BLASTX nr result

ID: Coptis25_contig00006624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006624
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277668.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase ...   220   e-128
ref|XP_003539804.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase-...   213   e-124
ref|XP_002299936.1| predicted protein [Populus trichocarpa] gi|2...   216   e-123
ref|XP_002313312.1| predicted protein [Populus trichocarpa] gi|1...   216   e-123
ref|XP_004149717.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   214   e-123

>ref|XP_002277668.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase isoform 2 [Vitis
            vinifera] gi|225450075|ref|XP_002277645.1| PREDICTED: 42
            kDa peptidyl-prolyl isomerase isoform 1 [Vitis vinifera]
            gi|297736282|emb|CBI24920.3| unnamed protein product
            [Vitis vinifera]
          Length = 365

 Score =  220 bits (561), Expect(3) = e-128
 Identities = 104/119 (87%), Positives = 114/119 (95%)
 Frame = -2

Query: 1116 FEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKEGSFSFPNVP 937
            FEDTW EQRP+E+V+GKEK +MTGLAI V++MKSGE ALLHVGWELGYGKEGSFSFPNVP
Sbjct: 87   FEDTWNEQRPVEIVIGKEKKEMTGLAIGVSNMKSGERALLHVGWELGYGKEGSFSFPNVP 146

Query: 936  PMADLIYEVELIGFDETKEGKARGDMTVEERIGAADRRKMEGNVLFKDEKLEEAMQQYE 760
            PMAD++YEVELIGFDETKEGKARGDMTVEERIGAADRRKM+GNV FK+EKLEEAMQQYE
Sbjct: 147  PMADILYEVELIGFDETKEGKARGDMTVEERIGAADRRKMDGNVYFKEEKLEEAMQQYE 205



 Score =  166 bits (420), Expect(3) = e-128
 Identities = 81/88 (92%), Positives = 85/88 (96%)
 Frame = -1

Query: 694 AIAYMGDDFMFQLMGKYRDMALAVKNPCHLNIAACLIKLKRYEEAIPQCSIVLSEDENNV 515
           AIAYMGDDFMFQL GKYRDMALAVKNPCHLN+AACLIKLKRYEEAI QCSIVL+EDENNV
Sbjct: 207 AIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLKRYEEAIGQCSIVLAEDENNV 266

Query: 514 KAMFRRGKAKAELGQTDAAREDFLKARK 431
           KA+FRRGKA+AELGQTDAAREDF KARK
Sbjct: 267 KALFRRGKARAELGQTDAAREDFSKARK 294



 Score =  122 bits (306), Expect(3) = e-128
 Identities = 56/78 (71%), Positives = 62/78 (79%)
 Frame = -3

Query: 383 DFLKARKYAPEDKVIVKELRLLDEDDKAVYQKQKEIYKGIFGPRPEPKPKQKNWFIFVWQ 204
           DF KARKYAPEDK I +ELRLL E DKAVYQKQKEIYKGIFGP PEPKPK+ NW I  WQ
Sbjct: 288 DFSKARKYAPEDKAISRELRLLAEHDKAVYQKQKEIYKGIFGPPPEPKPKKTNWLILFWQ 347

Query: 203 WLLAFFYRLFKLEKQKVN 150
           WL++  Y LFK E+ K +
Sbjct: 348 WLVSLLYSLFKRERHKAD 365


>ref|XP_003539804.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase-like [Glycine max]
          Length = 370

 Score =  213 bits (542), Expect(3) = e-124
 Identities = 102/119 (85%), Positives = 111/119 (93%)
 Frame = -2

Query: 1116 FEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKEGSFSFPNVP 937
            FEDTWQEQRPIEMVLGKEK +MTGL I VASMK+GE AL+ VGWELGYG+EGSFSFPNVP
Sbjct: 89   FEDTWQEQRPIEMVLGKEKKEMTGLGIGVASMKAGERALVRVGWELGYGEEGSFSFPNVP 148

Query: 936  PMADLIYEVELIGFDETKEGKARGDMTVEERIGAADRRKMEGNVLFKDEKLEEAMQQYE 760
            P ADL+YEVELIGFDETKEGKAR DMTVEERIGAADRRKM+GN L+++EKLEEAMQQYE
Sbjct: 149  PKADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQEEKLEEAMQQYE 207



 Score =  160 bits (404), Expect(3) = e-124
 Identities = 78/88 (88%), Positives = 81/88 (92%)
 Frame = -1

Query: 694 AIAYMGDDFMFQLMGKYRDMALAVKNPCHLNIAACLIKLKRYEEAIPQCSIVLSEDENNV 515
           AIAYMGDDFMFQL GKYRDMALAVKNPCHLN+AACLIKL RYEEAI QCSIVL EDENNV
Sbjct: 209 AIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCSIVLGEDENNV 268

