BLASTX nr result
ID: Coptis25_contig00006608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006608
(1708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38228.3| unnamed protein product [Vitis vinifera] 439 e-120
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g... 439 e-120
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera] 439 e-120
ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g... 378 e-102
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g... 375 e-101
>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 439 bits (1129), Expect = e-120
Identities = 236/422 (55%), Positives = 299/422 (70%), Gaps = 2/422 (0%)
Frame = -3
Query: 1544 QGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVDRISALDAQR-QQEI 1368
Q + P+ +L + V P I S+ Y S +RPL +RIS LD + QQE+
Sbjct: 182 QQSLPDPRVDLFQQRGSVLPPIPSNTI-----SYASGSRPLSINTERISTLDPKTSQQEV 236
Query: 1367 VFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRYS 1188
+FK+LCSND V+ALQ+E GA+ISVG+ V+E DER++T++A ENPESRYS
Sbjct: 237 IFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS 296
Query: 1187 PAQNAVVRVFTRSVEVGIEKGLDA-SKGASVSARLLVPPNQVGCLMGKGGTIIQEMRKLT 1011
PAQN V+ VF RS+E GIEKGLD+ SKG+ VSARL+VP NQVGCLMGKGGTII EMRK +
Sbjct: 297 PAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKAS 356
Query: 1010 NTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDNLFPNKTMNXXXXXX 831
IRIIG D+V K SENDQVVQI G+ NVQ+ ++H+TGRLRDNLFP+KT+N
Sbjct: 357 GAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAG--- 413
Query: 830 XXXXXXXXGIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSH 651
I SSS ++E SPYGR+R+ S L+ S+G+ + R T L +DHLGLSH
Sbjct: 414 ---------IRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSH 464
Query: 650 SLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTVEILVPE 471
SLDH SP+LW SQT+ G N R +++G ++ GSG K+AI+TNTTVEI++PE
Sbjct: 465 SLDHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTVEIVIPE 514
Query: 470 QVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSLLQAFIL 291
V+GSVYGENG NL RLR+ISGAKV++H+PRPGTS+ IV+ISGTPD+TQAAQSLLQAFI
Sbjct: 515 NVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 574
Query: 290 SG 285
+G
Sbjct: 575 TG 576
>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 439 bits (1129), Expect = e-120
Identities = 236/422 (55%), Positives = 299/422 (70%), Gaps = 2/422 (0%)
Frame = -3
Query: 1544 QGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVDRISALDAQR-QQEI 1368
Q + P+ +L + V P I S+ Y S +RPL +RIS LD + QQE+
Sbjct: 245 QQSLPDPRVDLFQQRGSVLPPIPSNTI-----SYASGSRPLSINTERISTLDPKTSQQEV 299
Query: 1367 VFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRYS 1188
+FK+LCSND V+ALQ+E GA+ISVG+ V+E DER++T++A ENPESRYS
Sbjct: 300 IFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS 359
Query: 1187 PAQNAVVRVFTRSVEVGIEKGLDA-SKGASVSARLLVPPNQVGCLMGKGGTIIQEMRKLT 1011
PAQN V+ VF RS+E GIEKGLD+ SKG+ VSARL+VP NQVGCLMGKGGTII EMRK +
Sbjct: 360 PAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKAS 419
Query: 1010 NTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDNLFPNKTMNXXXXXX 831
IRIIG D+V K SENDQVVQI G+ NVQ+ ++H+TGRLRDNLFP+KT+N
Sbjct: 420 GAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAG--- 476
Query: 830 XXXXXXXXGIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSH 651
I SSS ++E SPYGR+R+ S L+ S+G+ + R T L +DHLGLSH
Sbjct: 477 ---------IRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSH 527
Query: 650 SLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTVEILVPE 471
SLDH SP+LW SQT+ G N R +++G ++ GSG K+AI+TNTTVEI++PE
Sbjct: 528 SLDHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTVEIVIPE 577
Query: 470 QVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSLLQAFIL 291
V+GSVYGENG NL RLR+ISGAKV++H+PRPGTS+ IV+ISGTPD+TQAAQSLLQAFI
