BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006621
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              501   e-139
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   501   e-139
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re...   484   e-134
ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...   476   e-132
ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828...   476   e-132

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  501 bits (1290), Expect = e-139
 Identities = 266/357 (74%), Positives = 284/357 (79%), Gaps = 1/357 (0%)
 Frame = +1

Query: 1    IMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 177
            IMQKV+DAL+KG+ MSN G+VLEDDPEYQLIVDCNALSVDIENEIVI+HNF+RDNYRLKF
Sbjct: 105  IMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKF 164

Query: 178  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 357
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL
Sbjct: 165  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 224

Query: 358  KKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 537
            KKT                   FVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKM
Sbjct: 225  KKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKM 284

Query: 538  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 717
            PACNVQLLGAKKK LAGFSTA+S   VG++EQTEIFQSTPPSLRMRACRLLAAKSTL+AR
Sbjct: 285  PACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSAR 344

Query: 718  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXXXXXXX 897
            VDS RGDPTGK GR LR+EILKKIEKWQE             DSEP              
Sbjct: 345  VDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKE 404

Query: 898  XYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXSGKLRVSIGQSRLAAKVA 1068
             YA+TDMRKLANRMQFG+PEESS                +GKLRVS+GQS+LAAKVA
Sbjct: 405  RYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAKVA 461


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
            vinifera]
          Length = 489

 Score =  501 bits (1290), Expect = e-139
 Identities = 266/357 (74%), Positives = 284/357 (79%), Gaps = 1/357 (0%)
 Frame = +1

Query: 1    IMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 177
            IMQKV+DAL+KG+ MSN G+VLEDDPEYQLIVDCNALSVDIENEIVI+HNF+RDNYRLKF
Sbjct: 71   IMQKVEDALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRDNYRLKF 130

Query: 178  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 357
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL
Sbjct: 131  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 190

Query: 358  KKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 537
            KKT                   FVESRMGYI+PNLSAIVGSAVAAKLMGTAGGL+ALAKM
Sbjct: 191  KKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKM 250

Query: 538  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 717
            PACNVQLLGAKKK LAGFSTA+S   VG++EQTEIFQSTPPSLRMRACRLLAAKSTL+AR
Sbjct: 251  PACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSAR 310

Query: 718  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXXXXXXX 897
            VDS RGDPTGK GR LR+EILKKIEKWQE             DSEP              
Sbjct: 311  VDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKE 370

Query: 898  XYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXSGKLRVSIGQSRLAAKVA 1068
             YA+TDMRKLANRMQFG+PEESS                +GKLRVS+GQS+LAAKVA
Sbjct: 371  RYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAKVA 427


>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
            [Medicago truncatula]
          Length = 484

 Score =  484 bits (1247), Expect = e-134
 Identities = 257/356 (72%), Positives = 279/356 (78%)
 Frame = +1

Query: 1    IMQKVDDALQKGNMSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKFP 180
            +MQKV++AL+KG+  +QGL LEDDPEYQLIV+CNALSVDIENEIVI+HNF+RD YRLKFP
Sbjct: 67   VMQKVEEALKKGSDVSQGLDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFP 126

Query: 181  ELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENLK 360
            ELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTT+GKPLPEE L 
Sbjct: 127  ELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKPLPEEVLS 186

Query: 361  KTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKMP 540
            KT                   FVESRMGYI+PN+SAIVGSAVAAKLMGTAGGLSALAKMP
Sbjct: 187  KTIEACDRALALDSAKKKVLDFVESRMGYIAPNVSAIVGSAVAAKLMGTAGGLSALAKMP 246

Query: 541  ACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAARV 720
            ACNVQLLGAKKK LAGFSTA+S  HVG++EQTEIFQ+TPPS RMRACRL+AAKSTLAARV
Sbjct: 247  ACNVQLLGAKKKNLAGFSTATSQFHVGYIEQTEIFQTTPPSFRMRACRLVAAKSTLAARV 306

Query: 721  DSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXXXXXXXX 900
            DSIRGDP+GK GR+L+DEI KKIEKWQE             DSEP               
Sbjct: 307  DSIRGDPSGKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKER 366

Query: 901  YAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXSGKLRVSIGQSRLAAKVA 1068
            YA+TDMRKLANRMQFGIPEESS                SGKLRVS GQS+LAAKVA
Sbjct: 367  YAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAKVA 422