Query: 514 KAMFRRGKAKAELGQTDAAREDFLKARK 431
           KA+FRRGKA+A LGQTD AREDFLKA K
Sbjct: 269 KALFRRGKARAALGQTDTAREDFLKASK 296



 Score =  120 bits (301), Expect(3) = e-124
 Identities = 55/76 (72%), Positives = 62/76 (81%)
 Frame = -3

Query: 383 DFLKARKYAPEDKVIVKELRLLDEDDKAVYQKQKEIYKGIFGPRPEPKPKQKNWFIFVWQ 204
           DFLKA KYAP+DK I KELRLL E DKAVYQKQKEIYKGIFGPRP+P PK +NW I +WQ
Sbjct: 290 DFLKASKYAPQDKAIAKELRLLAEHDKAVYQKQKEIYKGIFGPRPQPVPKPRNWLILIWQ 349

Query: 203 WLLAFFYRLFKLEKQK 156
           WLL+ FY L  L K++
Sbjct: 350 WLLSVFYGLVTLFKRQ 365


>ref|XP_002299936.1| predicted protein [Populus trichocarpa] gi|222847194|gb|EEE84741.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  216 bits (551), Expect(3) = e-123
 Identities = 103/119 (86%), Positives = 110/119 (92%)
 Frame = -2

Query: 1116 FEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKEGSFSFPNVP 937
            FEDTW EQRP EMVLGKEK +M GLA+ V+SMK+GE ALLHVGWELGYGKEGSFSFPNVP
Sbjct: 87   FEDTWHEQRPFEMVLGKEKKEMAGLAVGVSSMKAGERALLHVGWELGYGKEGSFSFPNVP 146

Query: 936  PMADLIYEVELIGFDETKEGKARGDMTVEERIGAADRRKMEGNVLFKDEKLEEAMQQYE 760
            PMAD+IYEVELIGFDE +EGKARGDMT EERIGAADRRKM+GN LFKDEKLEEAMQQYE
Sbjct: 147  PMADIIYEVELIGFDEVREGKARGDMTAEERIGAADRRKMDGNSLFKDEKLEEAMQQYE 205



 Score =  162 bits (409), Expect(3) = e-123
 Identities = 78/88 (88%), Positives = 84/88 (95%)
 Frame = -1

Query: 694 AIAYMGDDFMFQLMGKYRDMALAVKNPCHLNIAACLIKLKRYEEAIPQCSIVLSEDENNV 515
           AIAY+GDDFMFQL GKYRDMALAVKNPCHLN+AACLIKLKR+EEAI QC+IVL EDENN 
Sbjct: 207 AIAYLGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLKRHEEAIAQCTIVLVEDENNA 266

Query: 514 KAMFRRGKAKAELGQTDAAREDFLKARK 431
           KA+FRRGKA+AELGQTDAAREDFLKARK
Sbjct: 267 KALFRRGKARAELGQTDAAREDFLKARK 294



 Score =  113 bits (283), Expect(3) = e-123
 Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 7/85 (8%)
 Frame = -3

Query: 383 DFLKARKYAPEDKVIVKELRLLDEDDKAVYQKQKEIYKGIFGPRPEPKPKQKN------- 225
           DFLKARK+APEDK I +ELRLLDE DKA+Y+KQKEIYKGIFGP P PKPK  N       
Sbjct: 288 DFLKARKHAPEDKAITRELRLLDEHDKAIYKKQKEIYKGIFGPPPRPKPKPANLLTRMWQ 347

Query: 224 WFIFVWQWLLAFFYRLFKLEKQKVN 150
           W   + QWLL+  YRLFK E++K +
Sbjct: 348 WLTLICQWLLSLIYRLFKRERRKAD 372


>ref|XP_002313312.1| predicted protein [Populus trichocarpa] gi|118485759|gb|ABK94729.1|
            unknown [Populus trichocarpa] gi|222849720|gb|EEE87267.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  216 bits (550), Expect(3) = e-123
 Identities = 102/119 (85%), Positives = 111/119 (93%)
 Frame = -2

Query: 1116 FEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKEGSFSFPNVP 937
            F+DTW EQRP EMVLGKEKN+M GLA+ V+SMK+GE ALLHVGWELGYGKEG+FSFPNVP
Sbjct: 84   FDDTWHEQRPFEMVLGKEKNEMAGLAVGVSSMKAGERALLHVGWELGYGKEGNFSFPNVP 143

