BLASTX nr result
ID: Coptis25_contig00006628
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006628
(1799 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631339.1| PREDICTED: S-adenosylmethionine decarboxylas... 531 e-148
emb|CAD98785.2| S-adenosylmethionine decarboxylase proenzyme [Vi... 488 e-135
emb|CAN66014.1| hypothetical protein VITISV_041154 [Vitis vinifera] 486 e-134
ref|XP_002282704.1| PREDICTED: S-adenosylmethionine decarboxylas... 485 e-134
sp|O80402.1|DCAM_NICSY RecName: Full=S-adenosylmethionine decarb... 482 e-133
>ref|XP_003631339.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Vitis
vinifera]
Length = 410
Score = 531 bits (1368), Expect = e-148
Identities = 279/428 (65%), Positives = 317/428 (74%), Gaps = 1/428 (0%)
Frame = +3
Query: 234 YEAPLGYSVEDVRPRGGIKKFRSAAYSNCARKPS*YXXXXXXXXXXXXSHFLSGXXXXXX 413
YEAPLGYS+ED+RP GGIKKFRSAAYSNCARKPS
Sbjct: 17 YEAPLGYSIEDIRPNGGIKKFRSAAYSNCARKPS-------------------------- 50
Query: 414 XXXXXXXXXXXXXXXXXEMALPMSAIGFEGFEKRLEISFFEPGLFADPQRRGLRSLSNTQ 593
MALP+SAIGFEG+EKRLEISF EPG+F+DP+ RGLRSLS Q
Sbjct: 51 ------------------MALPVSAIGFEGYEKRLEISFSEPGIFSDPEGRGLRSLSRAQ 92
Query: 594 LDEILNPAECTIVASLSNADLDSYVLSESSLFVFSYKIIIKTCGTTKLLLSIPHILRLAK 773
LDEIL PAEC IV SLSN +DSYVLSESSLFV+ YKIIIKTCGTTKLLLSIP IL+LA
Sbjct: 93 LDEILEPAECIIVGSLSNDIVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLAD 152
Query: 774 TLSLSVKAVKYTRGSFVFPGAQSYPHRSFSEEVSVLDSYFGNLGAGSRAYMMGPITRSQN 953
LSLSV V+YTRGSF FPGAQ YPHR FSEEV+VLDSYFG LG+GS+AY+MG +SQ
Sbjct: 153 ALSLSVSCVRYTRGSFNFPGAQPYPHRHFSEEVAVLDSYFGKLGSGSKAYVMGSSDKSQK 212
Query: 954 WHVYSSCAESMNHRETIYTLEMCMTGLDKNLASVFYKTQSSSAAQMTNVSGIRKILAQSE 1133
WHVYS+ AE + + +YTLEMCMTGLD+ +ASVFYKT SSSA +MT+ SGIRKIL SE
Sbjct: 213 WHVYSASAEVRSACDPVYTLEMCMTGLDREMASVFYKTHSSSAVKMTDTSGIRKILPDSE 272
Query: 1134 INDFEFDPCGYSMNAIEGSAISTIHVTPEDGFSYASFEAAGYDPKSVSLEELIERVLACF 1313
I DFEFDPCGYSMNAIEG+AISTIHVTPEDGFSYASFE GY+PK V+L +LIERVL+CF
Sbjct: 273 ICDFEFDPCGYSMNAIEGAAISTIHVTPEDGFSYASFETMGYNPKDVNLSQLIERVLSCF 332
Query: 1314 GPTEFSIAVHAEDANDKFQWDC-RDVMGYNHGGMSYQELEQGGAIVYRSFVKAEGCGSPR 1490
P EFS+AVHA+ + + +C DV GY S +EL G+IVY F+K EG SPR
