BLASTX nr result

ID: Coptis25_contig00006578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006578
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262699.1| PREDICTED: bark storage protein A [Vitis vin...   355   2e-95
ref|NP_567699.1| phosphorylase family protein [Arabidopsis thali...   291   3e-76
gb|AAM66964.1| unknown [Arabidopsis thaliana]                         291   3e-76
emb|CAB45069.1| putative protein [Arabidopsis thaliana] gi|72692...   291   3e-76
ref|XP_002869722.1| hypothetical protein ARALYDRAFT_492412 [Arab...   290   6e-76

>ref|XP_002262699.1| PREDICTED: bark storage protein A [Vitis vinifera]
            gi|296090373|emb|CBI40192.3| unnamed protein product
            [Vitis vinifera]
          Length = 340

 Score =  355 bits (910), Expect = 2e-95
 Identities = 172/231 (74%), Positives = 201/231 (87%)
 Frame = -2

Query: 1116 NAATATQQMLDLFDISGIIHFGIAGNTNNSLSIGDVTIHKQFAQTGIWDWLKPNGTLYEN 937
            NAA ATQQMLDLFDI GI+HFGIAGN NNS+SIGDVTI KQFA TGIWDWLKPNG L  +
Sbjct: 104  NAAAATQQMLDLFDIRGIVHFGIAGNANNSMSIGDVTIPKQFAHTGIWDWLKPNGILPSD 163

Query: 936  DVAHLDIGNYNVPNGQGMNLLGRIGFSPEQFYSESGQPNTPERIIWANVSRHWLHSAAKL 757
            DVAHLDIG+YNVP G G+NLLGRIG+S EQF+SE+G+P+  + ++WA +S+HWL  AAKL
Sbjct: 164  DVAHLDIGSYNVPKG-GVNLLGRIGYSYEQFFSETGKPDAAQPLVWAKISQHWLRLAAKL 222

Query: 756  EGMELERCLNSSLCLPSEPKLVIGLRGSTADIFLDNAAYREFLAKTFSVSSVDMESAAVV 577
            EGMEL++C+NSS CLP +PKLV+GLRGST++IF+DNAAYR+FL +TF VSSVDMESAAV 
Sbjct: 223  EGMELQQCVNSSNCLPQKPKLVVGLRGSTSNIFVDNAAYRDFLFQTFHVSSVDMESAAVA 282

Query: 576  MTSLSNGFPVIVIRGLSDLAGGQVGHNSIDALGPIAALNTAKVAVQFVKIL 424
            MT+LSNGFPVIVIRGLSDLAGGQ G NSI   GP+AALN AKV VQF++ L
Sbjct: 283  MTTLSNGFPVIVIRGLSDLAGGQAGQNSIRIFGPLAALNAAKVVVQFIRTL 333


>ref|NP_567699.1| phosphorylase family protein [Arabidopsis thaliana]
            gi|26453148|dbj|BAC43650.1| unknown protein [Arabidopsis
            thaliana] gi|28950909|gb|AAO63378.1| At4g24340
            [Arabidopsis thaliana] gi|332659491|gb|AEE84891.1|
            phosphorylase family protein [Arabidopsis thaliana]
          Length = 338

 Score =  291 bits (744), Expect = 3e-76
 Identities = 141/232 (60%), Positives = 178/232 (76%)
 Frame = -2

Query: 1116 NAATATQQMLDLFDISGIIHFGIAGNTNNSLSIGDVTIHKQFAQTGIWDWLKPNGTLYEN 937
            NAA ATQQM+D+F + GI+HFGIAGN NNS+SIGDV+I KQ    G+WDWL P       
Sbjct: 109  NAAAATQQMIDVFSVKGIVHFGIAGNINNSMSIGDVSIPKQITNAGLWDWLNPGKAKGNE 168

Query: 936  DVAHLDIGNYNVPNGQGMNLLGRIGFSPEQFYSESGQPNTPERIIWANVSRHWLHSAAKL 757
            DVA+LD+GNYNVP  QG N LG IG+S E+ YS SG  N+P+++ W N ++ WLH AA L
Sbjct: 169  DVAYLDVGNYNVP--QGNNKLGTIGYSYEELYSVSGHINSPKKVFWINTTQEWLHLAADL 226

Query: 756  EGMELERCLNSSLCLPSEPKLVIGLRGSTADIFLDNAAYREFLAKTFSVSSVDMESAAVV 577
            E MEL +C+N+SLCLP++PK+V+GL+ +TADIF+DNAAYR FL  TF VSS DMES+AV 
Sbjct: 227  EKMELLQCVNASLCLPNKPKVVVGLKAATADIFVDNAAYRNFLYDTFGVSSSDMESSAVA 286

Query: 576  MTSLSNGFPVIVIRGLSDLAGGQVGHNSIDALGPIAALNTAKVAVQFVKILP 421
            MT +SNG+P+IVIRGLSDLAG  VG N++   G +AA NTAK  ++F+K LP
Sbjct: 287  MTCVSNGYPLIVIRGLSDLAG--VGDNTVRKFGSLAATNTAKAVLEFIKKLP 336


>gb|AAM66964.1| unknown [Arabidopsis thaliana]
          Length = 338

 Score =  291 bits (744), Expect = 3e-76
 Identities = 141/232 (60%), Positives = 177/232 (76%)
 Frame = -2

Query: 1116 NAATATQQMLDLFDISGIIHFGIAGNTNNSLSIGDVTIHKQFAQTGIWDWLKPNGTLYEN 937
            NAA ATQQM+D+F + GI+HFGIAGN NNS+SIGDV+I KQ    G+WDWL P       
Sbjct: 109  NAAAATQQMIDVFSVKGIVHFGIAGNINNSMSIGDVSIPKQITNAGLWDWLNPGKAKGNE 168

