BLASTX nr result

ID: Coptis25_contig00006618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006618
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263304.2| PREDICTED: uncharacterized protein LOC100249...   103   1e-19
emb|CBI41024.3| unnamed protein product [Vitis vinifera]               94   7e-17
ref|XP_004160947.1| PREDICTED: uncharacterized protein LOC101230...    94   9e-17
ref|XP_002274729.1| PREDICTED: uncharacterized protein LOC100259...    93   2e-16
ref|XP_002438557.1| hypothetical protein SORBIDRAFT_10g021900 [S...    91   6e-16

>ref|XP_002263304.2| PREDICTED: uncharacterized protein LOC100249180 [Vitis vinifera]
          Length = 659

 Score =  103 bits (257), Expect = 1e-19
 Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 15/375 (4%)
 Frame = -3

Query: 1227 VMVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNFSVPLENKLKNGK 1048
            +M  QS  RNQ  KGFKVKHA Q+ L+L ICIWL+YQ+++S+ K+  F    ++   +GK
Sbjct: 1    MMFRQSPRRNQRSKGFKVKHAVQICLLLGICIWLIYQVKSSYEKKAAFD---KSSQISGK 57

Query: 1047 VDFGRKVTAGSNVGVEIDFHDGNSIIQHRNV-DDGENGDDHLDQNATEKPQEEPLQHED- 874
            V  G ++        ++   D N  ++ R + DD + G++  ++N TE+   +P ++ED 
Sbjct: 58   VQNGNEIP-------KLGRKDLNPQLEERGIKDDMQRGEEEEEENRTEEEPSKPEENEDI 110

Query: 873  ---------SDGIISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKEGKDYK 721
                      +G    +  N+ + V+ +++G+   EE + T  S G++  E     K+ K
Sbjct: 111  GKGGGDDEVHEGRTEVDAENKGDSVDGEKEGEDRKEEGEET-ESKGEENEE--SREKETK 167

Query: 720  RVTEENGPELEHEGIDAKDNPIKQHXXXXXXXXXXXNTIGDGDEVRSSVKDRDTKESAEE 541
                E+G + E    D+++N  K+             T+ D +  + + K  +++ES E 
Sbjct: 168  EEESEDGQQKEMRDEDSEENKEKE------------ATVEDSEVSKENEKREESEESKEN 215

Query: 540  KTLSPAEAESNIPADQSETISGINGFHDENGIPPDGLDLENNNVSETSSDDDSATIMKDD 361
            +    +E       +  ET        +E G        E N      S +D A    D 
Sbjct: 216  EKQEESEDSKEKENENKET-------KEEEG------SEEKNMEGNEGSSEDQANDAHDS 262

Query: 360  SRAG---KALKVESANSSQA-DSKTRQTVEEGFSSENAVKFDKPGINGSAETTEKGNLVL 193
            +  G   +  K + A+S  A +++   T  E  +SEN+ + D+P    +  T ++     
Sbjct: 263  NNEGAREEHYKGDDASSEVAHEAQHTTTGTENDASENSNE-DQPDNKNTDGTEQENTANS 321

Query: 192  EDSNSVLSKHPIEEN 148
             + + V     ++EN
Sbjct: 322  TEGSEVNQNEAVDEN 336


>emb|CBI41024.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 93/382 (24%), Positives = 154/382 (40%), Gaps = 23/382 (6%)
 Frame = -3

Query: 1224 MVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNFSVPLENKLKNGKV 1045
            M  QS  RNQ  KGFKVKHA Q+ L+L ICIWL+YQ+++S+ K+  F    ++   +GKV
Sbjct: 1    MFRQSPRRNQRSKGFKVKHAVQICLLLGICIWLIYQVKSSYEKKAAFD---KSSQISGKV 57

Query: 1044 DFGRKVTAGSNVGVEIDFHDGNSIIQHRNVDDGENGDDHLDQNATEKPQEEPLQHEDSDG 865
              G ++        ++   D N  ++ R + D  + +    +  +E  Q++ ++ EDS+ 
Sbjct: 58   QNGNEIP-------KLGRKDLNPQLEERGIKD--DMEKETKEEESEDGQQKEMRDEDSEE 108

Query: 864  IISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKEGKDYKRVTEENGPELEH 685
                    ED EV  + + +  +EE K           E  +E +D K    EN    E 
Sbjct: 109  NKEKEATVEDSEVSKENEKREESEESKEN---------EKQEESEDSKEKENENKETKEE 159

Query: 684  EGIDAKDNPIKQHXXXXXXXXXXXNTIGDGDEVRSSVKDRDTKESAEEKTLSPAEAESNI 505
            EG + K+    +               G  ++  +   D    E A E+     +A S +
Sbjct: 160  EGSEEKNMEGNE---------------GSSEDQANDAHD-SNNEGAREEHYKGDDASSEV 203