Sbjct: 333 QPNEFSVAVHADISGKLLERNCLLDVKGYCCEERSNEELGMCGSIVYHRFMKTEGLVSPR 392
Query: 1491 SVLKDCCW 1514
S+LK CCW
Sbjct: 393 SILK-CCW 399
>emb|CAD98785.2| S-adenosylmethionine decarboxylase proenzyme [Vitis vinifera]
Length = 358
Score = 488 bits (1257), Expect = e-135
Identities = 249/350 (71%), Positives = 285/350 (81%), Gaps = 1/350 (0%)
Frame = +3
Query: 468 MALPMSAIGFEGFEKRLEISFFEPGLFADPQRRGLRSLSNTQLDEILNPAECTIVASLSN 647
MALP+SAIGFEG+EKRLEISF EPG+F+DP+ RGLRSLS QLDEIL PAECTIV SLSN
Sbjct: 1 MALPVSAIGFEGYEKRLEISFSEPGIFSDPEGRGLRSLSRAQLDEILEPAECTIVGSLSN 60
Query: 648 ADLDSYVLSESSLFVFSYKIIIKTCGTTKLLLSIPHILRLAKTLSLSVKAVKYTRGSFVF 827
+DSYVLSESSLFV+ YKIIIKTCGTTKLLLSIP IL+LA TLSLSV V+YTRGSF F
Sbjct: 61 DIVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLADTLSLSVSCVRYTRGSFNF 120
Query: 828 PGAQSYPHRSFSEEVSVLDSYFGNLGAGSRAYMMGPITRSQNWHVYSSCAESMNHRETIY 1007
PGAQ YPHR FSEEV+VLDSYFG LG+GS+AY+MG +SQ WHVYS+ AE + + +Y
Sbjct: 121 PGAQPYPHRHFSEEVAVLDSYFGKLGSGSKAYVMGSSDKSQKWHVYSASAEVRSACDPVY 180
Query: 1008 TLEMCMTGLDKNLASVFYKTQSSSAAQMTNVSGIRKILAQSEINDFEFDPCGYSMNAIEG 1187
TLEMCMTGLD+ +ASVFYKT SSSA +MT+ SGIRKIL SEI DFEFDPCGYSMNAIEG
Sbjct: 181 TLEMCMTGLDREMASVFYKTHSSSAVKMTDTSGIRKILPDSEICDFEFDPCGYSMNAIEG 240
Query: 1188 SAISTIHVTPEDGFSYASFEAAGYDPKSVSLEELIERVLACFGPTEFSIAVHAEDANDKF 1367
+AISTIHVTPEDGFSYASFE GY+PK V+L LIERVL+CF P EFS+AVHA+ +
Sbjct: 241 AAISTIHVTPEDGFSYASFETVGYNPKDVNLSHLIERVLSCFQPNEFSVAVHADISGKLL 300
Query: 1368 QWDC-RDVMGYNHGGMSYQELEQGGAIVYRSFVKAEGCGSPRSVLKDCCW 1514
+ +C DV GY S +EL G++VY F+K EG SPRS+LK CCW
Sbjct: 301 ERNCLLDVKGYCCEERSNEELGMCGSMVYHRFMKTEGLVSPRSILK-CCW 349
>emb|CAN66014.1| hypothetical protein VITISV_041154 [Vitis vinifera]
Length = 357
Score = 486 bits (1250), Expect = e-134
Identities = 248/348 (71%), Positives = 284/348 (81%), Gaps = 1/348 (0%)
Frame = +3
Query: 468 MALPMSAIGFEGFEKRLEISFFEPGLFADPQRRGLRSLSNTQLDEILNPAECTIVASLSN 647
MALP+SAIGFEG+EKRLEISF EPG+F+DP+ RGLRSLS QLDEIL PAECTIV SLSN
Sbjct: 1 MALPVSAIGFEGYEKRLEISFSEPGIFSDPEGRGLRSLSRAQLDEILEPAECTIVGSLSN 60
Query: 648 ADLDSYVLSESSLFVFSYKIIIKTCGTTKLLLSIPHILRLAKTLSLSVKAVKYTRGSFVF 827
+DSYVLSESSLFV+ YKIIIKTCGTTKLLLSIP IL+LA TLSLSV V+YTRGSF F
Sbjct: 61 DIVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLADTLSLSVSCVRYTRGSFNF 120
