BLASTX nr result
ID: Coptis25_contig00006599
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006599
(1975 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig... 650 0.0
emb|CBI38350.3| unnamed protein product [Vitis vinifera] 648 0.0
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera] 644 0.0
ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein lig... 640 0.0
ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein lig... 640 0.0
>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
vinifera]
Length = 652
Score = 650 bits (1676), Expect(2) = 0.0
Identities = 318/553 (57%), Positives = 387/553 (69%), Gaps = 19/553 (3%)
Frame = -3
Query: 1973 MDSEELSDDYMD--SVEDFNNEEENVTXXXXXXXXXXXXXYPSDD-DEFSHEDCGQNHTV 1803
M+SE+ D D S++DF + E SDD D+ + QN+T+
Sbjct: 66 MESEDDMHDANDAESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTI 125
Query: 1802 LTEEEIKACQDEAITEVESVLSLPRDSAIVLLCEYNWRVSNVTDDWFADEDKVRKKVGLL 1623
LTE +I+ Q++ IT + +VLS+PR SA +LL Y W VS V D+WFADE+KVRK VGLL
Sbjct: 126 LTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLL 185
Query: 1622 VKPVVYYLPDKKINCRICFDDFCPRDMVS-VACGHLFCKLCWKGYITTSINDGPGCLTLR 1446
KPVV + +++ C ICF+++ PRD +S ACGH FC CW GY +T+I DGPGCL LR
Sbjct: 186 EKPVVQFPNARELTCGICFENY-PRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLR 244
Query: 1445 CPEIKCPAIVGQDIVDKLVSGQEKKKYSRYLLRSYVEINTNVKWCPAPDCDNAVEFVAGS 1266
CP+ C A VGQD+++ L S ++K+KYSRY LRSY+E N KWCPAP CD AV+F+ GS
Sbjct: 245 CPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGS 304
Query: 1265 GSYDVSCNCKCNFCWNCLEETHRPVGCDTVATWILKNSAESENVTWILANSKPCPKCKRP 1086
GSYDVSC C +FCWNC EE HRPV C TVA WILKNSAESEN+ WILANSKPCPKCKRP
Sbjct: 305 GSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRP 364
Query: 1085 IQKNAGCMHMTCTPPCKNEFCWLCLGSWETHGEATGGFYACNRYXXXXXXXXXXXXXXXX 906
I+KN GCMH+TCTPPCK EFCWLCLG+W HGE TGGFYACNRY
Sbjct: 365 IEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRR 424
Query: 905 EMAKSIIEKYTHYYERWEANHKSRTKAVADLHQAETVHINNIRDGHHESEVQVKFITEAW 726
+MAK+ +E+YTHYYERW N SR KA+ADL Q +TV+I + D + E Q+KFITEAW
Sbjct: 425 DMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAW 484
Query: 725 AQIIECRRVLKWTYAYGYYLPEDEPAKRQFFEYLQGDAEFWLERLHECAEKGLKRFLDAK 546
QI+ECRRVLKWTYAYGYYLPE E AKRQFFEYLQG+AE LERLH+CAEK L+ +LDA
Sbjct: 485 LQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDAD 544