Sbjct: 578 NVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 637
Query: 290 SG 285
+G
Sbjct: 638 TG 639
Score = 89.4 bits (220), Expect = 3e-15
Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 12/177 (6%)
Frame = -3
Query: 1370 IVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRY 1191
+ F+LLC V+ LQ +TGA I V S S +D RV+ V A + R
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 1190 -----------SPAQNAVVRVFTRSVEVG-IEKGLDASKGASVSARLLVPPNQVGCLMGK 1047
S AQ AV+RVF R +EV + G+ G VS RLL +QVG ++GK
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPP--GGVVSCRLLAETSQVGSVIGK 168
Query: 1046 GGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD 876
GG +++++R+ + + I+++ +K+ + D++V+I GD+ V+ A+ V+ RL+D
Sbjct: 169 GGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQD 225
>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 439 bits (1129), Expect = e-120
Identities = 236/422 (55%), Positives = 299/422 (70%), Gaps = 2/422 (0%)
Frame = -3
Query: 1544 QGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVDRISALDAQR-QQEI 1368
Q + P+ +L + V P I S+ Y S +RPL +RIS LD + QQE+
Sbjct: 166 QQSLPDPRVDLFQQRGSVLPPIPSNTI-----SYASGSRPLSINTERISTLDPKTSQQEV 220
Query: 1367 VFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSAKENPESRYS 1188
+FK+LCSND V+ALQ+E GA+ISVG+ V+E DER++T++A ENPESRYS
Sbjct: 221 IFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS 280
Query: 1187 PAQNAVVRVFTRSVEVGIEKGLDA-SKGASVSARLLVPPNQVGCLMGKGGTIIQEMRKLT 1011
PAQN V+ VF RS+E GIEKGLD+ SKG+ VSARL+VP NQVGCLMGKGGTII EMRK +
Sbjct: 281 PAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKAS 340
Query: 1010 NTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDNLFPNKTMNXXXXXX 831
IRIIG D+V K SENDQVVQI G+ NVQ+ ++H+TGRLRDNLFP+KT+N
Sbjct: 341 GAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAG--- 397
Query: 830 XXXXXXXXGIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSH 651
I SSS ++E SPYGR+R+ S L+ S+G+ + R T L +DHLGLSH
Sbjct: 398 ---------IRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSH 448
Query: 650 SLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKTAIVTNTTVEILVPE 471
SLDH SP+LW SQT+ G N R +++G ++ GSG K+AI+TNTTVEI++PE
Sbjct: 449 SLDHPTSPRLWPSQTVTGVNPR----------NIKGGIELGSGSKSAIITNTTVEIVIPE 498
Query: 470 QVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPDQTQAAQSLLQAFIL 291
V+GSVYGENG NL RLR+ISGAKV++H+PRPGTS+ IV+ISGTPD+TQAAQSLLQAFI
Sbjct: 499 NVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFIH 558
Query: 290 SG 285
+G
Sbjct: 559 TG 560
>ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 710
Score = 378 bits (970), Expect = e-102
Identities = 232/496 (46%), Positives = 291/496 (58%), Gaps = 56/496 (11%)
Frame = -3
Query: 1604 EVYGELPHRSSLVQPTI-------GTVQGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGD 1446
E LP +S P + GT+ E L RSS + SS
Sbjct: 239 EALDALPRATSTAAPRVTLTAAPRGTLTAVQHETVDHLLLRSSALSTLSSSS------NS 292
Query: 1445 YTSRNRPLPTEVDRISALDAQR-QQEIVFKLLCSNDSXXXXXXXXXXXVRALQDETGATI 1269
Y +R LPTEV+R+S+L+ + +QE+ F++LCSND VRALQ ETGATI
Sbjct: 293 YATRIHSLPTEVNRVSSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATI 352
Query: 1268 SVGSSVSEADERVVTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDA--SKGASVS 1095
S+G +V+E ++R++T++A ENPESRYSPAQ A V VF+RS+EVG EKGLD+ +KG+ V+
Sbjct: 353 SIGPAVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVT 412
Query: 1094 ARLLVPPNQVGCLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNV 915
RL+VP +QVGCL+GKGG I+ EMRK T IRIIG D+V K S+NDQVVQI G+ +V
Sbjct: 413 VRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 472
Query: 914 QNAVFHVTGRLRDNLFPNKTMNXXXXXXXXXXXXXXGIYSSSTIHESSPYGR------LR 753
Q+A+++ GRLRDNLF + T N SS ++SPYGR L
Sbjct: 473 QDALYNAMGRLRDNLFVS-TQNSAGTRSL-----------SSLRVDTSPYGRQQDVVPLG 520
Query: 752 EQTSPALYPSLGLHRNIDRQTMLAHGIDHLGLSHSLDHSRSPQLWTSQ------------ 609
