BLASTX nr result

ID: Coptis25_contig00006612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006612
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256...   187   3e-45
ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-40
ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like iso...   168   1e-39
ref|XP_002512472.1| conserved hypothetical protein [Ricinus comm...   168   1e-39
ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycin...   162   1e-37

>ref|XP_002283567.1| PREDICTED: uncharacterized protein LOC100256314 isoform 1 [Vitis
           vinifera] gi|359487500|ref|XP_003633604.1| PREDICTED:
           uncharacterized protein LOC100256314 isoform 2 [Vitis
           vinifera] gi|296089710|emb|CBI39529.3| unnamed protein
           product [Vitis vinifera]
          Length = 125

 Score =  187 bits (474), Expect = 3e-45
 Identities = 88/120 (73%), Positives = 108/120 (90%)
 Frame = -2

Query: 697 SSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVEIAVAVIVDGSYNLKIDTQHL 518
           SSA+K G LV+LQDL P+SPF K GASLRV GKLQ++SVE A+A+++DGS NLKI+TQHL
Sbjct: 3   SSAVKSGALVSLQDLQPSSPFFKQGASLRVTGKLQEYSVETAIAIVIDGSANLKINTQHL 62

Query: 517 RNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRRFQGEHMSD 338
           R+ +FR GSIYQFIGELLI+PD EA+LQAR+GRNVDGIDLNLY+QSLQL+R+FQ +HM+D
Sbjct: 63  RDLTFRAGSIYQFIGELLIQPDNEAILQARVGRNVDGIDLNLYHQSLQLVRQFQADHMND 122


>ref|XP_002330234.1| predicted protein [Populus trichocarpa] gi|222871690|gb|EEF08821.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  171 bits (433), Expect = 2e-40
 Identities = 80/118 (67%), Positives = 105/118 (88%)
 Frame = -2

Query: 691 AIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVEIAVAVIVDGSYNLKIDTQHLRN 512
           AIK G LVTL++L+P+SPF K GAS+RV GKLQ+++VE A+AV+ DG+  LKIDTQHLR+
Sbjct: 5   AIKHGELVTLEELNPSSPFFKQGASVRVTGKLQEYTVETAIAVVADGNATLKIDTQHLRD 64

Query: 511 FSFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRRFQGEHMSD 338
            SFR+GS+YQFIGELLI+PD+EA+LQAR+GR  DGIDL+LY+QSLQLLR+FQ +H+++
Sbjct: 65  ISFRIGSVYQFIGELLIQPDSEAILQARVGRIADGIDLSLYHQSLQLLRQFQADHLNN 122


>ref|XP_004144770.1| PREDICTED: CST complex subunit TEN1-like isoform 1 [Cucumis
           sativus] gi|449454055|ref|XP_004144771.1| PREDICTED: CST
           complex subunit TEN1-like isoform 2 [Cucumis sativus]
           gi|449490870|ref|XP_004158731.1| PREDICTED: CST complex
           subunit TEN1-like isoform 1 [Cucumis sativus]
           gi|449490872|ref|XP_004158732.1| PREDICTED: CST complex
           subunit TEN1-like isoform 2 [Cucumis sativus]
          Length = 126

 Score =  168 bits (426), Expect = 1e-39
 Identities = 83/119 (69%), Positives = 103/119 (86%), Gaps = 1/119 (0%)
 Frame = -2

Query: 694 SAIKPGILVTLQDL-HPTSPFLKNGASLRVVGKLQDFSVEIAVAVIVDGSYNLKIDTQHL 518
           SAIK G LV+L+DL HP+S F K+GASLRV GKL ++SVE A+A+IVDG+ NLKIDTQHL
Sbjct: 4   SAIKSGALVSLKDLMHPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHL 63

Query: 517 RNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRRFQGEHMS 341
              S R+GSIYQFIGELL++ D EA+L+AR+GRNVDGIDLNLY+QSLQLLR+FQ +H++
Sbjct: 64  IELSIRIGSIYQFIGELLVQSDNEAILKARVGRNVDGIDLNLYHQSLQLLRQFQADHLN 122


>ref|XP_002512472.1| conserved hypothetical protein [Ricinus communis]
           gi|223548433|gb|EEF49924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score =  168 bits (425), Expect = 1e-39
 Identities = 80/116 (68%), Positives = 100/116 (86%)
 Frame = -2

Query: 691 AIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVEIAVAVIVDGSYNLKIDTQHLRN 512
           AIK G LVTL DLHP+SPF K G+S+R+ GKLQ+++V+ A+A I DG+  LKIDTQHL +
Sbjct: 5   AIKHGELVTLLDLHPSSPFFKQGSSIRITGKLQEYTVDTAIARIADGNAILKIDTQHLSD 64

Query: 511 FSFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRRFQGEHM 344
            SFR+GS+YQFIGELLI+PD EA+LQAR+GRNVDGIDLNLY QSLQLLR+F+ +H+
Sbjct: 65  LSFRIGSVYQFIGELLIQPDDEAILQARVGRNVDGIDLNLYNQSLQLLRQFEADHI 120


>ref|NP_001236503.1| uncharacterized protein LOC100305519 [Glycine max]
           gi|255625773|gb|ACU13231.1| unknown [Glycine max]
          Length = 126

 Score =  162 bits (409), Expect = 1e-37
 Identities = 77/120 (64%), Positives = 98/120 (81%)
 Frame = -2

Query: 697 SSAIKPGILVTLQDLHPTSPFLKNGASLRVVGKLQDFSVEIAVAVIVDGSYNLKIDTQHL 518
           S  IK G LV+LQDL P+SPF K GASLR+ GKL ++S+E  +A I+DG   LK+ T+HL
Sbjct: 3   SLEIKSGALVSLQDLRPSSPFFKQGASLRITGKLHEYSIETGLATIIDGDDILKVSTKHL 62

Query: 517 RNFSFRVGSIYQFIGELLIKPDTEAVLQARIGRNVDGIDLNLYYQSLQLLRRFQGEHMSD 338
           R+ +F+VGS+YQFIGELLI+PD E VLQAR+GRNVDGIDLNLY+QSL LLR+FQ  H+++
Sbjct: 63  RDLTFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQTNHLNN 122


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