BLASTX nr result
ID: Coptis25_contig00006620
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006620
(596 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272168.1| PREDICTED: golgin candidate 6-like [Vitis vi... 108 7e-36
emb|CBI35134.3| unnamed protein product [Vitis vinifera] 108 7e-36
ref|XP_002521485.1| vesicle docking protein P115, putative [Rici... 106 4e-32
ref|XP_002298552.1| predicted protein [Populus trichocarpa] gi|2... 99 1e-31
ref|XP_004142783.1| PREDICTED: golgin candidate 6-like [Cucumis ... 96 9e-30
>ref|XP_002272168.1| PREDICTED: golgin candidate 6-like [Vitis vinifera]
Length = 915
Score = 108 bits (271), Expect(2) = 7e-36
Identities = 69/138 (50%), Positives = 76/138 (55%), Gaps = 47/138 (34%)
Frame = +1
Query: 1 QDLLGRNATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKT 177
QDLLGRNA LAED+AKTGG +S+ Q A G ERVQVETLRRDLQEA QR+E+LK+EK
Sbjct: 732 QDLLGRNANLAEDLAKTGGGSISQPEQRAGGASERVQVETLRRDLQEASQRLEMLKTEKA 791
Query: 178 KIETEASMYCNL----------------------------------------------NA 219
KIE+EASMY NL A
Sbjct: 792 KIESEASMYQNLAGKMESDLQSLSDAYNSLEQANYHLEKEVKALKSGGATPSPDIDAIKA 851
Query: 220 EGREETQKEGEAELNDLL 273
E REE QKE EAELNDLL
Sbjct: 852 EAREEAQKESEAELNDLL 869
Score = 67.4 bits (163), Expect(2) = 7e-36
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +2
Query: 275 QSKVERLSARLAELGEDVDSHLDGIGDDVVLPEDSEDEED 394
QSKVE+LSARL ELGEDVD L+GIGDD+ LPEDSEDEED
Sbjct: 876 QSKVEKLSARLLELGEDVDKLLEGIGDDMGLPEDSEDEED 915
>emb|CBI35134.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 108 bits (271), Expect(2) = 7e-36
Identities = 69/138 (50%), Positives = 76/138 (55%), Gaps = 47/138 (34%)
Frame = +1
Query: 1 QDLLGRNATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKT 177
QDLLGRNA LAED+AKTGG +S+ Q A G ERVQVETLRRDLQEA QR+E+LK+EK
Sbjct: 723 QDLLGRNANLAEDLAKTGGGSISQPEQRAGGASERVQVETLRRDLQEASQRLEMLKTEKA 782
Query: 178 KIETEASMYCNL----------------------------------------------NA 219
KIE+EASMY NL A
Sbjct: 783 KIESEASMYQNLAGKMESDLQSLSDAYNSLEQANYHLEKEVKALKSGGATPSPDIDAIKA 842
Query: 220 EGREETQKEGEAELNDLL 273
E REE QKE EAELNDLL
Sbjct: 843 EAREEAQKESEAELNDLL 860
Score = 67.4 bits (163), Expect(2) = 7e-36
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +2
Query: 275 QSKVERLSARLAELGEDVDSHLDGIGDDVVLPEDSEDEED 394
QSKVE+LSARL ELGEDVD L+GIGDD+ LPEDSEDEED
Sbjct: 867 QSKVEKLSARLLELGEDVDKLLEGIGDDMGLPEDSEDEED 906
>ref|XP_002521485.1| vesicle docking protein P115, putative [Ricinus communis]
gi|223539384|gb|EEF40975.1| vesicle docking protein P115,
putative [Ricinus communis]
Length = 911
Score = 106 bits (264), Expect(2) = 4e-32
Identities = 68/138 (49%), Positives = 78/138 (56%), Gaps = 47/138 (34%)
