BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006600
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [S...   147   1e-33
ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]...   145   4e-33
gb|ACF81148.1| unknown [Zea mays] gi|195637264|gb|ACG38100.1| sm...   145   4e-33
ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleo...   145   6e-33
ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [S...   145   6e-33

>ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
           gi|241921557|gb|EER94701.1| hypothetical protein
           SORBIDRAFT_01g032730 [Sorghum bicolor]
          Length = 81

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/81 (86%), Positives = 80/81 (98%)
 Frame = -2

Query: 521 MSRSGQPPDLKKYMDKQLQIKLDANRLVVGTLRGFDQFMNLVLENTIEMNGNDKNDIGMV 342
           MSRSGQPPDLKKYMDK+LQIKL+ANR+V+GTLRGFDQFMNLV++NT+E+NGNDK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60

Query: 341 VIRGNSVVMIEALEPVARNQQ 279
           VIRGNSVVMIEALEPVA++QQ
Sbjct: 61  VIRGNSVVMIEALEPVAKSQQ 81


>ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
           gi|194698570|gb|ACF83369.1| unknown [Zea mays]
           gi|195609740|gb|ACG26700.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|195621638|gb|ACG32649.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|195656303|gb|ACG47619.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|414867200|tpg|DAA45757.1| TPA: Small nuclear
           ribonucleoprotein G [Zea mays]
          Length = 80

 Score =  145 bits (366), Expect = 4e-33
 Identities = 69/80 (86%), Positives = 79/80 (98%)
 Frame = -2

Query: 521 MSRSGQPPDLKKYMDKQLQIKLDANRLVVGTLRGFDQFMNLVLENTIEMNGNDKNDIGMV 342
           MSRSGQPPDLKKYMDK+LQIK++ANR+V+GTLRGFDQFMNLV++NT+E+NGNDK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60

Query: 341 VIRGNSVVMIEALEPVARNQ 282
           VIRGNSVVMIEALEPVAR+Q
Sbjct: 61  VIRGNSVVMIEALEPVARSQ 80


>gb|ACF81148.1| unknown [Zea mays] gi|195637264|gb|ACG38100.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|195645546|gb|ACG42241.1| small nuclear
           ribonucleoprotein G [Zea mays]
           gi|413955444|gb|AFW88093.1| Small nuclear
           ribonucleoprotein G [Zea mays]
          Length = 80

 Score =  145 bits (366), Expect = 4e-33
 Identities = 69/80 (86%), Positives = 79/80 (98%)
 Frame = -2

Query: 521 MSRSGQPPDLKKYMDKQLQIKLDANRLVVGTLRGFDQFMNLVLENTIEMNGNDKNDIGMV 342
           MSRSGQPPDLKKYMDK+LQIKL+ANR+V+GTLRGFDQFMNLV++NT+E+NGNDK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNDKTDIGMV 60

Query: 341 VIRGNSVVMIEALEPVARNQ 282
           VIRGNSVVMIEALEPVA++Q
Sbjct: 61  VIRGNSVVMIEALEPVAKSQ 80


>ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
           [Brachypodium distachyon]
          Length = 80

 Score =  145 bits (365), Expect = 6e-33
 Identities = 67/80 (83%), Positives = 80/80 (100%)
 Frame = -2

Query: 521 MSRSGQPPDLKKYMDKQLQIKLDANRLVVGTLRGFDQFMNLVLENTIEMNGNDKNDIGMV 342
           MSRSGQPPDLKKYMDK+LQIKL+ANR+V+GTLRGFDQFMNLV++NT+E+NGND+NDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDRNDIGMV 60

Query: 341 VIRGNSVVMIEALEPVARNQ 282
           V+RGNSVVMIEALEP+A++Q
Sbjct: 61  VLRGNSVVMIEALEPIAKSQ 80


>ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
           gi|241926546|gb|EER99690.1| hypothetical protein
           SORBIDRAFT_02g039000 [Sorghum bicolor]
          Length = 80

 Score =  145 bits (365), Expect = 6e-33
 Identities = 69/80 (86%), Positives = 79/80 (98%)
 Frame = -2

Query: 521 MSRSGQPPDLKKYMDKQLQIKLDANRLVVGTLRGFDQFMNLVLENTIEMNGNDKNDIGMV 342
           MSRSGQPPDLKKYMDK+LQIKL+ANR+V+GTLRGFDQFMNLV++NT+E+NGN+KNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60

Query: 341 VIRGNSVVMIEALEPVARNQ 282
           VIRGNSVVMIEALEPVA+ Q
Sbjct: 61  VIRGNSVVMIEALEPVAKAQ 80