Query: 828 PGAQSYPHRSFSEEVSVLDSYFGNLGAGSRAYMMGPITRSQNWHVYSSCAESMNHRETIY 1007
PGAQ YPHR FSEEV+VLDSYFG LG+GS+AY+MG +SQ WHVYS+ AE + + +Y
Sbjct: 121 PGAQPYPHRHFSEEVAVLDSYFGKLGSGSKAYVMGSSDKSQKWHVYSASAEVRSACDPVY 180
Query: 1008 TLEMCMTGLDKNLASVFYKTQSSSAAQMTNVSGIRKILAQSEINDFEFDPCGYSMNAIEG 1187
TLEMCMTGLD+ +ASVFYKT SSSA +MT+ SGIRKIL SEI DFEFDPCGYSMNAIEG
Sbjct: 181 TLEMCMTGLDREMASVFYKTHSSSAVKMTDTSGIRKILPDSEICDFEFDPCGYSMNAIEG 240
Query: 1188 SAISTIHVTPEDGFSYASFEAAGYDPKSVSLEELIERVLACFGPTEFSIAVHAEDANDKF 1367
+AISTIHVTPEDGFSYASFE GY+PK V+L +LIERVL+CF P EFS+AVHA+ +
Sbjct: 241 AAISTIHVTPEDGFSYASFETMGYNPKDVNLSQLIERVLSCFQPNEFSVAVHADISGKLL 300
Query: 1368 QWDC-RDVMGYNHGGMSYQELEQGGAIVYRSFVKAEGCGSPRSVLKDC 1508
+ +C DV GY S +EL G+IVY F+K EG SPRS+LK C
Sbjct: 301 ERNCLLDVKGYCCEERSNEELGMCGSIVYHRFMKTEGVVSPRSILKCC 348
>ref|XP_002282704.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme isoform 1
[Vitis vinifera] gi|225451895|ref|XP_002282708.1|
PREDICTED: S-adenosylmethionine decarboxylase proenzyme
isoform 2 [Vitis vinifera]
gi|225451897|ref|XP_002282716.1| PREDICTED:
S-adenosylmethionine decarboxylase proenzyme isoform 3
[Vitis vinifera] gi|147841261|emb|CAN75613.1|
hypothetical protein VITISV_022291 [Vitis vinifera]
Length = 360
Score = 485 bits (1248), Expect = e-134
Identities = 245/346 (70%), Positives = 283/346 (81%), Gaps = 1/346 (0%)
Frame = +3
Query: 468 MALPMSAIGFEGFEKRLEISFFEPGLFADPQRRGLRSLSNTQLDEILNPAECTIVASLSN 647
MALP+SAIGFEG+EKRLEISFFEPG+FADP GLRSLS TQLDEIL PAECTIV+SLSN
Sbjct: 1 MALPVSAIGFEGYEKRLEISFFEPGIFADPVGMGLRSLSKTQLDEILEPAECTIVSSLSN 60
Query: 648 ADLDSYVLSESSLFVFSYKIIIKTCGTTKLLLSIPHILRLAKTLSLSVKAVKYTRGSFVF 827
D+DSYVLSESSLFV+ YKIIIKTCGTTKLLLSIP IL+LA +L LSV++VKYTRGSF+F
Sbjct: 61 DDVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLANSLDLSVRSVKYTRGSFIF 120
Query: 828 PGAQSYPHRSFSEEVSVLDSYFGNLGAGSRAYMMGPITRSQNWHVYSSCAESMNHRETIY 1007
PGAQS+PHR+FSEEV LD +FG LGAGS+AYMMG + Q WHVY++ AE + +Y
Sbjct: 121 PGAQSFPHRNFSEEVVELDGHFGKLGAGSKAYMMGSHDKPQKWHVYTAAAEFTGRLDPVY 180
Query: 1008 TLEMCMTGLDKNLASVFYKTQSSSAAQMTNVSGIRKILAQSEINDFEFDPCGYSMNAIEG 1187
TLEMCMTGLD+ ASVFYKT +SSAA MT SGIRKIL SEI DFEFDPCGYSMNAIE
