BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006614
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-l...   137   1e-31
ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-l...   141   5e-31
emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]   141   5e-31
ref|XP_002882748.1| hypothetical protein ARALYDRAFT_897386 [Arab...   135   7e-31
ref|NP_187789.1| TCP-1/cpn60 chaperonin family protein [Arabidop...   134   2e-30

>ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-like [Cucumis sativus]
           gi|449493528|ref|XP_004159333.1| PREDICTED: T-complex
           protein 1 subunit eta-like [Cucumis sativus]
          Length = 562

 Score =  137 bits (346), Expect(2) = 1e-31
 Identities = 77/119 (64%), Positives = 86/119 (72%)
 Frame = +3

Query: 396 KGGQAFIEDGVHSQSLIRSFRVASNLXXXXXXXXXXXXXXXXXXXXXXXXAISKIKELVV 575
           K  + FIEDGVHSQ+LIRS+R AS L                        AI K+KEL +
Sbjct: 109 KEAKPFIEDGVHSQNLIRSYRTASYL------------------------AIEKVKELAI 144

Query: 576 SIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEIFTSMVVDSVISIGNDDRLNMIGIKKV 752
           SIEGKS+EEKKSLLAKCAATTLSSKLIGGEK+ F SMVVDSVI+IGN+DRLNMIGIKKV
Sbjct: 145 SIEGKSLEEKKSLLAKCAATTLSSKLIGGEKDFFASMVVDSVIAIGNEDRLNMIGIKKV 203



 Score = 26.6 bits (57), Expect(2) = 1e-31
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
 Frame = +1

Query: 301 LLELVEAAQK-----KRKNATSSGQGSVTH-LFAGEFLKEAKP 411
           LL++V  A K      +   +  G G+ T  L A EFLKEAKP
Sbjct: 71  LLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKP 113


>ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-like [Vitis vinifera]
           gi|296088202|emb|CBI35717.3| unnamed protein product
           [Vitis vinifera]
          Length = 562

 Score =  141 bits (355), Expect = 5e-31
 Identities = 81/123 (65%), Positives = 86/123 (69%)
 Frame = +3

Query: 384 GRVFKGGQAFIEDGVHSQSLIRSFRVASNLXXXXXXXXXXXXXXXXXXXXXXXXAISKIK 563
           G   K  + FIEDGVH Q+LIRS+R AS L                        AI KIK
Sbjct: 105 GEFLKEAKPFIEDGVHPQNLIRSYRTASYL------------------------AIEKIK 140

Query: 564 ELVVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEIFTSMVVDSVISIGNDDRLNMIGI 743
           EL VSIEGKS+EEKKSLLAKCAATTLSSKLIGGEKE F SMVVDSVI+IGNDDRLNMIGI
Sbjct: 141 ELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDSVIAIGNDDRLNMIGI 200

Query: 744 KKV 752
           KKV
Sbjct: 201 KKV 203


>emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]
          Length = 567

 Score =  141 bits (355), Expect = 5e-31
 Identities = 81/123 (65%), Positives = 86/123 (69%)
 Frame = +3

Query: 384 GRVFKGGQAFIEDGVHSQSLIRSFRVASNLXXXXXXXXXXXXXXXXXXXXXXXXAISKIK 563
           G   K  + FIEDGVH Q+LIRS+R AS L                        AI KIK
Sbjct: 105 GEFLKEAKPFIEDGVHPQNLIRSYRTASYL------------------------AIEKIK 140

Query: 564 ELVVSIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEIFTSMVVDSVISIGNDDRLNMIGI 743
           EL VSIEGKS+EEKKSLLAKCAATTLSSKLIGGEKE F SMVVDSVI+IGNDDRLNMIGI
Sbjct: 141 ELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASMVVDSVIAIGNDDRLNMIGI 200

Query: 744 KKV 752
           KKV
Sbjct: 201 KKV 203


>ref|XP_002882748.1| hypothetical protein ARALYDRAFT_897386 [Arabidopsis lyrata subsp.
           lyrata] gi|297328588|gb|EFH59007.1| hypothetical protein
           ARALYDRAFT_897386 [Arabidopsis lyrata subsp. lyrata]
          Length = 558

 Score =  135 bits (340), Expect(2) = 7e-31
 Identities = 75/119 (63%), Positives = 86/119 (72%)
 Frame = +3

Query: 396 KGGQAFIEDGVHSQSLIRSFRVASNLXXXXXXXXXXXXXXXXXXXXXXXXAISKIKELVV 575
           K  + FIEDGVHSQ+LIRS+R AS L                        AI+K+KEL V
Sbjct: 110 KEAKPFIEDGVHSQNLIRSYRTASTL------------------------AIAKVKELAV 145

Query: 576 SIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEIFTSMVVDSVISIGNDDRLNMIGIKKV 752
           SIEGKS+EEKK LLAKCAATTLSSKLIGGEKE F +MVVD+V++IGNDDRLN+IGIKKV
Sbjct: 146 SIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDRLNLIGIKKV 204



 Score = 26.6 bits (57), Expect(2) = 7e-31
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
 Frame = +1

Query: 301 LLELVEAAQK-----KRKNATSSGQGSVTH-LFAGEFLKEAKP 411
           LL++V  A K      +   +  G G+ T  L A EFLKEAKP
Sbjct: 72  LLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKP 114


>ref|NP_187789.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
           gi|6671939|gb|AAF23199.1|AC016795_12 putative T-complex
           protein 1, ETA subunit [Arabidopsis thaliana]
           gi|17979243|gb|AAL49938.1| AT3g11830/F26K24_12
           [Arabidopsis thaliana] gi|20857172|gb|AAM26704.1|
           AT3g11830/F26K24_12 [Arabidopsis thaliana]
           gi|332641584|gb|AEE75105.1| TCP-1/cpn60 chaperonin
           family protein [Arabidopsis thaliana]
          Length = 557

 Score =  134 bits (337), Expect(2) = 2e-30
 Identities = 74/119 (62%), Positives = 86/119 (72%)
 Frame = +3

Query: 396 KGGQAFIEDGVHSQSLIRSFRVASNLXXXXXXXXXXXXXXXXXXXXXXXXAISKIKELVV 575
           K  + FIEDGVH+Q+LIRS+R AS L                        AI+K+KEL V
Sbjct: 109 KEAKPFIEDGVHAQNLIRSYRTASTL------------------------AIAKVKELAV 144

Query: 576 SIEGKSMEEKKSLLAKCAATTLSSKLIGGEKEIFTSMVVDSVISIGNDDRLNMIGIKKV 752
           SIEGKS+EEKK LLAKCAATTLSSKLIGGEKE F +MVVD+V++IGNDDRLN+IGIKKV
Sbjct: 145 SIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMAIGNDDRLNLIGIKKV 203



 Score = 26.6 bits (57), Expect(2) = 2e-30
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
 Frame = +1

Query: 301 LLELVEAAQK-----KRKNATSSGQGSVTH-LFAGEFLKEAKP 411
           LL++V  A K      +   +  G G+ T  L A EFLKEAKP
Sbjct: 71  LLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKP 113