BLASTX nr result

ID: Coptis25_contig00006588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006588
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574303.1| PREDICTED: proline dehydrogenase 2, mitochon...    75   2e-16
dbj|BAK02892.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   2e-16
ref|XP_004141603.1| PREDICTED: LOW QUALITY PROTEIN: proline dehy...    72   3e-16
ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|2...    72   3e-16
gb|ACA49508.1| proline dehydrogenase [Cucumis sativus]                 72   3e-16

>ref|XP_003574303.1| PREDICTED: proline dehydrogenase 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 488

 Score = 75.5 bits (184), Expect(2) = 2e-16
 Identities = 37/58 (63%), Positives = 43/58 (74%)
 Frame = +3

Query: 3   KVAAANAQGLGIGMGNPKLQFAQLKGLVDELLFGLRNVGFQVSKYFPYGSVEMVMPIL 176
           ++AAA AQ LGIG G+  LQFAQL G+ D L  GLRN GFQVSKY PYG VE ++P L
Sbjct: 394 QLAAARAQELGIGKGDGNLQFAQLMGMADGLSLGLRNAGFQVSKYLPYGPVEHIIPYL 451



 Score = 35.0 bits (79), Expect(2) = 2e-16
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +1

Query: 169 PYFL*RAEENRGLLSASTLDK*LM 240
           PY + RAEENRGLLSAS+ D+ L+
Sbjct: 449 PYLIRRAEENRGLLSASSFDRHLL 472


>dbj|BAK02892.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 481

 Score = 75.5 bits (184), Expect(2) = 2e-16
 Identities = 37/58 (63%), Positives = 43/58 (74%)
 Frame = +3

Query: 3   KVAAANAQGLGIGMGNPKLQFAQLKGLVDELLFGLRNVGFQVSKYFPYGSVEMVMPIL 176
           ++AAA AQ LGIG G+  LQFAQL G+ D L  GLRN GFQVSKY PYG VE ++P L
Sbjct: 387 QLAAARAQELGIGKGDRNLQFAQLMGMADGLSLGLRNAGFQVSKYLPYGPVEHIIPYL 444



 Score = 34.7 bits (78), Expect(2) = 2e-16
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 169 PYFL*RAEENRGLLSASTLDK*LM 240
           PY + RAEENRGLLSAS  D+ L+
Sbjct: 442 PYLIRRAEENRGLLSASAFDRQLL 465


>ref|XP_004141603.1| PREDICTED: LOW QUALITY PROTEIN: proline dehydrogenase 2,
           mitochondrial-like [Cucumis sativus]
          Length = 492

 Score = 71.6 bits (174), Expect(2) = 3e-16
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +3

Query: 3   KVAAANAQGLGIGMGNPKLQFAQLKGLVDELLFGLRNVGFQVSKYFPYGSVEMVMPIL 176
           K+AA+ A  +GIG    KL+FAQL G+ + L FGLRN GFQVSKY P+G V+MVMP L
Sbjct: 401 KLAASRAYEIGIGKLKQKLEFAQLYGMSEALSFGLRNAGFQVSKYMPFGPVDMVMPYL 458



 Score = 38.1 bits (87), Expect(2) = 3e-16
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +1

Query: 169 PYFL*RAEENRGLLSASTLDK*LM 240
           PY L RAEENRGLLSAS LD+ LM
Sbjct: 456 PYLLRRAEENRGLLSASNLDRELM 479


>ref|XP_002305291.1| predicted protein [Populus trichocarpa] gi|222848255|gb|EEE85802.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 72.4 bits (176), Expect(2) = 3e-16
 Identities = 36/58 (62%), Positives = 41/58 (70%)
 Frame = +3

Query: 3   KVAAANAQGLGIGMGNPKLQFAQLKGLVDELLFGLRNVGFQVSKYFPYGSVEMVMPIL 176
           ++AA  A  LGI  GNPKL+FAQL G+ D L FGL N GF VSKY PYG VE V+P L
Sbjct: 344 RLAATKALDLGIRKGNPKLEFAQLYGMSDALSFGLSNAGFLVSKYMPYGPVEKVIPYL 401



 Score = 37.4 bits (85), Expect(2) = 3e-16
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 169 PYFL*RAEENRGLLSASTLDK*LM 240
           PY L RAEENRGLLS S++DK LM
Sbjct: 399 PYLLRRAEENRGLLSTSSIDKELM 422


>gb|ACA49508.1| proline dehydrogenase [Cucumis sativus]
          Length = 217

 Score = 71.6 bits (174), Expect(2) = 3e-16
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = +3

Query: 3   KVAAANAQGLGIGMGNPKLQFAQLKGLVDELLFGLRNVGFQVSKYFPYGSVEMVMPIL 176
           K+AA+ A  +GIG    KL+FAQL G+ + L FGLRN GFQVSKY P+G V+MVMP L
Sbjct: 126 KLAASRAYEIGIGKLKQKLEFAQLYGMSEALSFGLRNAGFQVSKYMPFGPVDMVMPYL 183



 Score = 38.1 bits (87), Expect(2) = 3e-16
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +1

Query: 169 PYFL*RAEENRGLLSASTLDK*LM 240
           PY L RAEENRGLLSAS LD+ LM
Sbjct: 181 PYLLRRAEENRGLLSASNLDRELM 204


Top