Query: 504  PADQSETISGINGFHDENGIP-------PDGLDLENNNVSETSS--------DDDSATIM 370
              +   T +G      EN           DG + EN   S   S        D+++A+I+
Sbjct: 204  AHEAQHTTTGTENDASENSNEDQPDNKNTDGTEQENTANSTEGSEVNQNEAVDENNASIV 263

Query: 369  KDDSRAGKALKVESANSSQADSKTRQTVEEGFSSENAVKFDKPGINGSAET--------T 214
            K +  +       SA  +  +S   Q V    ++  A   D P   G   T        +
Sbjct: 264  KSNEESASE-DGSSATLTTKESNEEQQVYTDSTTVIAETVDNPNPQGDESTLKTVVMAQS 322

Query: 213  EKGNLVLEDSNSVLSKHPIEEN 148
            E+ N      N   +++P   N
Sbjct: 323  EESNTASNGENPTTTENPEAAN 344


>ref|XP_004160947.1| PREDICTED: uncharacterized protein LOC101230130 [Cucumis sativus]
          Length = 728

 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 97/382 (25%), Positives = 157/382 (41%), Gaps = 24/382 (6%)
 Frame = -3

Query: 1224 MVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNF--SVPLENKLKNG 1051
            M   S  R+Q  KGFKVKHA Q+ ++L +C+WL+YQ+Q+S  K+  F  S  L+  +K G
Sbjct: 1    MFRSSPRRSQRSKGFKVKHALQIFILLGVCVWLVYQVQHSRGKKATFNESTKLDEVVKLG 60

Query: 1050 KVDFGRKVTAG-------------SNVGVEIDFHDGNSIIQHRNVDDGENGDDHLDQNAT 910
            + D   +V                +  G   +FHD     Q    +D EN D  +D    
Sbjct: 61   RKDLHPRVDENITRDESHREDEEETRRGGNDEFHD-----QQEVQEDTENKDFVVD---I 112

Query: 909  EKPQEEPLQHEDSDGIISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKE-G 733
            EK +EE      +  +    E  E++E+EN+ K    NEE K           E DKE G
Sbjct: 113  EKEREE------NSEVRKETETEENKEIENENK---ENEEIK-----------ENDKENG 152

Query: 732  KDYKRVTEENGPELEHEGIDAKDN-PIKQHXXXXXXXXXXXNTIGDGDEVRSSVKDRDTK 556
            +  K  ++ENG E    GI+   N   K+H               +G+E     +++D  
Sbjct: 153  EIQKSQSDENGEEGRGGGIEENVNEESKEHGNQEV----------NGNEESKGQENQDVN 202

Query: 555  ESAEEKTLSPAEAESNIPADQSETISGINGFHDENGIP-------PDGLDLENNNVSETS 397
             + E K         N  + + E    +NG  +  G+         +   LEN  V+   
Sbjct: 203  GNEESKVQENQGLSGNEESKEQEN-QEVNGSEESKGLENQEVNGNEESKGLENQEVNGNE 261

Query: 396  SDDDSATIMKDDSRAGKALKVESANSSQADSKTRQTVEEGFSSENAVKFDKPGINGSAET 217
                      + +   K L+ +  N ++         +EG  +E +   +    NG+ E+
Sbjct: 262  ERKGLENQEVNGNEESKELENQEVNGNEGSKGLEN--QEGNGNEESKGLENQEGNGNEES 319

Query: 216  TEKGNLVLEDSNSVLSKHPIEE 151
             EKGN    +    +++ P E+
Sbjct: 320  KEKGNQEENEGKDKVNEMPTED 341


>ref|XP_002274729.1| PREDICTED: uncharacterized protein LOC100259947 isoform 1 [Vitis
            vinifera] gi|359475528|ref|XP_003631696.1| PREDICTED:
            uncharacterized protein LOC100259947 isoform 2 [Vitis
            vinifera]
          Length = 511

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 102/403 (25%), Positives = 161/403 (39%), Gaps = 50/403 (12%)
 Frame = -3

Query: 1215 QSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNF-----SVPLENKLKNG 1051
            +S  RNQ  KGFKVKH  Q+ L+L +C WL+YQ+++SH K+  F      +    +  N 
Sbjct: 3    KSPSRNQRSKGFKVKHILQICLLLAVCFWLIYQVKHSHDKKKEFDANDAKISSNTQGGNE 62

Query: 1050 KVDFGRKVTAGSNVGVEIDFHDGNSIIQHRNVDDG-ENGDDHLDQNATEKPQEEPLQHED 874
             + FGRK       G   +   G    +  +   G E  +   D+   E+  +   + E+
Sbjct: 63   LLKFGRKDLHPRVDGEAKNEKHGEEETEEEDEAGGVEEEESKHDEEQEEEESKHDEEQEE 122