Q PA SL H A GIDHLGLS +LDH SP LWT
Sbjct: 521 SQLPPATSHSLSRHT-------FAQGIDHLGLSRNLDHPSSPGLWTRNLDRPSSPGLWTR 573
Query: 608 ----------------------------TIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKT 513
T+ G NSRG+ D GLTS +G L+ SG K+
Sbjct: 574 NLDRPSSPGLWTRNLDHRPSSPGLWAPPTVAGINSRGINDFSLGLTSRKGGLELVSGSKS 633
Query: 512 AIVTNTTVEILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPD 333
AIVTNT VEI+VP+ + VYGENG+NL RLRQISGA V +H+PRPGTS+ I+VISGTPD
Sbjct: 634 AIVTNTIVEIVVPDDTIDCVYGENGSNLARLRQISGANVVVHEPRPGTSDRIIVISGTPD 693
Query: 332 QTQAAQSLLQAFILSG 285
+TQAAQSLLQAFILSG
Sbjct: 694 ETQAAQSLLQAFILSG 709
Score = 69.7 bits (169), Expect = 2e-09
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Frame = -3
Query: 1370 IVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTVSA-------- 1215
+ F+LLC+ ++ LQ TGA I + + E +R++ V A
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 1214 --KENPESRYSPAQNAVVRVFTRSVEVGI-EKGLDASKGASVSARLLVPPNQVGCLMGKG 1044
+ S AQ A+++VF R + G ++ +D +S RL+ Q G ++GKG
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRV-MSCRLVADAAQAGSVIGKG 163
Query: 1043 GTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRD 876
G +++ ++K T IR++ D + S +D++++I G + +V+ A+ V+ RL+D
Sbjct: 164 GKVVERIKKETGCKIRVL-TDDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQD 218
>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 375 bits (963), Expect = e-101
Identities = 211/436 (48%), Positives = 283/436 (64%), Gaps = 2/436 (0%)
Frame = -3
Query: 1586 PHRSSLVQPTIGTVQGTFPEVYGELPHRSSLVQPTIGSSLDYPSRGDYTSRNRPLPTEVD 1407
P V+P + T P+++ + + + V P + SS + + G ++ L + D
Sbjct: 236 PSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHS-----LSIDAD 290
Query: 1406 RISALDAQ-RQQEIVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERV 1230
+ +D QQ++VFK+LC+ND VRALQ+E+GAT+SVG SV+ DER+
Sbjct: 291 MLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERL 350
Query: 1229 VTVSAKENPESRYSPAQNAVVRVFTRSVEVGIEKGLDAS-KGASVSARLLVPPNQVGCLM 1053
++++A EN ESRYSPAQ AVV VF+RSV+V IEK ++S KG+ V ARL+VP NQVGC++
Sbjct: 351 ISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVL 410
Query: 1052 GKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRLRDN 873
GKGG II E+RK+T T IRII D+V +E+D++VQI G+ NVQ+A+++VTGRLRDN
Sbjct: 411 GKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDN 470
Query: 872 LFPNKTMNXXXXXXXXXXXXXXGIYSSSTIHESSPYGRLREQTSPALYPSLGLHRNIDRQ 693
LF + N +S E+SPYGR+R+ +G Q
Sbjct: 471 LFSSVLSNSGTRNGG----------GTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQ 520
Query: 692 TMLAHGIDHLGLSHSLDHSRSPQLWTSQTIGGGNSRGMTDSGRGLTSLRGSLDFGSGGKT 513
A D LGLSHSLD SP LW Q++ G +SR ++D+GRGL S R + GSG KT
Sbjct: 521 HSTAQSSDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKT 580
Query: 512 AIVTNTTVEILVPEQVLGSVYGENGTNLNRLRQISGAKVSIHDPRPGTSETIVVISGTPD 333
AIVTNTTVEI+VP+ V+ VYGENGTNL RLRQISGAKV +H+P P TS+ ++VISGTPD
Sbjct: 581 AIVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISGTPD 640
Query: 332 QTQAAQSLLQAFILSG 285
+TQAAQSLL AFIL+G
Sbjct: 641 ETQAAQSLLHAFILTG 656
Score = 77.8 bits (190), Expect = 8e-12
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Frame = -3
Query: 1370 IVFKLLCSNDSXXXXXXXXXXXVRALQDETGATISVGSSVSEADERVVTV---------- 1221
+ F++LC ++ LQ TG I V + SE+ +RVVTV
Sbjct: 53 VAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRV 112
Query: 1220 -----SAKENPESRYSPAQNAVVRVFTRSVEVGIE-KGLDASKGASVS-ARLLVPPNQVG 1062
S E S AQ +++VF R +EV E +G++ V RLL QVG
Sbjct: 113 FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVG 172
Query: 1061 CLMGKGGTIIQEMRKLTNTAIRIIGGDKVSKSNSENDQVVQIVGDLRNVQNAVFHVTGRL 882
++GKGG +++++RK + IR++ DK+ +D++++I GD+ ++ A+ V+ RL
Sbjct: 173 SVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRL 231
Query: 881 RD 876
+D
Sbjct: 232 QD 233