Query: 936  PMADLIYEVELIGFDETKEGKARGDMTVEERIGAADRRKMEGNVLFKDEKLEEAMQQYE 760
            PMAD+IYEVELIGFDE KEGKARGDMT EERIGAADRRKM+GN LFK+EKLEEAMQQYE
Sbjct: 144  PMADIIYEVELIGFDEVKEGKARGDMTAEERIGAADRRKMDGNSLFKEEKLEEAMQQYE 202



 Score =  162 bits (410), Expect(3) = e-123
 Identities = 78/88 (88%), Positives = 84/88 (95%)
 Frame = -1

Query: 694 AIAYMGDDFMFQLMGKYRDMALAVKNPCHLNIAACLIKLKRYEEAIPQCSIVLSEDENNV 515
           AIAY+GDDFMFQL GKYRDMALAVKNPCHLN+AACLIKL+RYEEAI QC+IVL EDENN 
Sbjct: 204 AIAYLGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLERYEEAIAQCTIVLVEDENNA 263

Query: 514 KAMFRRGKAKAELGQTDAAREDFLKARK 431
           KA+FRRGKA+AELGQTDAAREDFLKARK
Sbjct: 264 KALFRRGKARAELGQTDAAREDFLKARK 291



 Score =  113 bits (283), Expect(3) = e-123
 Identities = 54/85 (63%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
 Frame = -3

Query: 383 DFLKARKYAPEDKVIVKELRLLDEDDKAVYQKQKEIYKGIFGPRPEPKPKQKN------- 225
           DFLKARK+APEDK I++ELRLLDE DKA+Y+KQKEIY+GIFGP P+PKPK  N       
Sbjct: 285 DFLKARKHAPEDKAILRELRLLDEHDKAIYKKQKEIYRGIFGPPPQPKPKPTNVLIRIWQ 344

Query: 224 WFIFVWQWLLAFFYRLFKLEKQKVN 150
           W I V QWLL+  YRLF+ E+ K +
Sbjct: 345 WSILVCQWLLSLIYRLFRRERHKAD 369


>ref|XP_004149717.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42-like [Cucumis
            sativus]
          Length = 369

 Score =  214 bits (545), Expect(3) = e-123
 Identities = 102/119 (85%), Positives = 112/119 (94%)
 Frame = -2

Query: 1116 FEDTWQEQRPIEMVLGKEKNQMTGLAIAVASMKSGECALLHVGWELGYGKEGSFSFPNVP 937
            FEDTW E RP+E+VLGKEK +MTGL+I VASMKSGE ALLHVGWEL YGKEG+FSFPNVP
Sbjct: 87   FEDTWNELRPLELVLGKEKKEMTGLSIGVASMKSGERALLHVGWELAYGKEGNFSFPNVP 146

Query: 936  PMADLIYEVELIGFDETKEGKARGDMTVEERIGAADRRKMEGNVLFKDEKLEEAMQQYE 760
            PM+D++YEVELIGFDETKEGKAR DMTVEERIGAADRRKM+GNVLFK+EKLEEAMQQYE
Sbjct: 147  PMSDVLYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNVLFKEEKLEEAMQQYE 205



 Score =  160 bits (406), Expect(3) = e-123
 Identities = 77/88 (87%), Positives = 84/88 (95%)
 Frame = -1

Query: 694 AIAYMGDDFMFQLMGKYRDMALAVKNPCHLNIAACLIKLKRYEEAIPQCSIVLSEDENNV 515
           AIAYMGDDFMFQL GKYRDMALAVKNPCHLN++ACLIKLKRYEEAI QCS+VL+EDE+N 
Sbjct: 207 AIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMSACLIKLKRYEEAIAQCSMVLAEDESNA 266

Query: 514 KAMFRRGKAKAELGQTDAAREDFLKARK 431
           KA+FRRGKA+AELGQTDAARED LKARK
Sbjct: 267 KALFRRGKARAELGQTDAAREDLLKARK 294



 Score =  116 bits (291), Expect(3) = e-123
 Identities = 56/78 (71%), Positives = 63/78 (80%), Gaps = 3/78 (3%)
 Frame = -3

Query: 383 DFLKARKYAPEDKVIVKELRLLDEDDKAVYQKQKEIYKGIFGPRPEPKPKQ---KNWFIF 213
           D LKARKYAPEDK I +EL+LL E DKAVYQKQKEIYKGIFGPRPEPKPK        I 
Sbjct: 288 DLLKARKYAPEDKAIGRELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTQLIL 347

Query: 212 VWQWLLAFFYRLFKLEKQ 159
           +WQWL++FFYRLFK E++
Sbjct: 348 IWQWLISFFYRLFKREEK 365


Top