Query: 873  SDGIISHNE-----GNEDEEVENQQKGKLG---------NEEDKSTLPSDGDDAAELDKE 736
             +  +   E     G +DE  EN Q+   G         +EE +     D  ++ E + E
Sbjct: 123  EESKVDEREDEGRGGGDDEIDENDQERAEGESDHDEEVLDEEKEREEEGDEKESGEKESE 182

Query: 735  GKDYKRVTEENGPELEHEG-----IDAKDNPIKQHXXXXXXXXXXXNTIGDGDEVR---S 580
             KD     E+   + +H+G      +A++   K                G+ D++     
Sbjct: 183  EKDDLSENEKEMDDQDHDGGSRNAHEAREEHYKADDASSAVAHDTQTNGGEADKMEDFDE 242

Query: 579  SVKDRDTK------------ESAEEKTLSPAEAESNIPADQSETISGINGFHDENGI--- 445
            +  +++TK              AEE  L+  EA SN+  D  E  + IN    EN     
Sbjct: 243  NTLEQETKPNNNELSSEHKNSKAEEVELAENEASSNV-TDSQEKGTEINSPKSENSSLQN 301

Query: 444  PP------DGLDLENNNVSETSSDDDSATIMKDDSRAGKALKVESANSSQADSKTR-QTV 286
            PP      D  ++ N N SE S+ D S     D S         S  SS +D+K   +TV
Sbjct: 302  PPITTESNDQPEISNKNSSEVSNKDSSEVSNNDSSEL-------STKSSDSDTKNGIETV 354

Query: 285  EEGFSSENAVKFDKPGINGSAETTEKGNLVLEDSNSVLSKHPI 157
             +   ++NA         G    TE+G     D+  V+ K  I
Sbjct: 355  LDPIQAQNA--------TGEGINTEQG----ADTQHVVLKQTI 385


>ref|XP_002438557.1| hypothetical protein SORBIDRAFT_10g021900 [Sorghum bicolor]
            gi|241916780|gb|EER89924.1| hypothetical protein
            SORBIDRAFT_10g021900 [Sorghum bicolor]
          Length = 447

 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 95/376 (25%), Positives = 159/376 (42%), Gaps = 17/376 (4%)
 Frame = -3

Query: 1224 MVHQSVGRNQNPKGFKVKHAFQVSLVLVICIWLLYQIQNSHYKENNFSVPLENKLKNG-- 1051
            M+H S  RNQ  +G ++K   Q +L+L +  WLLYQ+++S  K+N +    E++L +   
Sbjct: 1    MLHHSNSRNQRNRGSRIKTLLQATLLLGVIFWLLYQVKHSFDKKNEYLDDAEDQLAHNDR 60

Query: 1050 KVDFGRKVTAGS-----NVGVEIDFHDGNSIIQHRNVDDGEN-GDDHLDQNATEKPQEEP 889
             V  GRK  AGS     N  V     +G +       D  EN G+   D+++T   +++ 
Sbjct: 61   SVFQGRKEKAGSYMVGDNSDVTTKPEEGAADHHSDTFDHNENTGETVFDKDSTNLHEDDK 120

Query: 888  LQHEDSDGIISHNEGNEDEEVENQQKGKLGNEEDKSTLPSDGDDAAELDKEGKDYKRVTE 709
              +E S+      EG +    +   +    N ED++T      +  + D E K     T+
Sbjct: 121  RNNERSEA-----EGGQINSADGNTEANNNNNEDETT---GHAEEGKHDTESKS----TD 168

Query: 708  ENGPELEHEGIDAKDNPIKQHXXXXXXXXXXXNTIGDGDEVRSSVKDRDTKESAEEK--- 538
            E+  E+   G D   N   Q            + +  GDE  S+    +  +   EK   
Sbjct: 169  ESKNEVNSTGDDMPRNNHSQEENTVEASGASHDEVVQGDESTSASGSGNGSDGEGEKKEA 228

Query: 537  --TLSPAEAESNIPADQSETISGINGFHDENG-IPPDGLDLENNNVSETSSDDDSATIMK 367
              T S +E+  ++   ++          DE G IP    D   N+ SE   D  SAT   
Sbjct: 229  VDTQSGSESLPDVAKAEATDDRATGSLPDETGNIPSVHTDNSQNDASENQGDATSATSDS 288

Query: 366  DDSRAGKALKVESA---NSSQADSKTRQTVEEGFSSENAVKFDKPGINGSAETTEKGNLV 196
             +   G+A+ +E+     S+ A S T    ++G SS++     +     ++   EKG   
Sbjct: 289  SEHGTGEAVHIETGLEDESATASSGTGSGDDKGNSSDSTPA--EENTETASGDDEKG--- 343

Query: 195  LEDSNSVLSKHPIEEN 148
            +E   +  + H  EEN
Sbjct: 344  METGTTTEASHSKEEN 359


Top