Query: 936  DVAHLDIGNYNVPNGQGMNLLGRIGFSPEQFYSESGQPNTPERIIWANVSRHWLHSAAKL 757
            DVA+LD+GNYNVP  QG N LG IG+S E+ YS SG  N+P+++ W N ++ WLH AA L
Sbjct: 169  DVAYLDVGNYNVP--QGNNKLGTIGYSYEELYSVSGHINSPKKVFWINTTQEWLHLAADL 226

Query: 756  EGMELERCLNSSLCLPSEPKLVIGLRGSTADIFLDNAAYREFLAKTFSVSSVDMESAAVV 577
            E MEL +C+N+SLCLP++PK+V+GL+ +TADIF+DNAAYR FL  TF VSS DMES+AV 
Sbjct: 227  EKMELLQCVNASLCLPNKPKVVVGLKAATADIFVDNAAYRNFLYDTFGVSSSDMESSAVA 286

Query: 576  MTSLSNGFPVIVIRGLSDLAGGQVGHNSIDALGPIAALNTAKVAVQFVKILP 421
            MT  SNG+P+IVIRGLSDLAG  VG N++   G +AA NTAK  ++F+K LP
Sbjct: 287  MTCASNGYPIIVIRGLSDLAG--VGDNTVRKFGSLAATNTAKAVLEFIKKLP 336


>emb|CAB45069.1| putative protein [Arabidopsis thaliana] gi|7269284|emb|CAB79344.1|
            putative protein [Arabidopsis thaliana]
          Length = 329

 Score =  291 bits (744), Expect = 3e-76
 Identities = 141/232 (60%), Positives = 178/232 (76%)
 Frame = -2

Query: 1116 NAATATQQMLDLFDISGIIHFGIAGNTNNSLSIGDVTIHKQFAQTGIWDWLKPNGTLYEN 937
            NAA ATQQM+D+F + GI+HFGIAGN NNS+SIGDV+I KQ    G+WDWL P       
Sbjct: 100  NAAAATQQMIDVFSVKGIVHFGIAGNINNSMSIGDVSIPKQITNAGLWDWLNPGKAKGNE 159

Query: 936  DVAHLDIGNYNVPNGQGMNLLGRIGFSPEQFYSESGQPNTPERIIWANVSRHWLHSAAKL 757
            DVA+LD+GNYNVP  QG N LG IG+S E+ YS SG  N+P+++ W N ++ WLH AA L
Sbjct: 160  DVAYLDVGNYNVP--QGNNKLGTIGYSYEELYSVSGHINSPKKVFWINTTQEWLHLAADL 217

Query: 756  EGMELERCLNSSLCLPSEPKLVIGLRGSTADIFLDNAAYREFLAKTFSVSSVDMESAAVV 577
            E MEL +C+N+SLCLP++PK+V+GL+ +TADIF+DNAAYR FL  TF VSS DMES+AV 
Sbjct: 218  EKMELLQCVNASLCLPNKPKVVVGLKAATADIFVDNAAYRNFLYDTFGVSSSDMESSAVA 277

Query: 576  MTSLSNGFPVIVIRGLSDLAGGQVGHNSIDALGPIAALNTAKVAVQFVKILP 421
            MT +SNG+P+IVIRGLSDLAG  VG N++   G +AA NTAK  ++F+K LP
Sbjct: 278  MTCVSNGYPLIVIRGLSDLAG--VGDNTVRKFGSLAATNTAKAVLEFIKKLP 327


>ref|XP_002869722.1| hypothetical protein ARALYDRAFT_492412 [Arabidopsis lyrata subsp.
            lyrata] gi|297315558|gb|EFH45981.1| hypothetical protein
            ARALYDRAFT_492412 [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score =  290 bits (742), Expect = 6e-76
 Identities = 139/232 (59%), Positives = 174/232 (75%)
 Frame = -2

Query: 1116 NAATATQQMLDLFDISGIIHFGIAGNTNNSLSIGDVTIHKQFAQTGIWDWLKPNGTLYEN 937
            N A ATQQM+D+F++ GI+HFGIAGN NNS+SIGDV+I KQ    G+WDWL P+      
Sbjct: 107  NGAAATQQMIDVFNVKGIVHFGIAGNMNNSMSIGDVSIPKQITNAGLWDWLNPDKAKGGE 166

Query: 936  DVAHLDIGNYNVPNGQGMNLLGRIGFSPEQFYSESGQPNTPERIIWANVSRHWLHSAAKL 757
            D+ +LD+GNYNVP G G N LG IG+S EQ YS +G+ N PE + W N ++ WLH AA L
Sbjct: 167  DLVYLDVGNYNVPKGDGNNELGSIGYSYEQLYSVTGRINIPENVFWINTTQEWLHLAADL 226

Query: 756  EGMELERCLNSSLCLPSEPKLVIGLRGSTADIFLDNAAYREFLAKTFSVSSVDMESAAVV 577
            E +EL +C+N+SLCLP +PKLV+GL+ +TADIF+DNAAYR FL  TF VSS DMES+AV 
Sbjct: 227  EKIELSQCVNASLCLPKKPKLVVGLKAATADIFVDNAAYRNFLYDTFGVSSSDMESSAVA 286

Query: 576  MTSLSNGFPVIVIRGLSDLAGGQVGHNSIDALGPIAALNTAKVAVQFVKILP 421
            MT  SNG+PVIVIRGLSDLA G  G N++   G +AA NTAK  ++F+K LP
Sbjct: 287  MTCASNGYPVIVIRGLSDLA-GVGGDNTVHKFGSLAATNTAKAVLEFIKKLP 337


Top