BLASTX nr result

ID: Coptis25_contig00006615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006615
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31426.3| unnamed protein product [Vitis vinifera]              108   2e-21
ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 1...   108   2e-21
ref|XP_002529604.1| E3 ubiquitin ligase PUB14, putative [Ricinus...    98   3e-18
ref|XP_003550969.1| PREDICTED: U-box domain-containing protein 1...    97   6e-18
ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 1...    96   2e-17

>emb|CBI31426.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  108 bits (270), Expect = 2e-21
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = +1

Query: 1   VMRTGSPRNRENVAAVLWSLCTADGKHLKTSKECGVEEALKDLSENGTDRAKRKAANLLE 180
           V++TGSPRNREN AAVLWSLCT D +HLK ++E G EEALK+LSENGTDRAKRKA N+LE
Sbjct: 485 VIKTGSPRNRENAAAVLWSLCTGDAQHLKIARELGAEEALKELSENGTDRAKRKAGNILE 544

Query: 181 LLHRTVEEVVSP 216
           LL R VE VV P
Sbjct: 545 LLQR-VEVVVDP 555


>ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 14 [Vitis vinifera]
          Length = 628

 Score =  108 bits (270), Expect = 2e-21
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = +1

Query: 1   VMRTGSPRNRENVAAVLWSLCTADGKHLKTSKECGVEEALKDLSENGTDRAKRKAANLLE 180
           V++TGSPRNREN AAVLWSLCT D +HLK ++E G EEALK+LSENGTDRAKRKA N+LE
Sbjct: 558 VIKTGSPRNRENAAAVLWSLCTGDAQHLKIARELGAEEALKELSENGTDRAKRKAGNILE 617

Query: 181 LLHRTVEEVVSP 216
           LL R VE VV P
Sbjct: 618 LLQR-VEVVVDP 628


>ref|XP_002529604.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223530937|gb|EEF32796.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 575

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = +1

Query: 1   VMRTGSPRNRENVAAVLWSLCTADGKHLKTSKECGVEEALKDLSENGTDRAKRKAANLLE 180
           V+RTGSPRNREN AAVLWSLC  D + LK +KE G EEALK+LSE+GTDRAKRKA +LLE
Sbjct: 502 VIRTGSPRNRENAAAVLWSLCAGDLQQLKLAKESGAEEALKELSESGTDRAKRKAGSLLE 561

Query: 181 LLHRTVEEVVS 213
           L+ R VE VV+
Sbjct: 562 LIQR-VEVVVN 571


>ref|XP_003550969.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 382

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = +1

Query: 1   VMRTGSPRNRENVAAVLWSLCTADGKHLKTSKECGVEEALKDLSENGTDRAKRKAANLLE 180
           V+RTGSPRNRENVAAVLWSLCT D   LK +KE G E AL++LSENGTDRAKRKA ++LE
Sbjct: 309 VIRTGSPRNRENVAAVLWSLCTGDPLQLKLAKEHGAEAALQELSENGTDRAKRKAGSILE 368

Query: 181 LLHR 192
           LL R
Sbjct: 369 LLQR 372


>ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 631

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = +1

Query: 1   VMRTGSPRNRENVAAVLWSLCTADGKHLKTSKECGVEEALKDLSENGTDRAKRKAANLLE 180
           V+RTGSPRNREN AAVLWSLCT D   LK +KE G E AL++LSENGTDRAKRKA ++LE
Sbjct: 558 VIRTGSPRNRENAAAVLWSLCTGDPLQLKLAKEHGAEAALQELSENGTDRAKRKAGSILE 617

Query: 181 LLHR 192
           LL R
Sbjct: 618 LLQR 621


Top