Query: 545 EP-EDYQEFRTKLINLTSVTKKYFANLVRALENDLADVDL--------------GENCEL 411
P +D+ EFRTKL LTSVT+ YF NLVRALEN L+DVD G + +
Sbjct: 545 GPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKA 604
Query: 410 QGGRSEEPASKSS 372
+GGR + +S+SS
Sbjct: 605 RGGRGKGTSSRSS 617
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 322 TYPSRKSATNCQICKQHR 269
T+ + +SAT CQIC+Q R
Sbjct: 635 TFANVRSATICQICQQRR 652
>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 648 bits (1671), Expect(2) = 0.0
Identities = 313/540 (57%), Positives = 381/540 (70%), Gaps = 17/540 (3%)
Frame = -3
Query: 1940 DSVEDFNNEEENVTXXXXXXXXXXXXXYPSDD-DEFSHEDCGQNHTVLTEEEIKACQDEA 1764
+S++DF + E SDD D+ + QN+T+LTE +I+ Q++
Sbjct: 8 ESLDDFYSGETAADSDDLDAADYEFIDNDSDDSDDLTSHRYQQNYTILTEADIRQRQEDD 67
Query: 1763 ITEVESVLSLPRDSAIVLLCEYNWRVSNVTDDWFADEDKVRKKVGLLVKPVVYYLPDKKI 1584
IT + +VLS+PR SA +LL Y W VS V D+WFADE+KVRK VGLL KPVV + +++
Sbjct: 68 ITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRKAVGLLEKPVVQFPNAREL 127
Query: 1583 NCRICFDDFCPRDMVS-VACGHLFCKLCWKGYITTSINDGPGCLTLRCPEIKCPAIVGQD 1407
C ICF+++ PRD +S ACGH FC CW GY +T+I DGPGCL LRCP+ C A VGQD
Sbjct: 128 TCGICFENY-PRDRISSAACGHPFCGTCWAGYTSTAITDGPGCLMLRCPDPTCGAAVGQD 186
Query: 1406 IVDKLVSGQEKKKYSRYLLRSYVEINTNVKWCPAPDCDNAVEFVAGSGSYDVSCNCKCNF 1227
+++ L S ++K+KYSRY LRSY+E N KWCPAP CD AV+F+ GSGSYDVSC C +F
Sbjct: 187 MINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSF 246
Query: 1226 CWNCLEETHRPVGCDTVATWILKNSAESENVTWILANSKPCPKCKRPIQKNAGCMHMTCT 1047
CWNC EE HRPV C TVA WILKNSAESEN+ WILANSKPCPKCKRPI+KN GCMH+TCT
Sbjct: 247 CWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCT 306
Query: 1046 PPCKNEFCWLCLGSWETHGEATGGFYACNRYXXXXXXXXXXXXXXXXEMAKSIIEKYTHY 867
PPCK EFCWLCLG+W HGE TGGFYACNRY +MAK+ +E+YTHY
Sbjct: 307 PPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEAEKRRDMAKNSLERYTHY 366
Query: 866 YERWEANHKSRTKAVADLHQAETVHINNIRDGHHESEVQVKFITEAWAQIIECRRVLKWT 687
YERW N SR KA+ADL Q +TV+I + D + E Q+KFITEAW QI+ECRRVLKWT
Sbjct: 367 YERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFITEAWLQIVECRRVLKWT 426
Query: 686 YAYGYYLPEDEPAKRQFFEYLQGDAEFWLERLHECAEKGLKRFLDAKEP-EDYQEFRTKL 510
YAYGYYLPE E AKRQFFEYLQG+AE LERLH+CAEK L+ +LDA P +D+ EFRTKL
Sbjct: 427 YAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTYLDADGPSKDFNEFRTKL 486
Query: 509 INLTSVTKKYFANLVRALENDLADVDL--------------GENCELQGGRSEEPASKSS 372