Frame = +1
Query: 1 QDLLGRNATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKT 177
Q+LLGRNATLAED+AK GG+ S+S+Q A+G ERVQ ETLRRDLQEA QR+E+LK+EK+
Sbjct: 726 QNLLGRNATLAEDLAKIGGSASSQSDQRASGGLERVQAETLRRDLQEANQRIEMLKAEKS 785
Query: 178 KIETEASMYCNL----------------------------------------------NA 219
KIETEAS Y NL A
Sbjct: 786 KIETEASTYQNLAGKMESDLKSLSDAYNSLEEANFHLEKEVKALKNGGSSAVPDIKAVKA 845
Query: 220 EGREETQKEGEAELNDLL 273
E REE QKE EAELNDLL
Sbjct: 846 EAREEAQKESEAELNDLL 863
Score = 57.4 bits (137), Expect(2) = 4e-32
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +2
Query: 275 QSKVERLSARLAELGEDVDSHLDGIGDDVVLPEDSEDEED 394
QSKVE+LSA+L ELGEDVD+ L+GIGD+ LP+D E+EE+
Sbjct: 870 QSKVEKLSAKLLELGEDVDALLEGIGDESGLPDDIEEEEE 909
>ref|XP_002298552.1| predicted protein [Populus trichocarpa] gi|222845810|gb|EEE83357.1|
predicted protein [Populus trichocarpa]
Length = 915
Score = 99.4 bits (246), Expect(2) = 1e-31
Identities = 64/138 (46%), Positives = 75/138 (54%), Gaps = 47/138 (34%)
Frame = +1
Query: 1 QDLLGRNATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKT 177
Q+LLGRNATLAE++ KTGG+ S+ Q +G +RVQ ETLRRDLQEA QR+E+LK+EK
Sbjct: 732 QNLLGRNATLAENLTKTGGSVSSQPEQRTSGGLDRVQAETLRRDLQEASQRIEMLKAEKA 791
Query: 178 KIETEASMYCNL----------------------------------------------NA 219
KIE+EASMY NL A
Sbjct: 792 KIESEASMYQNLAGKMESDLKSLSDAYNSLEQANFHLEKEVKALKSGGASTPPDVEAIRA 851
Query: 220 EGREETQKEGEAELNDLL 273
E REE QKE EAELNDLL
Sbjct: 852 EAREEAQKESEAELNDLL 869
Score = 63.2 bits (152), Expect(2) = 1e-31
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +2
Query: 275 QSKVERLSARLAELGEDVDSHLDGIGDDVVLPEDSEDEED 394
QS+VE+LSARL ELGEDVD L+G+GDD+ LPEDSE EED
Sbjct: 876 QSRVEKLSARLMELGEDVDKLLEGVGDDMGLPEDSEKEED 915
>ref|XP_004142783.1| PREDICTED: golgin candidate 6-like [Cucumis sativus]
Length = 911
Score = 95.5 bits (236), Expect(2) = 9e-30
Identities = 60/137 (43%), Positives = 70/137 (51%), Gaps = 46/137 (33%)
Frame = +1
Query: 1 QDLLGRNATLAEDMAKTGGAGVSRSNQANGDKERVQVETLRRDLQEAKQRVELLKSEKTK 180
QDLLGRNATLAED++K GG S +A+G RVQ+ETL+RDLQE +R+ELLK EK K
Sbjct: 730 QDLLGRNATLAEDLSKIGGNDSSSEQRASGPSNRVQLETLQRDLQETSKRLELLKEEKVK 789
Query: 181 IETEASMYCNL----------------------------------------------NAE 222
IE++AS Y NL AE
Sbjct: 790 IESDASYYKNLASKMESDLKSLSDAYNSLEQANYHLEKEAKALKSGEHSISPDIEAIKAE 849
Query: 223 GREETQKEGEAELNDLL 273
REE QKE E ELNDLL
Sbjct: 850 AREEAQKESETELNDLL 866
Score = 60.5 bits (145), Expect(2) = 9e-30
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 275 QSKVERLSARLAELGEDVDSHLDGIGDDVVLPEDSEDEE 391
QS+V+RLSARL ELGEDVD L+GIGDD+ +PED EDE+
Sbjct: 873 QSRVDRLSARLIELGEDVDKLLEGIGDDLGMPEDDEDED 911