>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
            communis] gi|223535305|gb|EEF36980.1| U4/U6 small nuclear
            ribonucleoprotein Prp31, putative [Ricinus communis]
          Length = 774

 Score =  476 bits (1226), Expect = e-132
 Identities = 256/357 (71%), Positives = 276/357 (77%), Gaps = 1/357 (0%)
 Frame = +1

Query: 1    IMQKVDDALQKGN-MSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 177
            IMQKV+ AL+KG+  S+ G+VLEDDPEYQLIVDCNALSVDIENEI+I+HNF+RD YRLKF
Sbjct: 383  IMQKVEGALEKGSDESDHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKF 442

Query: 178  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 357
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPL EE L
Sbjct: 443  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEEVL 502

Query: 358  KKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 537
            +KT                   FVESRMGYI+PNLSAIVGSAVAAKLMGTAGGLSALAKM
Sbjct: 503  QKTVDACDRALALDTAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLSALAKM 562

Query: 538  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 717
            PACNVQLLGAKKK LAGFSTA+S   VG++EQTE+FQSTPPSLR+RACRLLAAKSTLAAR
Sbjct: 563  PACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTPPSLRIRACRLLAAKSTLAAR 622

Query: 718  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXXXXXXX 897
            +DS RGDP+G  GR LR+ I KKIEKWQE             DSEP              
Sbjct: 623  IDSTRGDPSGNTGRTLREAIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKE 682

Query: 898  XYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXSGKLRVSIGQSRLAAKVA 1068
             YAVTDMRKLANRMQFG+PEESS                SGKLRVSIGQS+LAAKVA
Sbjct: 683  RYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSIGQSKLAAKVA 739


>ref|NP_001132587.1| hypothetical protein [Zea mays] gi|194694828|gb|ACF81498.1| unknown
            [Zea mays] gi|414585941|tpg|DAA36512.1| TPA: hypothetical
            protein ZEAMMB73_628259 [Zea mays]
            gi|414585942|tpg|DAA36513.1| TPA: hypothetical protein
            ZEAMMB73_628259 [Zea mays]
          Length = 485

 Score =  476 bits (1225), Expect = e-132
 Identities = 255/357 (71%), Positives = 275/357 (77%), Gaps = 1/357 (0%)
 Frame = +1

Query: 1    IMQKVDDALQKG-NMSNQGLVLEDDPEYQLIVDCNALSVDIENEIVIVHNFVRDNYRLKF 177
            IMQKV++ALQKG + SNQG +LE+DPEYQLIVDCNALSVDIENEI+I+HNF+RD YRLKF
Sbjct: 66   IMQKVENALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDKYRLKF 125

Query: 178  PELESLVHHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEENL 357
            PELESLVHHPIDYARVVKKIGNE DLTLVDLEGLLPSAIIMVVSVTASTTSGKPL E+NL
Sbjct: 126  PELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLSEDNL 185

Query: 358  KKTXXXXXXXXXXXXXXXXXXXFVESRMGYISPNLSAIVGSAVAAKLMGTAGGLSALAKM 537
            +KT                   FVESRMGYI+PNLSAIVGSAVA+KLMGTAGGL ALAKM
Sbjct: 186  EKTTEACDRALTLDASKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKM 245

Query: 538  PACNVQLLGAKKKTLAGFSTASSHMHVGFLEQTEIFQSTPPSLRMRACRLLAAKSTLAAR 717
            PACNVQLLGAK+K LAGFSTA+S   VG+LEQTE+FQSTPP LR RACRL+AAKSTLAAR
Sbjct: 246  PACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTEVFQSTPPPLRTRACRLIAAKSTLAAR 305

Query: 718  VDSIRGDPTGKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXXXXXXX 897
            +DSIRGDPTGK GRNL +EI KKIEKWQE             DSEP              
Sbjct: 306  IDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRLRKMKE 365

Query: 898  XYAVTDMRKLANRMQFGIPEESSXXXXXXXXXXXXXXXXSGKLRVSIGQSRLAAKVA 1068
             YA TDM KLANRMQFGIPEESS                SGKLRVS GQS+LAAKVA
Sbjct: 366  RYAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAKVA 422