYVHSNIAGLVTLLEACKSANPQPAIVWASSSSVYGLNDKVPFSESDRTDQP 240

Query: 830  ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITV 1009
            ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITV
Sbjct: 241  ASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITV 300

Query: 1010 YRGKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVP 1189
            YRGKNRVDLARDFTYIDDIVKGC+GSLD            RGPAPYRIFNLGNTSPVTVP
Sbjct: 301  YRGKNRVDLARDFTYIDDIVKGCVGSLDTAGKSTGSGGKKRGPAPYRIFNLGNTSPVTVP 360

Query: 1190 TLVSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASKEFGYKPTTDLQTGLKKFVKWY 1369
            TLVSILE+HLK+KAK+N +DMPGNGDVPFTHANISLA +E GYKPTTDLQTGLKKFV+WY
Sbjct: 361  TLVSILEKHLKMKAKRNVVDMPGNGDVPFTHANISLARRELGYKPTTDLQTGLKKFVRWY 420

Query: 1370 LNYYGYN-GKTVN 1405
            L+YYGYN GK VN
Sbjct: 421  LSYYGYNHGKAVN 433


>gb|ACJ11754.1| UDP-D-glucuronic acid 4-epimerase [Gossypium hirsutum]
          Length = 431

 Score =  759 bits (1960), Expect = 0.0
 Identities = 367/427 (85%), Positives = 393/427 (92%)
 Frame = +2

Query: 116  MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 295
            M SLEDELFPSTPGK K++R + +NRQF+RCFASTSTMFLWALFLIALTASYL FQSFVD
Sbjct: 1    MPSLEDELFPSTPGKFKVDRAHNMNRQFHRCFASTSTMFLWALFLIALTASYLRFQSFVD 60

Query: 296  SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 475
            SGS+Y +ASWGGIQWEKQVRNSA I R  G SVLVTG+AGFVGTHVSLALKKRGDGVVGL
Sbjct: 61   SGSRYFSASWGGIQWEKQVRNSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL 120

Query: 476  DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 655
            DNFNNYYDPSLKKARK+LLN+HG+ +VEGDLNDA+LL+KLFD+VAFTHVMHLAAQAGVRY
Sbjct: 121  DNFNNYYDPSLKKARKSLLNSHGILVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 180

Query: 656  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 835
            AMENP SYVHSNIAGLVTLLE CKSANPQP+VVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPNSYVHSNIAGLVTLLEICKSANPQPAVVWASSSSVYGLNEKVPFSEADRTDQPAS 240

Query: 836  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 1015
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT+YR
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYR 300

Query: 1016 GKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPTL 1195
            GKNRVDLARDFTYIDDIVKGCLGSLD            +G APYRIFNLGNTSPV VP L
Sbjct: 301  GKNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKKGNAPYRIFNLGNTSPVKVPEL 360

Query: 1196 VSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASKEFGYKPTTDLQTGLKKFVKWYLN 1375
            V+ILERHLKVKAK+N +DMPGNGDVPFTHANISLA +EFGYKP+TDLQTGLKKFV+WYL+
Sbjct: 361  VNILERHLKVKAKRNIVDMPGNGDVPFTHANISLAQREFGYKPSTDLQTGLKKFVRWYLS 420

Query: 1376 YYGYNGK 1396
            YYGYN +
Sbjct: 421  YYGYNNR 427


>ref|XP_003549520.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Glycine max]
          Length = 431

 Score =  759 bits (1959), Expect = 0.0
 Identities = 373/431 (86%), Positives = 396/431 (91%), Gaps = 1/431 (0%)
 Frame = +2

Query: 116  MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 295
            M SLE+ELFPSTPGK KIER++ +NRQ YRCFASTSTMFLWALFLIALTASYLSFQ FVD
Sbjct: 1    MPSLEEELFPSTPGKFKIERSHHMNRQLYRCFASTSTMFLWALFLIALTASYLSFQGFVD 60

Query: 296  SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 475
            SGS+YLTASWGGIQWEKQVR SA I RQ G SVLVTG+AGFVG+HVSLALK+RGDGVVGL
Sbjct: 61   SGSRYLTASWGGIQWEKQVRTSAQIHRQGGMSVLVTGAAGFVGSHVSLALKRRGDGVVGL 120

Query: 476  DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 655
            DNFN+YYDPSLKKARK+LL  H VFIVEGD+NDA+LL+KLFD+VAFTHVMHLAAQAGVRY
Sbjct: 121  DNFNDYYDPSLKKARKSLLATHDVFIVEGDVNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 180