LTSVT+ YF NLVRALEN L+DVD G + + +GGR + +S+SS
Sbjct: 487 AGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKARGGRGKGTSSRSS 546
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 322 TYPSRKSATNCQICKQHR 269
T+ + +SAT CQIC+Q R
Sbjct: 564 TFANVRSATICQICQQRR 581
>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
Length = 588
Score = 644 bits (1662), Expect(2) = 0.0
Identities = 307/503 (61%), Positives = 369/503 (73%), Gaps = 19/503 (3%)
Frame = -3
Query: 1823 CG---QNHTVLTEEEIKACQDEAITEVESVLSLPRDSAIVLLCEYNWRVSNVTDDWFADE 1653
CG QN+T+LTE +I+ Q++ IT + +VLS+PR SA +LL Y W VS V D+WFADE
Sbjct: 52 CGGLMQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADE 111
Query: 1652 DKVRKKVGLLVKPVVYYLPDKKINCRICFDDFCPRDMVS-VACGHLFCKLCWKGYITTSI 1476
+KVRK VGLL KPVV + +++ C ICF+++ PRD +S ACGH FC CW GY +T+I
Sbjct: 112 EKVRKAVGLLEKPVVQFPNARELTCGICFENY-PRDRISSAACGHPFCGTCWAGYTSTAI 170
Query: 1475 NDGPGCLTLRCPEIKCPAIVGQDIVDKLVSGQEKKKYSRYLLRSYVEINTNVKWCPAPDC 1296
DGPGCL LRCP+ C A VGQD+++ L S ++K+KYSRY LRSY+E N KWCPAP C
Sbjct: 171 TDGPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGC 230
Query: 1295 DNAVEFVAGSGSYDVSCNCKCNFCWNCLEETHRPVGCDTVATWILKNSAESENVTWILAN 1116
D AV+F+ GSGSYDVSC C +FCWNC EE HRPV C TVA WILKNSAESEN+ WILAN
Sbjct: 231 DYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILAN 290
Query: 1115 SKPCPKCKRPIQKNAGCMHMTCTPPCKNEFCWLCLGSWETHGEATGGFYACNRYXXXXXX 936
SKPCPKCKRPI+KN GCMH+TCTPPCK EFCWLCLG+W HGE TGGFYACNRY
Sbjct: 291 SKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQE 350
Query: 935 XXXXXXXXXXEMAKSIIEKYTHYYERWEANHKSRTKAVADLHQAETVHINNIRDGHHESE 756
+MAK+ +E+YTHYYERW N SR KA+ADL Q +TV+I + D + E
Sbjct: 351 GVYDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPE 410
Query: 755 VQVKFITEAWAQIIECRRVLKWTYAYGYYLPEDEPAKRQFFEYLQGDAEFWLERLHECAE 576
Q+KFITEAW QI+ECRRVLKWTYAYGYYLPE E AKRQFFEYLQG+AE LERLH+CAE
Sbjct: 411 SQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAE 470
Query: 575 KGLKRFLDAKEP-EDYQEFRTKLINLTSVTKKYFANLVRALENDLADVDL---------- 429
K L+ +LDA P +D+ EFRTKL LTSVT+ YF NLVRALEN L+DVD
Sbjct: 471 KELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASS 530
Query: 428 ----GENCELQGGRSEEPASKSS 372
G + + +GGR + +S+SS
Sbjct: 531 KSLGGGSSKARGGRGKGTSSRSS 553
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 322 TYPSRKSATNCQICKQHR 269
T+ + +SAT CQIC+Q R