Sbjct: 181 TLEMCMTGLDRKKASVFYKTDTSSAAVMTENSGIRKILPNSEICDFEFDPCGYSMNAIEE 240
Query: 1188 SAISTIHVTPEDGFSYASFEAAGYDPKSVSLEELIERVLACFGPTEFSIAVHAEDANDKF 1367
AISTIHVTPEDGFSYASFEA GY+ SL +++ERVL CF P FS+A+HA+ K
Sbjct: 241 DAISTIHVTPEDGFSYASFEAMGYNLNDDSLTQMLERVLDCFQPAHFSVALHADVEGKKL 300
Query: 1368 QWDC-RDVMGYNHGGMSYQELEQGGAIVYRSFVKAEGCGSPRSVLK 1502
++D DVMGY G SY+ L +GG+I+Y SF+K+E CGSPRS+LK
Sbjct: 301 EYDFPLDVMGYYCEGRSYEGLGKGGSIIYHSFMKSEECGSPRSILK 346
>sp|O80402.1|DCAM_NICSY RecName: Full=S-adenosylmethionine decarboxylase proenzyme;
Short=AdoMetDC; Short=SAMDC; Contains: RecName:
Full=S-adenosylmethionine decarboxylase alpha chain;
Contains: RecName: Full=S-adenosylmethionine
decarboxylase beta chain; Flags: Precursor
gi|3252792|dbj|BAA29040.1| S-adenosylmethionine
decarboxylase [Nicotiana sylvestris]
Length = 361
Score = 482 bits (1241), Expect = e-133
Identities = 243/349 (69%), Positives = 284/349 (81%), Gaps = 1/349 (0%)
Frame = +3
Query: 465 EMALPMSAIGFEGFEKRLEISFFEPGLFADPQRRGLRSLSNTQLDEILNPAECTIVASLS 644
+MALP+SAIGFEGFEKRLEISFFEPGLFADP +GLRSLS QLDEIL PAECTIV SLS
Sbjct: 2 DMALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLS 61
Query: 645 NADLDSYVLSESSLFVFSYKIIIKTCGTTKLLLSIPHILRLAKTLSLSVKAVKYTRGSFV 824
N D+DSYVLSESSLFV+SYKIIIKTCGTTKLLL+IP IL+LA+TLSL V+ V+YTRGSF+
Sbjct: 62 NDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFI 121
Query: 825 FPGAQSYPHRSFSEEVSVLDSYFGNLGAGSRAYMMGPITRSQNWHVYSSCAESMNHRETI 1004
FPGAQS+PHR FSEEV+VLD YFG L AGS+A +MG ++Q WHVYS+ A + + +
Sbjct: 122 FPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPV 181
Query: 1005 YTLEMCMTGLDKNLASVFYKTQSSSAAQMTNVSGIRKILAQSEINDFEFDPCGYSMNAIE 1184
YTLEMCMTGLD+ ASVFYKT+ SSAA MT SGIRKIL SEI DFEF+PCGYSMN+IE
Sbjct: 182 YTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIE 241
Query: 1185 GSAISTIHVTPEDGFSYASFEAAGYDPKSVSLEELIERVLACFGPTEFSIAVHAEDANDK 1364
G+A+STIH+TPEDGFSYASFEA GYD K++ L L+ERVLACF P EFSIA+HA+ A
Sbjct: 242 GAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKL 301
Query: 1365 FQWDCR-DVMGYNHGGMSYQELEQGGAIVYRSFVKAEGCGSPRSVLKDC 1508
+ C DV GY+ S +E +GG+IVY+ F + CGSP+SVLK C
Sbjct: 302 LERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGC 350