Query: 656  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 835
            AMENP SYVHSNIAGLVTLLEACK+ANPQP++VWASSSSVYGLNEK PFSE D+TDQPAS
Sbjct: 181  AMENPHSYVHSNIAGLVTLLEACKTANPQPAIVWASSSSVYGLNEKVPFSESDQTDQPAS 240

Query: 836  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 1015
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 300

Query: 1016 GKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPTL 1195
            GKN VDLARDFTYIDDIVKGC+GSLD            RGPAPYRIFNLGNTSPVTVPTL
Sbjct: 301  GKNHVDLARDFTYIDDIVKGCVGSLDTSAKSTGSGGKKRGPAPYRIFNLGNTSPVTVPTL 360

Query: 1196 VSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASKEFGYKPTTDLQTGLKKFVKWYLN 1375
            VSILERHLKVKAK+N +DMPGNGDVPFTHANIS A +E GYKPTTDLQTGLKKFVKWYL+
Sbjct: 361  VSILERHLKVKAKRNIVDMPGNGDVPFTHANISSARRELGYKPTTDLQTGLKKFVKWYLS 420

Query: 1376 YYGYN-GKTVN 1405
            YYGYN GK VN
Sbjct: 421  YYGYNHGKPVN 431


>ref|XP_004162690.1| PREDICTED: UDP-glucuronate 4-epimerase 1-like [Cucumis sativus]
          Length = 431

 Score =  757 bits (1954), Expect = 0.0
 Identities = 372/431 (86%), Positives = 395/431 (91%), Gaps = 1/431 (0%)
 Frame = +2

Query: 116  MRSLEDELFPSTPGKVKIERTNMLNRQFYRCFASTSTMFLWALFLIALTASYLSFQSFVD 295
            M SLEDELFPSTPGK KI+R + +NRQF+RCFASTSTMFLWALFLIALTASYLSFQSFVD
Sbjct: 1    MPSLEDELFPSTPGKFKIDRNHPMNRQFHRCFASTSTMFLWALFLIALTASYLSFQSFVD 60

Query: 296  SGSKYLTASWGGIQWEKQVRNSAIIQRQHGFSVLVTGSAGFVGTHVSLALKKRGDGVVGL 475
            SGS+Y +ASWGGIQWEKQVR SA   R +GFSVLVTG+AGFVG+HVSLALKKRGDGVVGL
Sbjct: 61   SGSRYFSASWGGIQWEKQVRISAQPHRTNGFSVLVTGAAGFVGSHVSLALKKRGDGVVGL 120

Query: 476  DNFNNYYDPSLKKARKALLNNHGVFIVEGDLNDARLLSKLFDIVAFTHVMHLAAQAGVRY 655
            DNFN+YYDPSLKKARK+LL+NHG+FIV+GD+ND RLL KLFD+V FTHVMHLAAQAGVRY
Sbjct: 121  DNFNSYYDPSLKKARKSLLSNHGIFIVDGDINDVRLLDKLFDVVVFTHVMHLAAQAGVRY 180

Query: 656  AMENPGSYVHSNIAGLVTLLEACKSANPQPSVVWASSSSVYGLNEKQPFSELDRTDQPAS 835
            AMENP SYVHSNIAGLVTLLEACKSANPQP+VVWASSSSVYGLNEK PFSE DRTDQPAS
Sbjct: 181  AMENPNSYVHSNIAGLVTLLEACKSANPQPAVVWASSSSVYGLNEKVPFSESDRTDQPAS 240

Query: 836  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 1015
            LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITV+R
Sbjct: 241  LYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVFR 300

Query: 1016 GKNRVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPTL 1195
            GKNRVDLARDFTYIDDIVKGCLGSLD             G APYRIFNLGNTSPVTVPTL
Sbjct: 301  GKNRVDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKTGAAPYRIFNLGNTSPVTVPTL 360

Query: 1196 VSILERHLKVKAKKNFIDMPGNGDVPFTHANISLASKEFGYKPTTDLQTGLKKFVKWYLN 1375
            VSILERHLKVKAKKN ++MPGNGDVPFTHANIS A +E GYKPTTDLQTGLKKFV+WYL+
Sbjct: 361  VSILERHLKVKAKKNVVEMPGNGDVPFTHANISSARRELGYKPTTDLQTGLKKFVRWYLS 420

Query: 1376 YYGYN-GKTVN 1405
            YYGYN GK VN
Sbjct: 421  YYGYNHGKPVN 431


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