Sbjct: 571 TFANVRSATICQICQQRR 588
>ref|XP_004138892.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Cucumis
sativus]
Length = 597
Score = 640 bits (1650), Expect(2) = 0.0
Identities = 312/555 (56%), Positives = 382/555 (68%), Gaps = 22/555 (3%)
Frame = -3
Query: 1970 DSEELSDDYMDSVEDF----NNEEENVTXXXXXXXXXXXXXYPSDDDE----FSHEDCGQ 1815
D+ + DD +D+ EDF +++ + SDD + + H+ Q
Sbjct: 11 DAHDDDDDSVDNEEDFYSGGDDDAAGIDSDDADVGDYEFVDNDSDDSDDMVSYRHQ---Q 67
Query: 1814 NHTVLTEEEIKACQDEAITEVESVLSLPRDSAIVLLCEYNWRVSNVTDDWFADEDKVRKK 1635
N+ +L E +I+ CQ+E IT V +VLS+ + +A +LL YNW VS V D+WFADE+KVR+
Sbjct: 68 NYIILAEADIQQCQEEDITRVSTVLSISKVAASILLRYYNWSVSKVHDEWFADEEKVRRS 127
Query: 1634 VGLLVKPVVYYLPDKKINCRICFDDFCPRDMVSVACGHLFCKLCWKGYITTSINDGPGCL 1455
VGLL KPV+ + + ++ C ICF+ + + S ACGH FC CW GYI+TSINDGPGCL
Sbjct: 128 VGLLQKPVLRHSNELELPCGICFEIYPLDKIQSAACGHPFCNACWTGYISTSINDGPGCL 187
Query: 1454 TLRCPEIKCPAIVGQDIVDKLVSGQEKKKYSRYLLRSYVEINTNVKWCPAPDCDNAVEFV 1275
LRCP+ C A VGQD+++ LVS EKKKY RY +RSYVE N KWCPAP CD AV+F+
Sbjct: 188 MLRCPDPSCGAAVGQDMINLLVSDDEKKKYFRYFVRSYVEDNRKTKWCPAPGCDYAVDFI 247
Query: 1274 AGSGSYDVSCNCKCNFCWNCLEETHRPVGCDTVATWILKNSAESENVTWILANSKPCPKC 1095
GSGSYDV+C C +FCWNC EE HRPV C TVA WILKNSAESEN+ WILANSKPCPKC
Sbjct: 248 VGSGSYDVTCRCSYSFCWNCTEEAHRPVDCVTVARWILKNSAESENMNWILANSKPCPKC 307
Query: 1094 KRPIQKNAGCMHMTCTPPCKNEFCWLCLGSWETHGEATGGFYACNRYXXXXXXXXXXXXX 915
KRPI+KN GCMH+TCTPPCK EFCWLCLG W HGE TGGFYACNRY
Sbjct: 308 KRPIEKNQGCMHLTCTPPCKFEFCWLCLGPWSDHGERTGGFYACNRYETAKQEGVYDDAE 367
Query: 914 XXXEMAKSIIEKYTHYYERWEANHKSRTKAVADLHQAETVHINNIRDGHHESEVQVKFIT 735
EMAK+ +E+YTHYYERW N SR KA+ADLHQ +TVH+ + D + + Q+KFI+
Sbjct: 368 KRREMAKNSLERYTHYYERWATNQSSRQKALADLHQMQTVHLEKLSDIQCQPQSQLKFIS 427
Query: 734 EAWAQIIECRRVLKWTYAYGYYLPEDEPAKRQFFEYLQGDAEFWLERLHECAEKGLKRFL 555
EAW QI+ECRRVLKWTYAYGYYLPE E AKRQFFEYLQG+AE LERLH+CAEK L +L
Sbjct: 428 EAWLQIVECRRVLKWTYAYGYYLPEREHAKRQFFEYLQGEAESGLERLHQCAEKELHAYL 487
Query: 554 DAKE--PEDYQEFRTKLINLTSVTKKYFANLVRALENDLADVD-LGE-----------NC 417
+A + +D+ EFRTKL LTSVT+ YF NLVRALEN L+DVD LG C
Sbjct: 488 NAADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSLGTCSKTSSSKSTGGC 547
Query: 416 ELQGGRSEEPASKSS 372
+GG+ + A + S
Sbjct: 548 RSKGGKGKMSAFRGS 562
Score = 25.8 bits (55), Expect(2) = 0.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 322 TYPSRKSATNCQICKQHR 269
T+ + KSAT CQ+C+Q R
Sbjct: 580 TFANVKSATFCQMCQQRR 597
>ref|XP_003632072.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI7-like [Vitis
vinifera] gi|147800085|emb|CAN64272.1| hypothetical
protein VITISV_008933 [Vitis vinifera]
Length = 587
Score = 640 bits (1652), Expect = 0.0
Identities = 321/585 (54%), Positives = 390/585 (66%), Gaps = 25/585 (4%)
Frame = -3
Query: 1973 MDSEELSDDY--MDSVEDFNNEEENVTXXXXXXXXXXXXXYPSDD-DEFSHEDCGQNHTV 1803
MDSE+ D +DS+EDF + + DD D N+T+
Sbjct: 1 MDSEDDMHDANDVDSLEDFYSGDTAADSDDDNDADYDFDNDSDDDADAIMLHRHQPNYTI 60
Query: 1802 LTEEEIKACQDEAITEVESVLSLPRDSAIVLLCEYNWRVSNVTDDWFADEDKVRKKVGLL 1623
L EE+I Q++ I V +VLS+ SA +LL Y+W VS V D+WFADE +VRK VGLL
Sbjct: 61 LKEEDIHQHQEDDIARVAAVLSIASVSASILLRHYHWSVSKVNDEWFADESRVRKAVGLL 120
Query: 1622 VKPVVYYLPDKKINCRICFDDFCPRDMV-SVACGHLFCKLCWKGYITTSINDGPGCLTLR 1446
+P+V Y K++ C ICF+ + PRDM+ S ACGH FC CW+GYI+TSINDGPGCL LR
Sbjct: 121 EEPLVRYPNAKELTCGICFETY-PRDMIQSAACGHPFCSTCWEGYISTSINDGPGCLMLR 179
Query: 1445 CPEIKCPAIVGQDIVDKLVSGQEKKKYSRYLLRSYVEINTNVKWCPAPDCDNAVEFVAGS 1266
CP+ C A VGQD+++ L S ++ +KYSRYLLRSY+E N KWCPAP C+ AVEFVAGS
Sbjct: 180 CPDPSCRAAVGQDMINLLASDEDNEKYSRYLLRSYIEDNRKTKWCPAPGCEYAVEFVAGS 239
Query: 1265 GSYDVSCNCKCNFCWNCLEETHRPVGCDTVATWILKNSAESENVTWILANSKPCPKCKRP 1086
GSYDV+C C FCWNC EE HRPV C TVA WILKNSAESEN+ WILANSKPCPKCKRP
Sbjct: 240 GSYDVACQCSYGFCWNCTEEAHRPVDCSTVAKWILKNSAESENMNWILANSKPCPKCKRP 299
Query: 1085 IQKNAGCMHMTCTPPCKNEFCWLCLGSWETHGEATGGFYACNRYXXXXXXXXXXXXXXXX 906
I+KN GCMH+TCTPPCK EFCWLCLG+W HGE TGGFYACNRY
Sbjct: 300 IEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRR 359
Query: 905 EMAKSIIEKYTHYYERWEANHKSRTKAVADLHQAETVHINNIRDGHHESEVQVKFITEAW 726
EMAK+ +E+YTHYYERW N SR KA+ADLHQ + V+I + D + E Q+KFITEAW
Sbjct: 360 EMAKNSLERYTHYYERWATNQSSRQKALADLHQMQNVNIEKLSDKQCQPESQLKFITEAW 419
Query: 725 AQIIECRRVLKWTYAYGYYLPEDEPAKRQFFEYLQGDAEFWLERLHECAEKGLKRFLDAK 546
QI+ECRRVLKWTYAYGYYLPE E +RQFFEYLQG+AE LERLH+CAEK L+ +L+
Sbjct: 420 LQIVECRRVLKWTYAYGYYLPEHELPRRQFFEYLQGEAESGLERLHQCAEKELQTYLNVD 479
Query: 545 EPE-DYQEFRTKLINLTSVTKKYFANLVRALENDLADVD-------------LGENCELQ 408
P D+ +FRTKL LTSVT+ YF NLVRALEN L+DVD +G + +
Sbjct: 480 GPSADFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSYGACSRTTSSKSMGGTSKAR 539
Query: 407 GGRSEEPASKSSVAGISQEVQAS*DC-------AVHLSQSQVCHQ 294
GGR + S+SS + + + + C A Q+CHQ
Sbjct: 540 GGRGKGTTSRSSSSNKTPDDSSRWYCEHCATANAKSAYTCQMCHQ 584